Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nfil3

Gene Name Gene ID Reads Annotation
nfil3 ENSDARG00000042977, ENSDARG00000110085 1565 nuclear factor, interleukin 3 regulated [Source:ZFIN;Acc:ZDB-GENE-040822-28]










Genes with expression patterns similar to nfil3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nfil3 ENSDARG00000042977, ENSDARG00000110085 1565 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nuclear factor, interleukin 3 regulated [Source:ZFIN;Acc:ZDB-GENE-040822-28]
2. slc3a2a ENSDARG00000036427, ENSDARG00000112231 2967 2.534 0.822 0.978 - - - - 0.734 - - solute carrier family 3 (amino acid transporter heavy chain), member 2a [Source:ZFIN;Acc:ZDB-GENE-000831-3]
3. arhgef1b ENSDARG00000055837 2330 2.464 0.746 0.957 - - - - 0.761 - - Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
4. cdc42se1 ENSDARG00000023724 3901 1.836 - 0.987 - - - - 0.849 - - CDC42 small effector 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9260]
5. FP236813.1 FP236813.1 1842 1.813 - 0.992 - - - - 0.821 - -
6. chmp2bb ENSDARG00000002190 4629 1.785 - 0.950 - - - - 0.835 - - charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
7. gata5 ENSDARG00000017821 1146 1.774 - 0.967 - - - - 0.807 - - GATA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-980526-340]
8. dse ENSDARG00000017988 2169 1.767 - 0.979 - - - - 0.788 - - dermatan sulfate epimerase [Source:ZFIN;Acc:ZDB-GENE-041001-202]
9. sart3 ENSDARG00000008032 2594 1.753 - 0.986 - 0.767 - - - - - squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
10. ugt1ab 545 1.748 0.807 0.941 - - - - - - - UDP glucuronosyltransferase 1 family a, b
11. zgc:110333 ENSDARG00000040628 3250 1.738 - 0.903 - - - - 0.835 - - zgc:110333 [Source:ZFIN;Acc:ZDB-GENE-050417-331]
12. ak3 ENSDARG00000058226 3160 1.736 - 0.966 - - - - 0.770 - - adenylate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2142]
13. AL929434.1 AL929434.1 3294 1.735 - 0.956 - - - - 0.779 - -
14. cask cask 3384 1.729 - 0.968 - - - - 0.761 - -
15. ttc3 ENSDARG00000086075 2157 1.727 - 0.988 - - - - 0.739 - - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
16. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.725 - 0.980 - - - - - 0.745 - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
17. supt20 ENSDARG00000078658 713 1.717 - 0.991 - 0.726 - - - - - SPT20 homolog, SAGA complex component [Source:ZFIN;Acc:ZDB-GENE-091204-264]
18. ahr2 ENSDARG00000021833 762 1.711 - 0.992 - - - - 0.719 - - aryl hydrocarbon receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990714-16]
19. wls ENSDARG00000009534 8719 1.708 - 0.906 - - - - 0.802 - - wntless Wnt ligand secretion mediator [Source:ZFIN;Acc:ZDB-GENE-040426-2161]
20. zgc:101569 ENSDARG00000038876 1525 1.695 - 0.987 - - - - 0.708 - - zgc:101569 [Source:ZFIN;Acc:ZDB-GENE-041010-72]
21. PELP1 ENSDARG00000079313 5771 1.686 - 0.930 - - - - 0.756 - - proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
22. NID1 NID1 6192 1.682 - 0.942 - - - 0.740 - - -
23. clint1a ENSDARG00000025535 4965 1.677 - 0.922 - - - - 0.755 - - clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
24. pdcd10b ENSDARG00000012591 3395 1.676 - 0.975 - 0.701 - - - - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
25. sec24d ENSDARG00000045946 2395 1.673 - 0.941 - - - - 0.732 - - SEC24 homolog D, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-070117-2501]
26. ftr82 ENSDARG00000055647 3302 1.673 - 0.938 - - - - 0.735 - - finTRIM family, member 82 [Source:ZFIN;Acc:ZDB-GENE-030219-207]
27. agr2 ENSDARG00000070480 5143 1.659 - 0.917 - - - - 0.742 - - anterior gradient 2 [Source:ZFIN;Acc:ZDB-GENE-050417-214]
28. shc1 ENSDARG00000075437 3278 1.641 0.790 - - - - - 0.851 - - SHC (Src homology 2 domain containing) transforming protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2538]
29. ormdl1 ENSDARG00000014333 1589 1.639 - - - 0.851 - - 0.788 - - ORMDL sphingolipid biosynthesis regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030616-529]
30. mtdha ENSDARG00000014159, ENSDARG00000115030 9903 1.637 - 0.897 - - - - 0.740 - - metadherin a [Source:ZFIN;Acc:ZDB-GENE-030616-615]
31. abat ENSDARG00000006031 2143 1.632 - - - 0.778 - - 0.854 - - 4-aminobutyrate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-031006-4]
32. tcn2l tcn2l 2428 1.632 0.797 - - - - - 0.835 - -
33. vps9d1 ENSDARG00000019195 582 1.625 - - - - - 0.853 0.772 - - VPS9 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050306-57]
34. vps25 ENSDARG00000059079 3747 1.623 - 0.850 - - - - 0.773 - - vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]
35. CD99L2 ENSDARG00000056722 5588 1.611 - 0.806 - - - - 0.805 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
36. wasf2 ENSDARG00000024209 5338 1.61 - - - - - 0.713 0.897 - - WAS protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-865]
37. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.605 - - - 0.778 - - 0.827 - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
38. gng5 ENSDARG00000039830 12102 1.603 - 0.885 - - - - 0.718 - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
39. ankrd54 ENSDARG00000055743 1575 1.599 - - 0.826 - - - 0.773 - - ankyrin repeat domain 54 [Source:ZFIN;Acc:ZDB-GENE-040718-318]
40. arhgef2 ENSDARG00000075819 2173 1.598 - - - - - - 0.895 0.703 - rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
41. eppk1 ENSDARG00000096359 4315 1.59 0.831 - - - - - 0.759 - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
42. hexb ENSDARG00000034368 3505 1.586 0.725 - - - - - 0.861 - - hexosaminidase B (beta polypeptide) [Source:ZFIN;Acc:ZDB-GENE-030131-2333]
43. sult2st1_1 ENSDARG00000033170 3074 1.586 0.733 - - - - - 0.853 - - sulfotransferase family 2, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030219-114]
44. tax1bp3 ENSDARG00000059177 4324 1.583 - - - - - 0.782 0.801 - - Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2830]
45. rab5c ENSDARG00000026712 4733 1.575 0.806 - - - - - 0.769 - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
46. dpp7 ENSDARG00000027750, ENSDARG00000112154, ENSDARG00000115933 2341 1.575 - 0.855 - - - - 0.720 - - dipeptidyl-peptidase 7 [Source:ZFIN;Acc:ZDB-GENE-050306-16]
47. ca15a ENSDARG00000015654 2657 1.571 - 0.834 - - - - 0.737 - - carbonic anhydrase XVa [Source:ZFIN;Acc:ZDB-GENE-070424-7]
48. ggnbp2 ENSDARG00000055086 1419 1.553 - - - 0.738 - - 0.815 - - gametogenetin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-060929-52]
49. C3H16orf13 C3H16orf13 652 1.55 - - - 0.786 - 0.764 - - -
50. s100u ENSDARG00000071014 4754 1.55 - - - - - 0.707 0.843 - - S100 calcium binding protein U [Source:ZFIN;Acc:ZDB-GENE-030131-3121]
51. si:ch211-232i5.3 ENSDARG00000086874 1256 1.545 0.780 - - - - - 0.765 - - si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
52. cst3 ENSDARG00000007795 13753 1.543 0.707 - - - - - 0.836 - - cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
53. msxc msxc 3142 1.539 - - - - - 0.746 0.793 - -
54. cnn2 ENSDARG00000035858 18201 1.539 - 0.705 - - - - 0.834 - - calponin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-542]
55. msxb msxb 2650 1.532 - - - - - 0.824 0.708 - -
56. rrm2b ENSDARG00000033367, ENSDARG00000115899 2754 1.527 - 0.738 - - - - 0.789 - - ribonucleotide reductase M2 b [Source:ZFIN;Acc:ZDB-GENE-030616-614]
57. sfxn1 ENSDARG00000019963 1689 1.517 0.726 - - - - - 0.791 - - sideroflexin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-45]
58. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 1.507 - - - 0.773 - - - 0.734 - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
59. gmppb ENSDARG00000017658 3484 1.503 0.785 - - - - - 0.718 - - GDP-mannose pyrophosphorylase B [Source:ZFIN;Acc:ZDB-GENE-040801-234]
60. SLC25A24 ENSDARG00000008568 2005 1.502 - - - - - 0.730 0.772 - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 [Source:ZFIN;Acc:ZDB-GENE-040912-183]
61. ube2h ENSDARG00000000019 9900 1.495 - 0.747 - - - - 0.748 - - ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-67]
62. sec23b ENSDARG00000019360 6210 1.485 - 0.715 - - - - 0.770 - - Sec23 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-5479]
63. aanat2 ENSDARG00000079802 175 1.481 - - 0.751 0.730 - - - - - arylalkylamine N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-991019-6]
64. zgc:55512 zgc:55512 4436 1.48 0.770 - - - - - 0.710 - -
65. eps8l1 1598 1.474 0.720 - - - - 0.754 - - - eps8-like1, transcript variant X3
66. cwc25 ENSDARG00000003382 2134 1.47 - - - 0.740 - - 0.730 - - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
67. CABZ01057488.1 ENSDARG00000110427 598 1.467 0.722 - - - - - 0.745 - -
68. OMG OMG 1202 1.463 0.705 - - - - - 0.758 - -
69. mllt4 mllt4 2939 1.454 - - - - - 0.729 0.725 - -
70. impad1 ENSDARG00000058114 667 1.447 0.743 - - - - - 0.704 - - inositol monophosphatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-051127-23]
71. CU570791.5 CU570791.5 872 1.443 - - - 0.726 - - 0.717 - -
72. fbl ENSDARG00000053912 5891 1.437 - - - - - - - 0.720 0.717 fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
73. slc37a4a ENSDARG00000038106 1375 1.435 - - - 0.708 - - 0.727 - - solute carrier family 37 (glucose-6-phosphate transporter), member 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2230]
74. gnpda1 ENSDARG00000037307, ENSDARG00000109317, ENSDARG00000114846 2191 1.425 0.709 - - - - - 0.716 - - glucosamine-6-phosphate deaminase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-417]
75. cldni ENSDARG00000054616, ENSDARG00000111133 16328 1.411 - - - - - 0.703 0.708 - - claudin i [Source:ZFIN;Acc:ZDB-GENE-010328-9]
76. kng1 ENSDARG00000022372, ENSDARG00000112486 2503 1.404 0.704 - - - - - 0.700 - - kininogen 1 [Source:ZFIN;Acc:ZDB-GENE-041010-56]
77. CNOT2 ENSDARG00000061802 1500 0.997 - 0.997 - - - - - - - CCR4-NOT transcription complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070410-70]
78. CU655970.1 CU655970.1 2123 0.995 - 0.995 - - - - - - -
79. fmr1 ENSDARG00000037433 5132 0.995 - 0.995 - - - - - - - fragile X mental retardation 1 [Source:ZFIN;Acc:ZDB-GENE-020731-6]
80. zgc:101858 ENSDARG00000035129 1393 0.995 - 0.995 - - - - - - - zgc:101858 [Source:ZFIN;Acc:ZDB-GENE-040927-13]
81. kctd15a ENSDARG00000045893 1272 0.995 - 0.995 - - - - - - - potassium channel tetramerization domain containing 15a [Source:ZFIN;Acc:ZDB-GENE-041010-105]
82. pdap1b ENSDARG00000002967 2159 0.994 - 0.994 - - - - - - - pdgfa associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-942]
83. akirin2 ENSDARG00000058729 13245 0.994 - 0.994 - - - - - - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
84. tbc1d23 ENSDARG00000044357, ENSDARG00000109696 6272 0.994 - 0.994 - - - - - - - TBC1 domain family, member 23 [Source:ZFIN;Acc:ZDB-GENE-040426-1253]
85. ptp4a2 ptp4a2 3196 0.992 - 0.992 - - - - - - -
86. zgc:113208 ENSDARG00000035610, ENSDARG00000109302 1095 0.992 - 0.992 - - - - - - - zgc:113208 [Source:ZFIN;Acc:ZDB-GENE-050417-450]
87. CR293507.1 ENSDARG00000112572 3198 0.992 - 0.992 - - - - - - -
88. snx16 ENSDARG00000046072 931 0.992 - 0.992 - - - - - - - sorting nexin 16 [Source:ZFIN;Acc:ZDB-GENE-040426-1832]
89. eps15l1a ENSDARG00000042670 1565 0.992 - 0.992 - - - - - - - epidermal growth factor receptor pathway substrate 15-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-274]
90. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 0.992 - 0.992 - - - - - - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
91. SLC6A16_1 SLC6A16_1 1130 0.992 - 0.992 - - - - - - -
92. C19H1orf85 C19H1orf85 1587 0.991 - 0.991 - - - - - - -
93. wu:fb12e11 wu:fb12e11 2332 0.991 - 0.991 - - - - - - -
94. si:ch211-129c21.1 ENSDARG00000024775 371 0.991 - 0.991 - - - - - - - si:ch211-129c21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5796]
95. kif3a ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 1216 0.991 - 0.991 - - - - - - - kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]
96. C13H10orf54 C13H10orf54 450 0.991 - 0.991 - - - - - - -
97. SMARCA1 ENSDARG00000012776 673 0.991 - 0.991 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296]
98. CABZ01057907.1 CABZ01057907.1 1140 0.991 - 0.991 - - - - - - -
99. arih1 ENSDARG00000003616, ENSDARG00000109413 1739 0.991 - 0.991 - - - - - - - ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5213]
100. marveld2a ENSDARG00000025076 917 0.991 - 0.991 - - - - - - - MARVEL domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050411-59]

There are 1270 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA