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Results for nfia

Gene Name Gene ID Reads Annotation
nfia ENSDARG00000062420 573 nuclear factor I/A [Source:ZFIN;Acc:ZDB-GENE-050208-501]










Genes with expression patterns similar to nfia

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nfia ENSDARG00000062420 573 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nuclear factor I/A [Source:ZFIN;Acc:ZDB-GENE-050208-501]
2. SPTBN4_1 ENSDARG00000092624 473 2.29 - - - - - 0.777 - 0.788 0.725 spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
3. nr2e1 ENSDARG00000017107 340 1.761 - - - - - - - 0.890 0.871 nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
4. gsx1 ENSDARG00000035735 1243 1.735 - - - - - - - 0.909 0.826 GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
5. vezf1a ENSDARG00000008247 1449 1.674 - - - - - - - 0.841 0.833 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
6. tbr1b ENSDARG00000004712 248 1.66 - - 0.786 - - - - - 0.874 T-box, brain, 1b [Source:ZFIN;Acc:ZDB-GENE-000323-1]
7. lhx2b ENSDARG00000031222 517 1.656 - - 0.804 - - - - 0.852 - LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-051220-1]
8. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 1.65 - - - - - - - 0.759 0.891 SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
9. stap2a ENSDARG00000092810 591 1.644 - - - - - - - 0.831 0.813 signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
10. eomesa ENSDARG00000006640 257 1.626 - - 0.822 - - - - - 0.804 eomesodermin homolog a [Source:ZFIN;Acc:ZDB-GENE-001228-1]
11. si:dkey-235h8.1 si:dkey-235h8.1 2457 1.624 - - 0.807 - - - - 0.817 -
12. tfap2e ENSDARG00000008861 497 1.608 - - - - - - - 0.898 0.710 transcription factor AP-2 epsilon [Source:ZFIN;Acc:ZDB-GENE-040426-1455]
13. igdcc3 ENSDARG00000075158 1921 1.599 - - - 0.796 - 0.803 - - - immunoglobulin superfamily, DCC subclass, member 3 [Source:ZFIN;Acc:ZDB-GENE-080303-24]
14. barhl1a ENSDARG00000035508, ENSDARG00000110061, ENSDARG00000112355 374 1.598 - - - - - - - 0.707 0.891 BarH-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050417-212]
15. MPPED1 ENSDARG00000088181 117 1.579 - - - 0.740 - - - - 0.839 metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
16. syt1a ENSDARG00000030614 542 1.574 - - - - - 0.715 - 0.859 - synaptotagmin Ia [Source:ZFIN;Acc:ZDB-GENE-040718-165]
17. her2 ENSDARG00000038205 3219 1.574 - - - - - - - 0.839 0.735 hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
18. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.574 - - - - - - - 0.830 0.744 SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
19. celf3a ENSDARG00000034668 2432 1.566 - - - - - - - 0.761 0.805 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
20. bcl11ba ENSDARG00000062510 169 1.566 - - 0.762 - - - - - 0.804 B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
21. celsr1b ENSDARG00000058259 1219 1.562 - - - 0.723 - - - - 0.839 cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
22. fezf2 ENSDARG00000070677 224 1.559 - - 0.747 - - - - - 0.812 FEZ family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-001103-3]
23. tcf7l2 ENSDARG00000004415, ENSDARG00000110486 1920 1.557 - - - - - - - 0.721 0.836 transcription factor 7 like 2 [Source:ZFIN;Acc:ZDB-GENE-991110-8]
24. gpr37l1a ENSDARG00000006079 422 1.553 - - - - - - - 0.703 0.850 G protein-coupled receptor 37 like 1a [Source:ZFIN;Acc:ZDB-GENE-110411-20]
25. insm1b ENSDARG00000053301 2032 1.547 - - - - - 0.745 - - 0.802 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
26. dpysl5a ENSDARG00000011141 1827 1.546 - - - - - - - 0.804 0.742 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
27. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.546 - - - - - - - 0.724 0.822 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
28. otx1b 96 1.543 - - - - - - - 0.723 0.820 orthodenticle homeobox 1b
29. smarca5 ENSDARG00000052348 15433 1.536 - - - - - 0.761 - - 0.775 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
30. dlb ENSDARG00000004232 5120 1.514 - - - - - - - 0.778 0.736 deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
31. hs3st1l2 ENSDARG00000035578 279 1.513 - - - - - - - 0.761 0.752 heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-070202-3]
32. ing4 ENSDARG00000030716 5908 1.501 - - - - - 0.704 - 0.797 - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
33. ubap2 ubap2 4167 1.5 - - - - - - - 0.750 0.750
34. pou3f3a ENSDARG00000042032 2835 1.498 - - - - - 0.730 - - 0.768 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
35. her4.3 ENSDARG00000070770 613 1.498 - - - 0.770 - 0.728 - - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
36. tbr1a ENSDARG00000076259 341 1.496 - - 0.739 - - - - - 0.757 T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
37. otx1a 1607 1.493 - - - - - - - 0.718 0.775 orthodenticle homeobox 1a
38. rbb4 rbb4 15541 1.493 - - - - - - - 0.771 0.722
39. TMEM57 TMEM57 260 1.482 - - 0.766 - - - - - 0.716
40. whsc1 1701 1.475 - - - 0.755 - - - 0.720 - Wolf-Hirschhorn syndrome candidate 1
41. pcdh19 ENSDARG00000034344 2378 1.474 - - - - - 0.703 - - 0.771 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
42. ptpdc1 ptpdc1 281 1.469 - - - 0.705 - 0.764 - - -
43. gtf3c6 ENSDARG00000043301 97 1.469 - - - 0.710 - - 0.759 - - general transcription factor IIIC, polypeptide 6, alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1009]
44. TMTC2 TMTC2 478 1.467 - - - - - 0.756 0.711 - -
45. zbtb20 ENSDARG00000005586 195 1.467 - - 0.703 - - 0.764 - - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
46. kif5c ENSDARG00000076027 424 1.464 - - - - - 0.712 - 0.752 - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
47. nono ENSDARG00000020482, ENSDARG00000115783 12482 1.462 - - - - - - - 0.712 0.750 non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
48. tmem35 ENSDARG00000052567 5685 1.461 - - - - - - - 0.758 0.703 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
49. ascl1a ENSDARG00000038386 1290 1.449 - - - - - - - 0.722 0.727 achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
50. safb ENSDARG00000020467 5608 1.447 - - - - - - - 0.732 0.715 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
51. arnt2 ENSDARG00000103697 5731 1.427 - - - - - 0.724 - 0.703 - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
52. E2F2 E2F2 871 1.418 - - - - - 0.703 - 0.715 -
53. si:ch1073-160m15.1 si:ch1073-160m15.1 74 0.925 - - - - - 0.925 - - -
54. lhx9 ENSDARG00000056979 249 0.902 - - - - - - - - 0.902 LIM homeobox 9 [Source:ZFIN;Acc:ZDB-GENE-050417-210]
55. dbx1a ENSDARG00000086393 3161 0.898 - - - - - - - 0.898 - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
56. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 0.896 - - - - - 0.896 - - - netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
57. wdr76 ENSDARG00000053554, ENSDARG00000115151 813 0.888 - - - - - 0.888 - - - WD repeat domain 76 [Source:ZFIN;Acc:ZDB-GENE-030131-4513]
58. BAD BAD 1322 0.886 - - - - - - 0.886 - -
59. r3hdm1 ENSDARG00000101458 5241 0.878 - - - - - - - - 0.878 R3H domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7119]
60. tfap2d ENSDARG00000023272 308 0.875 - - - - - - - - 0.875 transcription factor AP-2 delta (activating enhancer binding protein 2 delta) [Source:ZFIN;Acc:ZDB-GENE-050913-99]
61. sox9b ENSDARG00000043923 5375 0.871 - - - - - 0.871 - - - SRY (sex determining region Y)-box 9b [Source:ZFIN;Acc:ZDB-GENE-001103-2]
62. TAPT1 TAPT1 1165 0.867 - - - - - 0.867 - - -
63. scg2a 800 0.865 - - - - - 0.865 - - - secretogranin II (chromogranin C) a
64. amer2 ENSDARG00000075222 594 0.862 - - - - - - - 0.862 - APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
65. otx2 766 0.862 - - - - - - - - 0.862 orthodenticle homeobox 2, transcript variant X2
66. hhipl1 ENSDARG00000062501 210 0.859 0.859 - - - - - - - - HHIP-like 1 [Source:ZFIN;Acc:ZDB-GENE-090306-3]
67. C1H4orf27 C1H4orf27 1961 0.855 - - - - - - - 0.855 -
68. fam26e fam26e 211 0.854 0.854 - - - - - - - -
69. pbx3a ENSDARG00000089262 97 0.851 - - - - - 0.851 - - - pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
70. jmjd4 ENSDARG00000058995 199 0.85 - - - - - 0.850 - - - jumonji domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-636]
71. calca ENSDARG00000056590 150 0.846 - - - - - 0.846 - - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
72. helt ENSDARG00000056400 482 0.845 - - - - - - - - 0.845 helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
73. DMBX1 DMBX1 140 0.841 - - - - - - - - 0.841
74. CABZ01028287.1 CABZ01028287.1 626 0.838 - - - - - - - - 0.838
75. tox ENSDARG00000032317 9126 0.837 - - - - - - - - 0.837 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
76. sox1b ENSDARG00000008131 379 0.836 - - - - - 0.836 - - - SRY (sex determining region Y)-box 1b [Source:ZFIN;Acc:ZDB-GENE-060322-5]
77. atrnl1b ENSDARG00000006420 641 0.833 - - - - - 0.833 - - - attractin-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8092]
78. fzd9b ENSDARG00000014673, ENSDARG00000116739 155 0.833 - - - - - 0.833 - - - frizzled class receptor 9b [Source:ZFIN;Acc:ZDB-GENE-000906-4]
79. prmt1 ENSDARG00000010246 11311 0.831 - - - - - - - 0.831 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
80. fyna ENSDARG00000011370 1679 0.831 - - - - - - - 0.831 - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
81. zgc:109949 ENSDARG00000103413 426 0.829 - - - 0.829 - - - - - zgc:109949 [Source:ZFIN;Acc:ZDB-GENE-050522-166]
82. syt11b ENSDARG00000056105 578 0.827 - - - - - 0.827 - - - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
83. acp5b ENSDARG00000101456, ENSDARG00000109721, ENSDARG00000110522 48 0.826 0.826 - - - - - - - - acid phosphatase 5b, tartrate resistant [Source:ZFIN;Acc:ZDB-GENE-040718-151]
84. irx1a ENSDARG00000101831 644 0.826 - - - - - - - - 0.826 iroquois homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040707-1]
85. si:ch73-265d7.2 ENSDARG00000116713 2142 0.825 - - - - - 0.825 - - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
86. CABZ01086220.1 CABZ01086220.1 723 0.825 - - - - - 0.825 - - -
87. sae1 ENSDARG00000010487 2028 0.824 - - - - - - - 0.824 - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
88. si:ch211-10a23.2 ENSDARG00000060656 471 0.823 - - - - - - - - 0.823 si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
89. cspg5a ENSDARG00000069981 1699 0.823 - - - - - - - 0.823 - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
90. CU914629.1 CU914629.1 345 0.822 - 0.822 - - - - - - -
91. six3a ENSDARG00000058008, ENSDARG00000114971 586 0.822 - - - - - - - 0.822 - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
92. and2 ENSDARG00000079302 20939 0.822 0.822 - - - - - - - - actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
93. CABZ01071911.2 CABZ01071911.2 64 0.821 - - - - - 0.821 - - -
94. foxp2 ENSDARG00000005453 1504 0.819 - - 0.819 - - - - - - forkhead box P2 [Source:ZFIN;Acc:ZDB-GENE-041203-2]
95. abca1a ENSDARG00000074635 1085 0.818 - - - - - 0.818 - - - ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
96. tmed4 ENSDARG00000024954 3476 0.817 - - - - - - - 0.817 - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
97. chd5 ENSDARG00000105083 132 0.817 - - - - - - - - 0.817 chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
98. CT955967.1 ENSDARG00000099956 2885 0.817 - - - - - - - 0.817 -
99. elavl3 ENSDARG00000014420 8644 0.816 - - - - - 0.816 - - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
100. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 0.816 - - - - - - - 0.816 - zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]

There are 611 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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