Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nefmb

Gene Name Gene ID Reads Annotation
nefmb ENSDARG00000043697 2052 neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]










Genes with expression patterns similar to nefmb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nefmb ENSDARG00000043697 2052 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
2. spock3 ENSDARG00000070266, ENSDARG00000110158 934 3.099 0.825 0.748 - - - 0.749 0.777 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
3. dbx2 2971 2.774 0.923 - - - - 0.978 0.873 - - developing brain homeobox 2
4. SPOCK1 ENSDARG00000074644 794 2.74 0.931 - - - - 0.974 0.835 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
5. sypb ENSDARG00000002230 262 2.712 0.926 - - - - 0.920 0.866 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
6. stx1b ENSDARG00000000503 2724 2.704 0.931 - - - - 0.901 0.872 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
7. gng3 ENSDARG00000009553 2530 2.702 0.905 - - - - 0.947 0.850 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
8. cdk5r1b ENSDARG00000045087 2075 2.693 0.860 - - - - 0.962 0.871 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
9. elavl4 ENSDARG00000045639 998 2.691 0.874 - - - - 0.961 0.856 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
10. scn8aa ENSDARG00000005775 792 2.685 0.954 - - - - 0.910 0.821 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
11. INA INA 950 2.683 0.882 - - - - 0.933 0.868 - -
12. scn2b ENSDARG00000101713 796 2.681 0.917 - - - - 0.928 0.836 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
13. TUBB8P7_1 TUBB8P7_1 2722 2.68 0.986 - - - - 0.858 0.836 - -
14. pax6a ENSDARG00000103379 3061 2.674 0.845 - - - - 0.956 0.873 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
15. dpysl3 ENSDARG00000002587 4381 2.672 0.878 - - - - 0.949 0.845 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
16. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.669 0.901 - - - - 0.912 0.856 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
17. TUBB8P7_2 TUBB8P7_2 565 2.668 0.886 - - - - 0.923 0.859 - -
18. dnajc5aa ENSDARG00000042948 2885 2.667 0.889 - - - - 0.980 0.798 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
19. jag1a ENSDARG00000030289 1275 2.666 0.910 - - - - 0.874 0.882 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
20. slc8a2b ENSDARG00000100592 598 2.659 0.836 - - - - 0.967 0.856 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
21. APBB3 ENSDARG00000053771 654 2.656 0.937 - - - - 0.878 0.841 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
22. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.647 0.899 - - - - 0.891 0.857 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
23. kcnd1 ENSDARG00000074746 153 2.637 0.905 - - - - 0.943 0.789 - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
24. nadl1.1 1200 2.635 0.913 - - - - 0.898 0.824 - - neural adhesion molecule L1.1, transcript variant X1
25. bhlhe22 ENSDARG00000058039 1673 2.631 0.906 - - - - 0.881 0.844 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
26. rbfox3 rbfox3 1443 2.623 0.823 - - - - 0.945 0.855 - -
27. evx2 ENSDARG00000059255 317 2.619 0.874 - - - - 0.928 0.817 - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
28. EPB41L1 EPB41L1 1896 2.619 0.771 - - - - 0.973 0.875 - -
29. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.614 0.950 - - - - 0.790 0.874 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
30. tuba1c ENSDARG00000055216 8384 2.61 0.883 - - - - 0.875 0.852 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
31. slc1a2b ENSDARG00000102453 3136 2.609 0.891 - - - - 0.868 0.850 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
32. clstn3 ENSDARG00000073883 590 2.608 0.789 - - - - 0.956 0.863 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
33. her2 ENSDARG00000038205 3219 2.604 0.888 - - - - 0.890 0.826 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
34. sox19b ENSDARG00000040266 532 2.602 0.893 - - - - 0.908 0.801 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
35. snap25a ENSDARG00000020609 4537 2.602 0.901 - - - - 0.852 0.849 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
36. BSN BSN 463 2.594 0.892 - - - - 0.950 0.752 - -
37. rusc1 ENSDARG00000078125 617 2.592 0.904 - - - - 0.924 0.764 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
38. gsx1 ENSDARG00000035735 1243 2.591 0.778 - - - - 0.956 0.857 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
39. neurog1 ENSDARG00000056130 3924 2.591 0.824 - - - - 0.938 0.829 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
40. CABZ01111990.1 CABZ01111990.1 4374 2.59 0.818 - - - - 0.932 0.840 - -
41. ntrk2a ENSDARG00000059897 185 2.587 0.861 - - - - 0.861 0.865 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
42. cspg5a ENSDARG00000069981 1699 2.587 0.792 - - - - 0.967 0.828 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
43. ckbb ENSDARG00000043257 3503 2.586 0.835 - - - - 0.941 0.810 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
44. epha4b ENSDARG00000011600 3110 2.586 0.861 - - - - 0.911 0.814 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
45. MAP1A MAP1A 847 2.583 0.930 - - - - 0.812 0.841 - -
46. gabrg2 ENSDARG00000053665 434 2.581 0.829 - - - - 0.904 0.848 - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
47. pou4f1 ENSDARG00000005559 821 2.581 0.890 - - - - 0.831 0.860 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
48. sncgb ENSDARG00000109715 1014 2.576 0.920 - - - - 0.788 0.868 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
49. rab3ab ENSDARG00000043835 1267 2.574 0.882 - - - - 0.831 0.861 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
50. celf4 ENSDARG00000070045 1537 2.571 0.881 - - - - 0.882 0.808 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
51. stmn2b ENSDARG00000070537 1586 2.568 0.944 - - - - 0.866 0.758 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
52. mllt11 ENSDARG00000071026 2518 2.565 0.941 - - - - 0.837 0.787 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
53. atp6v0cb ENSDARG00000036577 3472 2.564 0.887 - - - - 0.860 0.817 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
54. syngr3a ENSDARG00000014871 405 2.561 0.857 - - - - 0.956 0.748 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
55. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.561 0.910 - - - - 0.819 0.832 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
56. gap43 ENSDARG00000099744 4114 2.553 0.902 - - - - 0.826 0.825 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
57. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.55 0.833 - - - - 0.858 0.859 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
58. nbeaa ENSDARG00000070080 862 2.55 0.861 - - - - 0.852 0.837 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
59. SKOR2 SKOR2 1041 2.55 0.891 - - - - 0.791 0.868 - -
60. GJD2_1 GJD2_1 3045 2.548 0.868 - - - - 0.891 0.789 - -
61. AGO1 ENSDARG00000092644 4521 2.544 0.807 - - - - 0.935 0.802 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
62. olfm1b ENSDARG00000014053 1392 2.544 0.898 - - - - 0.792 0.854 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
63. syt4 ENSDARG00000036505 421 2.543 0.891 - - - - 0.842 0.810 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
64. EFCC1 ENSDARG00000077826 1359 2.543 0.847 - - - - 0.837 0.859 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
65. kcnc3a ENSDARG00000055855 1821 2.539 0.767 - - - - 0.898 0.874 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
66. lhx1a ENSDARG00000014018 958 2.537 0.788 - - - - 0.904 0.845 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
67. CAMSAP3 ENSDARG00000059475 263 2.537 0.942 - - - - 0.862 0.733 - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
68. cadm3 ENSDARG00000057013 1545 2.536 0.842 - - - - 0.845 0.849 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
69. tmie ENSDARG00000069423 305 2.534 0.810 - - - - 0.915 0.809 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
70. nova2 ENSDARG00000017673 7685 2.533 0.801 - - - - 0.936 0.796 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
71. map7d2a ENSDARG00000068480 513 2.532 0.883 - - - - 0.878 0.771 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
72. ppp2r2c ppp2r2c 441 2.53 0.842 - - - - 0.884 0.804 - -
73. tmem59l ENSDARG00000003655 1536 2.529 0.849 - - - - 0.912 0.768 - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
74. gfap ENSDARG00000025301 5584 2.528 0.827 - - - - 0.840 0.861 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
75. sh3gl2 sh3gl2 1305 2.526 0.830 - - - - 0.819 0.877 - -
76. zgc:194665 ENSDARG00000004577 136 2.525 0.857 - - - - 0.954 0.714 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
77. GADD45G GADD45G 382 2.522 0.851 - - - - 0.870 0.801 - -
78. STMN3 ENSDARG00000038465 1009 2.519 0.812 - - - - 0.837 0.870 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
79. si:ch211-152f6.6 si:ch211-152f6.6 278 2.516 0.932 - - - - 0.832 0.752 - -
80. CR407704.1 CR407704.1 188 2.515 0.868 - - - - 0.825 0.822 - -
81. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.512 0.759 - - - - 0.909 0.844 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
82. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.511 0.900 - - - - 0.772 0.839 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
83. PRRT2 ENSDARG00000103588 913 2.508 0.810 - - - - 0.951 0.747 - - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
84. stmn1b ENSDARG00000033655 9491 2.506 0.890 0.779 - - - - 0.837 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
85. necab2 ENSDARG00000056745, ENSDARG00000110976 304 2.506 0.748 - - - - 0.963 0.795 - - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
86. elavl3 ENSDARG00000014420 8644 2.502 - 0.705 - - - 0.950 0.847 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
87. ZFHX3 ENSDARG00000103057 7759 2.498 0.806 - - - - 0.827 0.865 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
88. fgf13b ENSDARG00000056633 455 2.497 0.781 - - - - 0.950 0.766 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
89. prrt1 ENSDARG00000062208 368 2.49 0.947 - - - - 0.759 0.784 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
90. snap25b ENSDARG00000058117 469 2.49 0.895 - - - - 0.796 0.799 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
91. znf804a ENSDARG00000027079 121 2.485 0.836 - - - - 0.944 0.705 - - zinc finger protein 804A [Source:ZFIN;Acc:ZDB-GENE-070912-632]
92. scrt2 ENSDARG00000056175 4331 2.482 0.828 - - - - 0.807 0.847 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
93. slc18a3a ENSDARG00000006356 1285 2.476 0.735 - - - - 0.902 0.839 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
94. amph ENSDARG00000007663 599 2.476 0.879 - - - - 0.743 0.854 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
95. MAPK8IP1_1 MAPK8IP1_1 186 2.47 0.893 - - - - 0.734 0.843 - -
96. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 2.47 0.799 - - - - 0.960 0.711 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]
97. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.468 0.712 - - - - 0.879 0.877 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
98. vgf ENSDARG00000105529 247 2.465 0.793 - - - - 0.899 0.773 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
99. ndrg4 ENSDARG00000103937 1234 2.465 0.803 - - - - 0.795 0.867 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
100. her8.2 ENSDARG00000069675 315 2.463 0.836 - - - - 0.905 0.722 - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]

There are 1855 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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