Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for neflb

Gene Name Gene ID Reads Annotation
neflb ENSDARG00000012426 298 neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]










Genes with expression patterns similar to neflb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. neflb ENSDARG00000012426 298 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
2. fam219ab ENSDARG00000013813 591 2.786 - 1.000 - - - 0.874 0.912 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
3. rap2ip rap2ip 681 2.776 - 0.907 - - - 0.898 0.971 - -
4. syt11a ENSDARG00000057913 1145 2.755 - 0.902 - - - 0.883 0.970 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
5. GJD2_1 GJD2_1 3045 2.746 - 1.000 - - - 0.860 0.886 - -
6. slc17a6b ENSDARG00000041150 823 2.731 - 1.000 - - - 0.832 0.899 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
7. sez6l2 ENSDARG00000076052 360 2.727 - 0.907 - - - 0.843 0.977 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
8. stx1b ENSDARG00000000503 2724 2.715 - 0.814 - - - 0.928 0.973 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
9. cacng3b ENSDARG00000076401 91 2.708 - 1.000 - - - 0.781 0.927 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
10. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 2.705 - 1.000 - - - 0.747 0.958 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
11. gng3 ENSDARG00000009553 2530 2.705 - 0.929 - - - 0.793 0.983 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
12. rbfox3 rbfox3 1443 2.688 - 0.833 - - - 0.912 0.943 - -
13. scn2b ENSDARG00000101713 796 2.686 - 0.909 - - - 0.785 0.992 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
14. TUBB2A TUBB2A 142 2.681 - 1.000 - - - 0.817 0.864 - -
15. slc1a2b ENSDARG00000102453 3136 2.677 - 0.829 - - - 0.917 0.931 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
16. snap25a ENSDARG00000020609 4537 2.676 - 0.811 - - - 0.905 0.960 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
17. scrt2 ENSDARG00000056175 4331 2.674 - 0.895 - - - 0.888 0.891 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
18. dbx2 2971 2.667 - 0.781 - - - 0.900 0.986 - - developing brain homeobox 2
19. nes ENSDARG00000088805 2710 2.665 - 0.770 - - - 0.927 0.968 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
20. SV2B SV2B 208 2.657 - 0.909 - - - 0.800 0.948 - -
21. amph ENSDARG00000007663 599 2.651 - 0.909 - - - 0.811 0.931 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
22. MAP6 MAP6 643 2.64 - 0.927 - - - 0.723 0.990 - -
23. lhx1a ENSDARG00000014018 958 2.636 - 0.903 - - - 0.812 0.921 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
24. MAP1A MAP1A 847 2.632 - 0.811 - - - 0.909 0.912 - -
25. scn8aa ENSDARG00000005775 792 2.613 - 0.754 - - - 0.965 0.894 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
26. nova2 ENSDARG00000017673 7685 2.602 - 0.708 - - - 0.934 0.960 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
27. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 2.6 - 0.815 - - - 0.890 0.895 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
28. CABZ01066439.2 CABZ01066439.2 5 2.59 0.860 1.000 - - - - 0.730 - -
29. calb1 ENSDARG00000031598 252 2.585 - 1.000 - - - 0.744 0.841 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
30. RNF208 ENSDARG00000078056 60 2.576 0.842 - - - - 0.806 0.928 - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
31. pcsk1nl ENSDARG00000076170 1232 2.568 - 0.745 - - - 0.827 0.996 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
32. lingo1a ENSDARG00000034165 179 2.547 - 1.000 - - - 0.715 0.832 - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
33. nptx1l ENSDARG00000074671 569 2.547 - 0.918 - - - 0.704 0.925 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
34. SNAP91 ENSDARG00000098809 556 2.545 0.707 - - - - 0.848 0.990 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
35. st18 663 2.545 0.755 - - - - 0.837 0.953 - - suppression of tumorigenicity 18, zinc finger
36. tmem179 ENSDARG00000013292 343 2.537 - 0.946 - - - 0.818 0.773 - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
37. MCTP1 MCTP1 219 2.535 - 0.881 - - - 0.886 0.768 - -
38. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.532 - 0.788 - - - 0.868 0.876 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
39. CHRNB4 ENSDARG00000101677 128 2.511 - 0.946 - - - 0.749 0.816 - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
40. syngr3a ENSDARG00000014871 405 2.51 - 0.806 - - - 0.819 0.885 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
41. zgc:194665 ENSDARG00000004577 136 2.509 - - 0.757 - - 0.849 0.903 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
42. stmn2a ENSDARG00000033234 2272 2.506 - 0.702 - - - 0.863 0.941 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
43. rtn1b ENSDARG00000021143 1682 2.505 - 0.783 - - - 0.873 0.849 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
44. ADAMTS3 ENSDARG00000060127 2839 2.499 0.834 - - - - 0.743 0.922 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
45. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.49 - 0.763 - - - 0.813 0.914 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
46. CHL1 CHL1 1553 2.489 - 0.723 - - - 0.902 0.864 - -
47. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.463 - 0.777 - - - 0.762 0.924 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
48. pdzrn4 ENSDARG00000045687 362 2.459 0.783 - - - - 0.716 0.960 - - PDZ domain containing ring finger 4 [Source:ZFIN;Acc:ZDB-GENE-041210-237]
49. rufy3 ENSDARG00000029692 3031 2.444 - 0.746 - - - 0.823 0.875 - - RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
50. gad2 ENSDARG00000015537 724 2.43 - 0.830 - - - 0.766 0.834 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
51. jag1a ENSDARG00000030289 1275 2.418 - 0.736 - - - 0.815 0.867 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
52. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 2.406 - 0.759 - - - 0.838 0.809 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
53. TUSC5 TUSC5 1436 2.406 - 0.701 - - - 0.798 0.907 - -
54. csf1b ENSDARG00000068263 248 2.378 - 0.714 - - - 0.754 0.910 - - colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
55. st3gal2 ENSDARG00000112898 370 2.359 - 0.742 - - - 0.863 0.754 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050419-181]
56. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 2.325 - 0.704 - - - 0.754 0.867 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
57. stxbp5a ENSDARG00000002656 318 2.314 - 0.733 - - - 0.748 0.833 - - syntaxin binding protein 5a (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-041001-161]
58. urp2 ENSDARG00000067781 85 2.169 0.712 0.752 0.705 - - - - - - urotensin II-related peptide [Source:ZFIN;Acc:ZDB-GENE-110718-3]
59. si:ch211-138k19.2 si:ch211-138k19.2 398 1.995 - 1.000 - - - - 0.995 - -
60. FP074874.2 ENSDARG00000105724 107 1.941 0.941 1.000 - - - - - - -
61. trim46b ENSDARG00000058649 54 1.94 - 1.000 - - - - 0.940 - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
62. jph3 ENSDARG00000102204 175 1.936 - 1.000 - - - - 0.936 - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
63. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.935 - - - - - 0.963 0.972 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
64. tuba1c ENSDARG00000055216 8384 1.933 - - - - - 0.954 0.979 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
65. nadl1.1 1200 1.931 - - - - - 0.936 0.995 - - neural adhesion molecule L1.1, transcript variant X1
66. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1.931 - 1.000 - - - - 0.931 - -
67. FUT9 FUT9 91 1.928 - 1.000 - - - - 0.928 - -
68. slc18a3a ENSDARG00000006356 1285 1.923 - - - - - 0.940 0.983 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
69. dpysl3 ENSDARG00000002587 4381 1.919 - - - - - 0.956 0.963 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
70. sall3b ENSDARG00000057586 982 1.917 - - - - - 0.921 0.996 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
71. vsnl1b ENSDARG00000044053 1120 1.915 - - - - - 0.940 0.975 - - visinin-like 1b [Source:ZFIN;Acc:ZDB-GENE-080225-39]
72. gfap ENSDARG00000025301 5584 1.914 - - - - - 0.928 0.986 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
73. vgf ENSDARG00000105529 247 1.912 - - - - - 0.954 0.958 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
74. atp6v0cb ENSDARG00000036577 3472 1.911 - - - - - 0.941 0.970 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
75. NTRK3 NTRK3 163 1.905 - 1.000 - - - - 0.905 - -
76. cdk5r1b ENSDARG00000045087 2075 1.904 - - - - - 0.964 0.940 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
77. TUBB8P7_1 TUBB8P7_1 2722 1.902 - - - - - 0.908 0.994 - -
78. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 1.9 - - - - - 0.956 0.944 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
79. AKT3 AKT3 1729 1.898 - - - - - 0.925 0.973 - -
80. nrarpb ENSDARG00000018958 6225 1.895 - - - - - 0.924 0.971 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
81. SPOCK1 ENSDARG00000074644 794 1.895 - - - - - 0.921 0.974 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
82. nova1 ENSDARG00000020178 4129 1.894 - - - - - 0.957 0.937 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
83. pcdh1gc5 ENSDARG00000104826 10052 1.894 - - - - - 0.915 0.979 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
84. pcp4b 1080 1.893 - - - - - 0.903 0.990 - - Purkinje cell protein 4b
85. pax6a ENSDARG00000103379 3061 1.89 - - - - - 0.954 0.936 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
86. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.889 0.916 - - - - - 0.973 - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
87. gap43 ENSDARG00000099744 4114 1.887 - - - - - 0.953 0.934 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
88. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.887 - - - - - 0.905 0.982 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
89. CABZ01021538.1 CABZ01021538.1 67 1.886 0.958 - - - - - 0.928 - -
90. gsx1 ENSDARG00000035735 1243 1.885 - - - - - 0.919 0.966 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
91. TUBA1A ENSDARG00000001889 25294 1.884 - - - - - 0.915 0.969 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
92. rab3ab ENSDARG00000043835 1267 1.884 - - - - - 0.895 0.989 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
93. epha4b ENSDARG00000011600 3110 1.884 - - - - - 0.931 0.953 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
94. grin1a ENSDARG00000027828 1327 1.883 - - - - - 0.944 0.939 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
95. nell2b ENSDARG00000062797 854 1.881 - - - - - 0.919 0.962 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
96. INA INA 950 1.881 - - - - - 0.969 0.912 - -
97. kcnc3a ENSDARG00000055855 1821 1.877 - - - - - 0.910 0.967 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
98. msi1 ENSDARG00000010710 2634 1.871 - - - - - 0.926 0.945 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
99. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1.871 - 1.000 - - - 0.871 - - - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
100. neurog1 ENSDARG00000056130 3924 1.871 - - - - - 0.890 0.981 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]

There are 2024 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA