Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nedd1

Gene Name Gene ID Reads Annotation
nedd1 ENSDARG00000013472 209 neural precursor cell expressed, developmentally down-regulated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2906]










Genes with expression patterns similar to nedd1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nedd1 ENSDARG00000013472 209 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 neural precursor cell expressed, developmentally down-regulated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2906]
2. MAD2L2_1 MAD2L2_1 705 1.733 0.853 - - - - 0.880 - - -
3. CABZ01021433.1 ENSDARG00000105696 74 1.695 - 0.865 - - 0.830 - - - - si:cabz01021433.2 [Source:NCBI gene;Acc:100333857]
4. ARHGAP6 33 1.674 - 0.834 - - 0.840 - - - - Rho GTPase activating protein 6
5. acy3.1 ENSDARG00000093003 54 1.674 - 0.868 - - - 0.806 - - - aspartoacylase (aminocyclase) 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040718-345]
6. slc17a9b ENSDARG00000011049 231 1.667 - 0.907 - - - - 0.760 - - solute carrier family 17 (vesicular nucleotide transporter), member 9b [Source:ZFIN;Acc:ZDB-GENE-040718-380]
7. tango6 ENSDARG00000034001 203 1.65 - - - - - 0.893 0.757 - - transport and golgi organization 6 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050419-237]
8. plcd1a ENSDARG00000059123 46 1.648 - - - - - 0.883 0.765 - - phospholipase C, delta 1a [Source:ZFIN;Acc:ZDB-GENE-071004-78]
9. gabbr2 ENSDARG00000061042 122 1.632 - 0.788 - - - 0.844 - - - gamma-aminobutyric acid (GABA) B receptor, 2 [Source:ZFIN;Acc:ZDB-GENE-060503-620]
10. mbip ENSDARG00000019364 238 1.627 - 0.732 - - - 0.895 - - - MAP3K12 binding inhibitory protein 1 [Source:ZFIN;Acc:ZDB-GENE-060810-43]
11. hoxa13b ENSDARG00000036254 404 1.617 - 0.834 - - - 0.783 - - - homeobox A13b [Source:ZFIN;Acc:ZDB-GENE-980526-365]
12. gng13b ENSDARG00000037921 215 1.604 - 0.901 - - 0.703 - - - - guanine nucleotide binding protein (G protein), gamma 13b [Source:ZFIN;Acc:ZDB-GENE-040718-97]
13. C8H9orf3 C8H9orf3 414 1.601 - 0.760 - - - - 0.841 - -
14. si:ch211-207d6.2 ENSDARG00000031658 93 1.59 - 0.743 - - - 0.847 - - - si:ch211-207d6.2 [Source:ZFIN;Acc:ZDB-GENE-070912-185]
15. PLLP ENSDARG00000062756, ENSDARG00000109949 114 1.589 - 0.704 - - - 0.885 - - - plasmolipin [Source:ZFIN;Acc:ZDB-GENE-050419-195]
16. luzp2 ENSDARG00000068247 80 1.588 - 0.811 - - 0.777 - - - - leucine zipper protein 2 [Source:ZFIN;Acc:ZDB-GENE-060503-278]
17. IRS2 IRS2 485 1.571 0.757 - - - - 0.814 - - -
18. cep135 ENSDARG00000002991 164 1.559 - 0.853 - - 0.706 - - - - centrosomal protein 135 [Source:ZFIN;Acc:ZDB-GENE-041210-325]
19. CIT CIT 212 1.549 0.770 0.779 - - - - - - -
20. fadd ENSDARG00000103021 142 1.542 - - - - - 0.818 0.724 - - Fas (tnfrsf6)-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-070606-3]
21. tacc1 ENSDARG00000073753 1127 1.541 - 0.742 - - - 0.799 - - - transforming, acidic coiled-coil containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-090521-5]
22. ift172 ENSDARG00000041870 1239 1.535 0.741 0.794 - - - - - - - intraflagellar transport 172 [Source:ZFIN;Acc:ZDB-GENE-040827-1]
23. BX664752.1 BX664752.1 64 1.523 0.765 - - - 0.758 - - - -
24. neurl4 ENSDARG00000078127, ENSDARG00000116566 334 1.505 - 0.797 - - 0.708 - - - - neuralized E3 ubiquitin protein ligase 4 [Source:ZFIN;Acc:ZDB-GENE-100318-4]
25. PHKA2 ENSDARG00000030687 280 1.495 - - - - 0.774 0.721 - - - phosphorylase kinase, alpha 2 (liver) [Source:ZFIN;Acc:ZDB-GENE-130422-1]
26. nans nans 1365 1.495 - - - - - - 0.782 - 0.713
27. MAL_1 MAL_1 200 1.484 0.711 0.773 - - - - - - -
28. shda ENSDARG00000094243 929 1.46 - - - - - - 0.741 - 0.719 Src homology 2 domain containing transforming protein D, a [Source:ZFIN;Acc:ZDB-GENE-070912-58]
29. med28 ENSDARG00000037410, ENSDARG00000112591, ENSDARG00000113633, ENSDARG00000117136 629 1.458 - 0.701 - - - - 0.757 - - mediator complex subunit 28 [Source:ZFIN;Acc:ZDB-GENE-041121-4]
30. acvrl1 ENSDARG00000018179 308 1.451 0.717 0.734 - - - - - - - activin A receptor like type 1 [Source:ZFIN;Acc:ZDB-GENE-021003-1]
31. ubxn8 ENSDARG00000098902, ENSDARG00000113836 152 1.447 - - - - - 0.711 0.736 - - UBX domain protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-266]
32. zgc:112083 ENSDARG00000037405 306 0.97 - 0.970 - - - - - - - zgc:112083 [Source:ZFIN;Acc:ZDB-GENE-050417-284]
33. CT573152.3 CT573152.3 206 0.941 - 0.941 - - - - - - -
34. cldnd ENSDARG00000006580 17 0.94 - - - - - 0.940 - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
35. ap5m1 ENSDARG00000031533 153 0.933 - - - - - 0.933 - - - adaptor related protein complex 5 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-050522-231]
36. hinfp ENSDARG00000004851 273 0.93 - 0.930 - - - - - - - histone H4 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-2764]
37. bicc1b ENSDARG00000070497 406 0.929 - - - - - - 0.929 - - BicC family RNA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-080522-3]
38. ube2t ENSDARG00000063285 716 0.928 - 0.928 - - - - - - - ubiquitin-conjugating enzyme E2T (putative) [Source:ZFIN;Acc:ZDB-GENE-061013-547]
39. ing5a ENSDARG00000022413 268 0.922 - - - - - 0.922 - - - inhibitor of growth family, member 5a [Source:ZFIN;Acc:ZDB-GENE-031016-1]
40. RHOBTB1 ENSDARG00000079468 189 0.916 - 0.916 - - - - - - - Rho related BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-871]
41. cyp2k8 ENSDARG00000101190 69 0.915 - - - - - 0.915 - - - cytochrome P450, family 2, subfamily K, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-080721-19]
42. nenf ENSDARG00000040192 599 0.911 - - - - - 0.911 - - - neudesin neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-050320-129]
43. CAPN1_1 ENSDARG00000055338 288 0.911 - - - - - 0.911 - - - calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]
44. SV2A ENSDARG00000059945 1278 0.909 - 0.909 - - - - - - - synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
45. fbxl18 ENSDARG00000007443, ENSDARG00000113264 178 0.908 - - - - - 0.908 - - - F-box and leucine-rich repeat protein 18 [Source:ZFIN;Acc:ZDB-GENE-050913-65]
46. CABZ01044023.1 ENSDARG00000117734 240 0.908 - - - - - 0.908 - - -
47. mir130b 180 0.907 - 0.907 - - - - - - - microRNA 130b
48. si:ch211-260b17.6 32 0.906 - - - - - 0.906 - - - si:ch211-260b17.6
49. zgc:174700_1 zgc:174700_1 60 0.904 - - - - - 0.904 - - -
50. abcg1 ENSDARG00000063475 97 0.903 - 0.903 - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
51. PRR5 PRR5 630 0.903 - 0.903 - - - - - - -
52. FILIP1 339 0.898 - - - - - 0.898 - - - filamin A interacting protein 1
53. ATL2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1987 0.897 - 0.897 - - - - - - - atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
54. ntpcr ENSDARG00000021853 104 0.897 - 0.897 - - - - - - - nucleoside-triphosphatase, cancer-related [Source:ZFIN;Acc:ZDB-GENE-040801-200]
55. KLF8 ENSDARG00000060661 219 0.897 - - - - - 0.897 - - - Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
56. rag2 ENSDARG00000052121 15 0.897 - - - - - 0.897 - - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
57. si:dkeyp-104f11.9 ENSDARG00000096715 81 0.897 - - - - - 0.897 - - - si:dkeyp-104f11.9 [Source:ZFIN;Acc:ZDB-GENE-130603-41]
58. qpctla ENSDARG00000061691 869 0.896 - - - - - 0.896 - - - glutaminyl-peptide cyclotransferase-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1441]
59. efna3b ENSDARG00000098295 319 0.896 - 0.896 - - - - - - - ephrin-A3b [Source:ZFIN;Acc:ZDB-GENE-011108-1]
60. clvs2 ENSDARG00000053122 1390 0.895 - 0.895 - - - - - - - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
61. KCNG2 ENSDARG00000035961 58 0.893 - - - - - 0.893 - - - potassium voltage-gated channel, subfamily G, member 2 [Source:ZFIN;Acc:ZDB-GENE-100701-1]
62. sec22bb_1 ENSDARG00000100435 57 0.893 - - - - - 0.893 - - - SEC22 homolog B, vesicle trafficking protein b [Source:ZFIN;Acc:ZDB-GENE-030131-5488]
63. GPC5 GPC5 11 0.892 - - - - - 0.892 - - -
64. fam151b ENSDARG00000020024 255 0.892 - 0.892 - - - - - - - family with sequence similarity 151, member B [Source:ZFIN;Acc:ZDB-GENE-040801-38]
65. uox ENSDARG00000007024 205 0.892 - 0.892 - - - - - - - urate oxidase [Source:ZFIN;Acc:ZDB-GENE-030826-24]
66. osbpl2b ENSDARG00000013830, ENSDARG00000114103 393 0.892 - - - - - 0.892 - - - oxysterol binding protein-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6138]
67. itga4 ENSDARG00000103056 223 0.891 - - - - - 0.891 - - - integrin alpha 4 [Source:ZFIN;Acc:ZDB-GENE-110411-108]
68. dctn1a ENSDARG00000019743 45 0.891 - 0.891 - - - - - - - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
69. SLC2A11 SLC2A11 5 0.89 - - - - - 0.890 - - -
70. RPUSD2 ENSDARG00000060992 107 0.888 - - - - - 0.888 - - - RNA pseudouridylate synthase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120411-43]
71. parp6a ENSDARG00000042703 112 0.886 - 0.886 - - - - - - - poly (ADP-ribose) polymerase family, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-272]
72. ascc2 ENSDARG00000013058 228 0.886 - - - - - 0.886 - - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
73. furinb ENSDARG00000070971 213 0.885 - - - - - - 0.885 - - furin (paired basic amino acid cleaving enzyme) b [Source:ZFIN;Acc:ZDB-GENE-040901-2]
74. rfc5 ENSDARG00000035634 974 0.884 - - - - - 0.884 - - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
75. si:dkey-241l7.2 ENSDARG00000105335 6 0.884 - - - - - 0.884 - - - si:dkey-241l7.2 [Source:ZFIN;Acc:ZDB-GENE-041014-240]
76. fermt3a fermt3a 56 0.884 - - - - - 0.884 - - -
77. mcat ENSDARG00000016613, ENSDARG00000096473 140 0.884 - - - - - 0.884 - - - malonyl CoA:ACP acyltransferase (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-041111-231]
78. CU695006.1 CU695006.1 4 0.883 - - - - - 0.883 - - -
79. fah ENSDARG00000101762 274 0.883 - - - - - 0.883 - - - fumarylacetoacetate hydrolase (fumarylacetoacetase) [Source:ZFIN;Acc:ZDB-GENE-030131-1091]
80. si:ch73-290k24.5 ENSDARG00000076310 39 0.883 - - - - - 0.883 - - - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
81. si:ch211-213a13.11 si:ch211-213a13.11 9 0.883 - - - - - 0.883 - - -
82. ENSDARG00000078787 ENSDARG00000078787 97 0.883 - - - - - 0.883 - - -
83. angptl6 ENSDARG00000020265 273 0.883 - - - - - 0.883 - - - angiopoietin-like 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9735]
84. dlx1a ENSDARG00000013125 142 0.882 - - - - - 0.882 - - - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
85. atp6ap1a ENSDARG00000041417 898 0.882 - 0.882 - - - - - - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
86. dcp1a ENSDARG00000100136 714 0.882 - 0.882 - - - - - - - decapping mRNA 1A [Source:ZFIN;Acc:ZDB-GENE-030723-5]
87. C7H4orf48 C7H4orf48 1455 0.882 - 0.882 - - - - - - -
88. zfand2a ENSDARG00000103511 829 0.882 0.882 - - - - - - - - zinc finger, AN1-type domain 2A [Source:ZFIN;Acc:ZDB-GENE-040426-1596]
89. igfbp3 ENSDARG00000099144 269 0.882 - 0.882 - - - - - - - insulin-like growth factor binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040412-1]
90. PHLDB2_1 PHLDB2_1 316 0.881 - 0.881 - - - - - - -
91. ugt2b3 46 0.881 - - - - - 0.881 - - - UDP glucuronosyltransferase 2 family, polypeptide B3
92. baxa_1 ENSDARG00000020623, ENSDARG00000089129 9 0.88 - - - - - 0.880 - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
93. fut10 ENSDARG00000100322 22 0.88 - - - - - 0.880 - - - fucosyltransferase 10 [Source:ZFIN;Acc:ZDB-GENE-081022-183]
94. CABZ01080492.1 CABZ01080492.1 495 0.88 - - - - - 0.880 - - -
95. RP1L1 RP1L1 15 0.88 - - - - - 0.880 - - -
96. BX649490.1 ENSDARG00000091718 7 0.88 - - - - - 0.880 - - - titin-like [Source:NCBI gene;Acc:101883412]
97. zgc:103519 zgc:103519 3 0.88 - - - - - 0.880 - - -
98. otogl ENSDARG00000088750 2 0.88 - - - - - 0.880 - - - otogelin-like [Source:ZFIN;Acc:ZDB-GENE-050419-93]
99. arl3l2 ENSDARG00000015404 39 0.88 - 0.880 - - - - - - - ADP-ribosylation factor-like 3, like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1678]
100. zgc:171779 ENSDARG00000016908 26 0.88 - - - - - 0.880 - - - zgc:171779 [Source:ZFIN;Acc:ZDB-GENE-071004-38]

There are 1090 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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