Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ndufv3_1

Gene Name Gene ID Reads Annotation
ndufv3_1 ENSDARG00000090389 25 NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]










Genes with expression patterns similar to ndufv3_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ndufv3_1 ENSDARG00000090389 25 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
2. col28a1 col28a1 5 2.46 0.859 - - - - - 0.820 - 0.781
3. si:dkey-177p2.15p si:dkey-177p2.15p 20 1.758 0.859 0.899 - - - - - - -
4. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 1.679 0.859 - - - - - 0.820 - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
5. vmhcl 119 1.679 0.859 - - - - - 0.820 - - ventricular myosin heavy chain-like
6. kcnj1a.1 ENSDARG00000091232 110 1.646 - 0.763 - 0.883 - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031118-55]
7. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 1.642 0.859 - - - - 0.783 - - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
8. il15 ENSDARG00000052361 219 1.638 0.912 - - - - - 0.726 - - interleukin 15 [Source:ZFIN;Acc:ZDB-GENE-060213-2]
9. nr2c2 ENSDARG00000042477 356 1.638 - 0.810 - - - - 0.828 - - nuclear receptor subfamily 2, group C, member 2 [Source:ZFIN;Acc:ZDB-GENE-080403-8]
10. APH1A APH1A 129 1.617 - 0.877 - - - 0.740 - - -
11. HTR1E 103 1.592 0.859 - - - - 0.733 - - - 5-hydroxytryptamine receptor 1E
12. si:dkey-24p1.6 ENSDARG00000028784, ENSDARG00000097212 23 1.592 - 0.877 0.715 - - - - - - si:dkey-24p1.6 [Source:ZFIN;Acc:ZDB-GENE-060503-67]
13. oprd1b ENSDARG00000037159 21 1.59 - 0.723 - - 0.867 - - - - opioid receptor, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8473]
14. AL935186.2 ENSDARG00000097345 6 1.582 0.859 0.723 - - - - - - -
15. cyp4f3 ENSDARG00000053530 10 1.582 0.859 0.723 - - - - - - - cytochrome P450, family 4, subfamily F, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070410-108]
16. BX119963.1 ENSDARG00000096135 28 1.578 0.859 - - - - - 0.719 - -
17. zgc:154055 ENSDARG00000103924 452 1.567 0.859 - - - - 0.708 - - - zgc:154055 [Source:ZFIN;Acc:ZDB-GENE-060929-612]
18. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 1.561 0.859 - - 0.702 - - - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
19. pxmp2 ENSDARG00000003144 50 1.543 - 0.723 - - - - 0.820 - - peroxisomal membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-184]
20. runx2b ENSDARG00000059233 106 1.54 - - - - - 0.720 0.820 - - runt-related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-040629-4]
21. si:ch73-346o4.3 si:ch73-346o4.3 29 1.526 - - - - 0.720 - - - 0.806
22. si:dkey-270e21.7 si:dkey-270e21.7 155 1.525 - 0.816 - - - - 0.709 - -
23. SLC47A1_2 SLC47A1_2 50 1.51 - 0.723 - - - 0.787 - - -
24. kcnj11 ENSDARG00000051880, ENSDARG00000114565 211 1.5 0.792 - - - - 0.708 - - - potassium inwardly-rectifying channel, subfamily J, member 11 [Source:ZFIN;Acc:ZDB-GENE-060308-2]
25. slc17a9a ENSDARG00000042954 36 1.494 - 0.723 - - - 0.771 - - - solute carrier family 17 (vesicular nucleotide transporter), member 9a [Source:ZFIN;Acc:ZDB-GENE-081021-1]
26. si:ch211-113a14.19 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 22 1.475 - 0.700 - - - 0.775 - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
27. stc1l ENSDARG00000058476 512 1.453 - - - 0.717 0.736 - - - - stanniocalcin 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-1521]
28. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 1.442 - 0.723 - - - - 0.719 - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
29. six1a ENSDARG00000039304 1183 1.423 0.715 - - - - 0.708 - - - SIX homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040718-155]
30. exosc4 ENSDARG00000103432 21 1 - - - - 1.000 - - - - exosome component 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1702]
31. fgf3 ENSDARG00000101540 75 1 - - - - - - 1.000 - - fibroblast growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-178]
32. nt5e ENSDARG00000071017 18 1 1.000 - - - - - - - - 5'-nucleotidase, ecto (CD73) [Source:ZFIN;Acc:ZDB-GENE-040426-1261]
33. sigirr ENSDARG00000062204 52 1 - 1.000 - - - - - - - single immunoglobulin and toll-interleukin 1 receptor (TIR) domain [Source:ZFIN;Acc:ZDB-GENE-080303-3]
34. ptprz1b ENSDARG00000020871 435 1 - - - - - - 1.000 - - protein tyrosine phosphatase, receptor-type, Z polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-050506-100]
35. si:dkey-31e10.6 si:dkey-31e10.6 113 1 - 1.000 - - - - - - -
36. DOCK1_1 DOCK1_1 2 0.971 - - - - 0.971 - - - -
37. p2rx1 ENSDARG00000016695, ENSDARG00000110431 9 0.971 - - - - 0.971 - - - - purinergic receptor P2X, ligand-gated ion channel, 1 [Source:ZFIN;Acc:ZDB-GENE-030319-1]
38. BX465203.1 ENSDARG00000113985 8 0.971 - - - - 0.971 - - - -
39. CR388163.1 ENSDARG00000096928 5 0.971 - - - - 0.971 - - - -
40. zgc:112966 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 7 0.971 - - - - 0.971 - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
41. slco1f3 ENSDARG00000105691 6 0.971 - - - - 0.971 - - - - solute carrier organic anion transporter family, member 1F3 [Source:ZFIN;Acc:ZDB-GENE-080212-5]
42. pdlim3a ENSDARG00000011023, ENSDARG00000115861 3 0.971 - - - - 0.971 - - - - PDZ and LIM domain 3a [Source:ZFIN;Acc:ZDB-GENE-050505-1]
43. si:ch211-113a14.26 5 0.971 - - - - 0.971 - - - - si:ch211-113a14.26
44. si:dkey-54j5.1 si:dkey-54j5.1 4 0.971 - - - - 0.971 - - - -
45. tmem8c 10 0.971 - - - - 0.971 - - - - transmembrane protein 8C, transcript variant X1
46. CU464087.1 ENSDARG00000105588 2 0.971 - - - - 0.971 - - - -
47. si:dkey-43f9.1 si:dkey-43f9.1 7 0.968 - - - - 0.968 - - - -
48. CABZ01054396.1 CABZ01054396.1 139 0.963 - - - - - 0.963 - - -
49. hsp70l_1 ENSDARG00000055723 72 0.96 - - - - 0.960 - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
50. col8a2 ENSDARG00000060893 504 0.958 0.958 - - - - - - - - collagen, type VIII, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060503-488]
51. BX004890.2 BX004890.2 84 0.958 - - - - - - 0.958 - -
52. gfi1aa ENSDARG00000020746 30 0.951 - - - - 0.951 - - - - growth factor independent 1A transcription repressor a [Source:ZFIN;Acc:ZDB-GENE-050522-534]
53. CABZ01073954.1 CABZ01073954.1 258 0.951 0.951 - - - - - - - -
54. clic5b ENSDARG00000070584 4 0.947 - - - - - - - - 0.947 chloride intracellular channel 5b [Source:ZFIN;Acc:ZDB-GENE-040426-2542]
55. si:ch211-176g6.1 ENSDARG00000096522 8 0.947 - - - - - - - - 0.947 si:ch211-176g6.1 [Source:ZFIN;Acc:ZDB-GENE-121214-106]
56. si:ch211-53m15.1 si:ch211-53m15.1 28 0.947 - - - - - - - - 0.947
57. CABZ01069020.1 ENSDARG00000105806 19 0.947 - - - - - - - - 0.947 si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
58. slc5a1 ENSDARG00000013871 4 0.947 - - - - - - - - 0.947 solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1524]
59. ABCA7 ABCA7 12 0.947 - - - - - - - - 0.947
60. cd79b ENSDARG00000104691 5 0.947 - - - - - - - - 0.947 CD79b molecule, immunoglobulin-associated beta [Source:ZFIN;Acc:ZDB-GENE-121219-1]
61. si:ch211-215m21.27 si:ch211-215m21.27 3 0.947 - - - - - - - - 0.947
62. si:dkey-151m22.8 ENSDARG00000095934 41 0.947 - - - - - - - - 0.947 si:dkey-151m22.8 [Source:ZFIN;Acc:ZDB-GENE-110411-250]
63. CH25H ENSDARG00000045190 6 0.947 - - - - - - - - 0.947 cholesterol 25-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-041212-81]
64. hlcs ENSDARG00000039934 2 0.947 - - - - - - - - 0.947 holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) [Source:ZFIN;Acc:ZDB-GENE-030131-5333]
65. si:ch211-196c10.6 si:ch211-196c10.6 3 0.947 - - - - - - - - 0.947
66. si:dkey-63d15.12 ENSDARG00000075480 9 0.947 - - - - - - - - 0.947 si:dkey-63d15.12 [Source:ZFIN;Acc:ZDB-GENE-080303-18]
67. zgc:171951 zgc:171951 2 0.947 - - - - - - - - 0.947
68. U1_14 U1_14 1 0.947 - - - - - - - - 0.947
69. XCR1 XCR1 9 0.947 - - - - - - - - 0.947
70. si:dkey-246g23.2 ENSDARG00000062964 5 0.947 - - - - - - - - 0.947 si:dkey-246g23.2 [Source:ZFIN;Acc:ZDB-GENE-050419-100]
71. havcr2 ENSDARG00000091692 1 0.947 - - - - - - - - 0.947 hepatitis A virus cellular receptor 2 [Source:ZFIN;Acc:ZDB-GENE-091204-20]
72. LAMB3 LAMB3 31 0.947 - - - - - - - - 0.947
73. ROCK2_3 ROCK2_3 12 0.947 - - - - - - - - 0.947
74. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 0.941 0.941 - - - - - - - - carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
75. crebl2 ENSDARG00000104049 16 0.941 0.941 - - - - - - - - cAMP responsive element binding protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-456]
76. chmp6b ENSDARG00000102024 37 0.941 - 0.941 - - - - - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
77. COLGALT2 ENSDARG00000014670 63 0.941 0.941 - - - - - - - - collagen beta(1-O)galactosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070222-1]
78. tekt3 ENSDARG00000045038 9 0.941 - 0.941 - - - - - - - tektin 3 [Source:ZFIN;Acc:ZDB-GENE-080130-2]
79. si:dkey-146l4.1 si:dkey-146l4.1 113 0.941 0.941 - - - - - - - -
80. cabp2a ENSDARG00000052016 19 0.941 0.941 - - - - - - - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]
81. zgc:174224 ENSDARG00000093875 4 0.941 0.941 - - - - - - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
82. klf9 ENSDARG00000068194 5 0.941 - 0.941 - - - - - - - Kruppel-like factor 9 [Source:ZFIN;Acc:ZDB-GENE-060526-244]
83. dhcr24 ENSDARG00000013236 61 0.941 0.941 - - - - - - - - 24-dehydrocholesterol reductase [Source:ZFIN;Acc:ZDB-GENE-041212-73]
84. mfsd2aa ENSDARG00000030630 66 0.941 - 0.941 - - - - - - - major facilitator superfamily domain containing 2aa [Source:ZFIN;Acc:ZDB-GENE-041114-166]
85. tnmd ENSDARG00000052615 42 0.941 0.941 - - - - - - - - tenomodulin [Source:ZFIN;Acc:ZDB-GENE-080220-31]
86. fgd1 ENSDARG00000100402 18 0.941 0.941 - - - - - - - - FYVE, RhoGEF and PH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-33]
87. zgc:110224 ENSDARG00000032263 147 0.941 - 0.941 - - - - - - - zgc:110224 [Source:ZFIN;Acc:ZDB-GENE-050417-120]
88. NAV1 NAV1 23 0.938 - 0.938 - - - - - - -
89. rnf150a_1 ENSDARG00000024827 12 0.936 - - - - 0.936 - - - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
90. zgc:173570 ENSDARG00000037645, ENSDARG00000114242 46 0.932 - - - - 0.932 - - - - zgc:173570 [Source:ZFIN;Acc:ZDB-GENE-080218-15]
91. CABZ01006980.1 CABZ01006980.1 5 0.93 - - - - - - 0.930 - -
92. BX004873.2 BX004873.2 19 0.93 - - - - - - 0.930 - -
93. zgc:77938 ENSDARG00000088366 74 0.93 - - 0.930 - - - - - - zgc:77938 [Source:ZFIN;Acc:ZDB-GENE-040426-1910]
94. si:ch211-214p13.9 ENSDARG00000091411 2 0.93 - - - - - - 0.930 - - si:ch211-214p13.9 [Source:ZFIN;Acc:ZDB-GENE-060503-213]
95. si:dkey-205h13.2 ENSDARG00000089429 71 0.93 - - - - - - 0.930 - - si:dkey-205h13.2 [Source:ZFIN;Acc:ZDB-GENE-080225-18]
96. alkbh1 ENSDARG00000071164 140 0.929 - 0.929 - - - - - - - alkB homolog 1, histone H2A dioxygenase [Source:ZFIN;Acc:ZDB-GENE-050522-196]
97. crfb4 ENSDARG00000068711 51 0.926 - - - - - - - - 0.926 cytokine receptor family member b4 [Source:ZFIN;Acc:ZDB-GENE-070905-3]
98. rbp1b rbp1b 36 0.926 - - - - 0.926 - - - -
99. grip2b ENSDARG00000027618 9 0.926 - - - - - - - - 0.926 glutamate receptor interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-070705-172]
100. rad54b ENSDARG00000092134 231 0.922 - 0.922 - - - - - - - RAD54 homolog B [Source:ZFIN;Acc:ZDB-GENE-060810-50]

There are 764 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA