Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ndufb3

Gene Name Gene ID Reads Annotation
ndufb3 ENSDARG00000075709 6609 NADH:ubiquinone oxidoreductase subunit B3 [Source:ZFIN;Acc:ZDB-GENE-091204-407]










Genes with expression patterns similar to ndufb3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ndufb3 ENSDARG00000075709 6609 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NADH:ubiquinone oxidoreductase subunit B3 [Source:ZFIN;Acc:ZDB-GENE-091204-407]
2. zgc:193541 ENSDARG00000092873 21276 2.57 - 0.932 - - - 0.714 0.924 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
3. myom1a ENSDARG00000061249 10230 2.504 - 0.921 - - - 0.744 0.839 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
4. tmem182 tmem182 12589 2.467 - 0.875 - - - 0.764 0.828 - -
5. atp5o 10343 2.436 - - - 0.716 - 0.844 0.876 - - ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
6. rsu1 ENSDARG00000102885 3604 2.391 - 0.929 - - - 0.750 0.712 - - Ras suppressor protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-518]
7. agla ENSDARG00000103811 2856 2.376 - - - - - 0.787 0.792 - 0.797 amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a [Source:ZFIN;Acc:ZDB-GENE-071004-6]
8. mrps18a ENSDARG00000024465 5187 2.362 - 0.917 - - - 0.740 0.705 - - mitochondrial ribosomal protein S18A [Source:ZFIN;Acc:ZDB-GENE-041210-109]
9. DNAJA4 ENSDARG00000051762 5657 2.357 - - 0.746 - - 0.783 0.828 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
10. cyc1 ENSDARG00000038075 16699 2.314 - 0.747 - - - 0.754 0.813 - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
11. EHBP1L1 EHBP1L1 2500 2.3 - - - - - 0.756 0.821 - 0.723
12. hhatlb ENSDARG00000005139 6674 1.785 - 0.927 - - - 0.858 - - - hedgehog acyltransferase like, b [Source:ZFIN;Acc:ZDB-GENE-050506-130]
13. sar1ab ENSDARG00000033320 3984 1.779 - 0.929 - - - - 0.850 - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
14. atp5e 14858 1.756 - 0.873 - - - - 0.883 - - ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
15. mibp2 ENSDARG00000101844 17444 1.74 - 0.919 - - - 0.821 - - - muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]
16. eif4a1b ENSDARG00000003032, ENSDARG00000116907 14301 1.708 - 0.971 - - - - - - 0.737 eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
17. mdh1b ENSDARG00000018008 3196 1.706 - - - - - 0.854 0.852 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
18. cox7c ENSDARG00000104537 12169 1.705 - - - - - 0.820 0.885 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
19. tufm ENSDARG00000104173 9292 1.705 - 0.910 - - - - 0.795 - - Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
20. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.704 - - - - - 0.849 0.855 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
21. pdcd5 ENSDARG00000026072 3135 1.702 - 0.924 - - - - 0.778 - - programmed cell death 5 [Source:ZFIN;Acc:ZDB-GENE-040426-980]
22. SYNPO2 SYNPO2 7382 1.697 - 0.888 - - - 0.809 - - -
23. hypk ENSDARG00000059725 20584 1.697 - 0.830 - - - - 0.867 - - huntingtin interacting protein K [Source:ZFIN;Acc:ZDB-GENE-080515-6]
24. acap3a ENSDARG00000075990 9652 1.696 - 0.922 - - - - 0.774 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
25. txlnbb ENSDARG00000076241 6396 1.696 - - - - - 0.864 0.832 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
26. eif3ha ENSDARG00000102452 9238 1.695 - 0.916 - - - - 0.779 - - eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
27. rp42-pen rp42-pen 3395 1.694 - - - - - 0.894 0.800 - -
28. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.69 - - - - - 0.862 0.828 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
29. acsl1 acsl1 4216 1.688 - - - - - 0.831 0.857 - -
30. zgc:158296 ENSDARG00000070923 3935 1.684 - - - - - 0.864 0.820 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
31. ntmt1 ENSDARG00000022399 5779 1.677 - - - - - 0.802 0.875 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
32. sh3bgr ENSDARG00000021633 3498 1.675 - - - - - 0.835 0.840 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
33. mrpl14 ENSDARG00000068886 1991 1.674 - 0.925 - - - - 0.749 - - mitochondrial ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-040426-1066]
34. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.671 - - - - - 0.842 0.829 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
35. aimp1 ENSDARG00000060036 5343 1.67 - - - - - 0.816 0.854 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
36. bag2 ENSDARG00000035005 1402 1.669 - - - - - 0.859 0.810 - - BCL2 associated athanogene 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1399]
37. MUSTN1 MUSTN1 1882 1.668 - - - - - 0.871 0.797 - -
38. eif2s2 ENSDARG00000053047 15904 1.668 - - - - - 0.799 0.869 - - eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
39. tnnc1b ENSDARG00000037539 13945 1.666 - - - - - 0.869 0.797 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
40. gyg1a ENSDARG00000011934 2276 1.664 - - - - - 0.825 0.839 - - glycogenin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2910]
41. CU633479.5 ENSDARG00000114818 1815 1.663 - - - - - 0.870 0.793 - -
42. capzb ENSDARG00000100252 10444 1.663 - - - - - 0.769 0.894 - - capping actin protein of muscle Z-line subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-7023]
43. txnipb ENSDARG00000070000 2365 1.661 - - - - - 0.898 0.763 - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
44. rbm24a ENSDARG00000102995 5123 1.661 - - - - - 0.818 0.843 - - RNA binding motif protein 24a [Source:ZFIN;Acc:ZDB-GENE-040628-1]
45. slc16a3 ENSDARG00000045051 818 1.656 - - - - - 0.838 0.818 - - solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
46. ilk ENSDARG00000056964 6686 1.655 - - - - - 0.848 0.807 - - integrin-linked kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1435]
47. PTGES3L PTGES3L 4801 1.651 - - - - - 0.809 0.842 - -
48. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 1.648 - - - - - 0.814 0.834 - - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
49. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.645 - - - - - 0.748 0.897 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
50. TRIM63 TRIM63 1600 1.642 - - - - - 0.812 0.830 - -
51. cycsb ENSDARG00000044562 40227 1.641 - - - - - 0.882 0.759 - - cytochrome c, somatic b [Source:ZFIN;Acc:ZDB-GENE-040625-38]
52. rab5if ENSDARG00000074790 8807 1.641 - - - 0.744 - - 0.897 - - RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
53. impdh2 ENSDARG00000006900 3197 1.639 - 0.920 - - - - 0.719 - - IMP (inosine 5'-monophosphate) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030114-5]
54. PTPLA PTPLA 4044 1.638 - - - - - 0.825 0.813 - -
55. nexn ENSDARG00000057317 10972 1.638 - - - - - 0.798 0.840 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
56. tnnt2e ENSDARG00000045822, ENSDARG00000109924 3288 1.635 - - - - - 0.827 0.808 - - troponin T2e, cardiac [Source:ZFIN;Acc:ZDB-GENE-041210-27]
57. naa50 ENSDARG00000027825, ENSDARG00000116858 3221 1.633 - - - - - 0.825 0.808 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-142]
58. CHCHD3 CHCHD3 1425 1.633 - - - - - 0.736 0.897 - -
59. atp5j 4272 1.633 - - - - - 0.745 0.888 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
60. serbp1a_1 ENSDARG00000074242 13588 1.632 - 0.920 - - - - 0.712 - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
61. nid1a ENSDARG00000068710 3948 1.632 - - - - - 0.780 0.852 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
62. znf648 ENSDARG00000104823 1918 1.631 - - - - - 0.854 0.777 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
63. naa15a ENSDARG00000003213 5889 1.63 - - - - - 0.759 0.871 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
64. klhl40a ENSDARG00000039052 2537 1.627 - - - - - 0.778 0.849 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
65. ryr3 ENSDARG00000071331 6795 1.625 - - - - - 0.816 0.809 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
66. ndufs3 ENSDARG00000015385 7790 1.624 - 0.802 - - - 0.822 - - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:ZFIN;Acc:ZDB-GENE-050417-274]
67. fitm1 ENSDARG00000056464 1759 1.623 - - - - - 0.801 0.822 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
68. chrna1 ENSDARG00000009021 2931 1.622 - - - - - 0.788 0.834 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
69. MYOM3 2720 1.622 - - - - - 0.845 0.777 - - myomesin 3, transcript variant X2
70. pim1 ENSDARG00000100020 7035 1.622 - 0.919 - - - - 0.703 - - Pim-1 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-061013-139]
71. jph1a ENSDARG00000058603 2852 1.621 - - - - - 0.811 0.810 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
72. ndufv1 ENSDARG00000036438 8437 1.62 - - - - 0.730 0.890 - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:ZFIN;Acc:ZDB-GENE-040808-73]
73. immt ENSDARG00000102874 3435 1.618 - - - - - 0.773 0.845 - - inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
74. ATP5J_2 ATP5J_2 2381 1.617 - - - - - 0.757 0.860 - -
75. cspg4 ENSDARG00000078227 1084 1.617 - - - - - 0.830 0.787 - - chondroitin sulfate proteoglycan 4 [Source:ZFIN;Acc:ZDB-GENE-050519-1]
76. smyd1a ENSDARG00000009280 1503 1.616 - - - - - 0.797 0.819 - - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
77. rpl12 ENSDARG00000006691, ENSDARG00000114004, ENSDARG00000115546 8591 1.614 - - - - - 0.750 0.864 - - ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-030131-5297]
78. TMEM261 TMEM261 6529 1.612 - - - - - 0.810 0.802 - -
79. aars ENSDARG00000069142, ENSDARG00000113882 10348 1.612 - - - - - 0.752 0.860 - - alanyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-3663]
80. fbp2 ENSDARG00000012366 1042 1.61 - - - - - 0.823 0.787 - - fructose-1,6-bisphosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040822-23]
81. ppp1r3cb ENSDARG00000014554 2507 1.61 - - - - - - 0.840 - 0.770 protein phosphatase 1, regulatory subunit 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1733]
82. asb2a asb2a 845 1.61 - - - - - 0.844 0.766 - -
83. cnbpb ENSDARG00000070922 14606 1.609 - - - - - 0.706 0.903 - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
84. ndufs6 ENSDARG00000056583 7220 1.608 - - - - - 0.814 0.794 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
85. lrrc20 ENSDARG00000105018 1970 1.607 - - 0.770 - - - 0.837 - - leucine rich repeat containing 20 [Source:ZFIN;Acc:ZDB-GENE-041114-49]
86. trdn ENSDARG00000041779 4283 1.606 - - - - - 0.792 0.814 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
87. myoz2a ENSDARG00000012311 1373 1.602 - - - - - 0.807 0.795 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
88. hif1an ENSDARG00000031915 2098 1.602 - - - - - 0.807 0.795 - - hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
89. myoz2b ENSDARG00000037266 2139 1.602 - - - - - 0.840 0.762 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
90. trap1 ENSDARG00000024317, ENSDARG00000114173 2189 1.601 - - - - - 0.820 0.781 - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
91. chchd10 ENSDARG00000010717, ENSDARG00000111874 4782 1.6 - - - - - 0.762 0.838 - - coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1753]
92. rps25 ENSDARG00000041811 52182 1.598 - - - - - 0.852 0.746 - - ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
93. gspt1 ENSDARG00000031048, ENSDARG00000109388 2735 1.595 - - - - - 0.747 0.848 - - G1 to S phase transition 1 [Source:ZFIN;Acc:ZDB-GENE-040822-36]
94. alg3 ENSDARG00000053155 1843 1.594 - - - - - 0.801 0.793 - - asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-050522-334]
95. pdcd4a ENSDARG00000021702 7293 1.594 - - - - - 0.746 0.848 - - programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
96. chrne ENSDARG00000034307, ENSDARG00000112263 1022 1.593 - - - - - 0.779 0.814 - - cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
97. zgc:92518 ENSDARG00000016343 3837 1.591 - - - - - 0.767 0.824 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
98. cct8 ENSDARG00000008243 6843 1.587 - - - - - 0.757 0.830 - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
99. mef2aa ENSDARG00000031756 2699 1.584 - - - - - 0.798 0.786 - - myocyte enhancer factor 2aa [Source:ZFIN;Acc:ZDB-GENE-990415-163]
100. smarcd3a ENSDARG00000038786 2894 1.583 - - - - - 0.830 - - 0.753 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]

There are 953 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA