Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ndrg3b

Gene Name Gene ID Reads Annotation
ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]










Genes with expression patterns similar to ndrg3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
2. sh3bp4a ENSDARG00000020000 1049 2.453 - 0.997 - - - 0.747 0.709 - - SH3-domain binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-040303-3]
3. taf5l ENSDARG00000025808 556 2.331 - - - - - 0.771 0.764 0.796 - TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5987]
4. rbb4 rbb4 15541 1.986 - 0.988 - - 0.998 - - - -
5. NAT16 ENSDARG00000086222 4682 1.811 0.818 0.993 - - - - - - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
6. mrpl54 ENSDARG00000071468 2715 1.771 - 0.992 - - - - 0.779 - - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
7. ccnd1 ENSDARG00000101637 34762 1.735 - 0.792 - - 0.943 - - - - cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
8. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 1.735 - - - - 0.999 - 0.736 - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
9. atp5g3a 9539 1.732 - 0.985 - - - - 0.747 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9), genome duplicate a
10. sh3kbp1 ENSDARG00000075853 2838 1.718 - - - - 1.000 - 0.718 - - SH3-domain kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-186]
11. taf9 ENSDARG00000077870 6992 1.716 - - - - 1.000 - - - 0.716 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]
12. slc38a10 ENSDARG00000077081 1691 1.714 - 0.997 - - - 0.717 - - - solute carrier family 38, member 10 [Source:ZFIN;Acc:ZDB-GENE-050309-21]
13. LIMA1 LIMA1 908 1.704 - 0.996 - - - 0.708 - - -
14. uba52 ENSDARG00000041435 50415 1.703 - - - - 0.958 - 0.745 - - ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7]
15. mrps25 ENSDARG00000041306 3654 1.702 - - - - 1.000 - 0.702 - - mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
16. vps35 ENSDARG00000008224 13245 1.702 - - - - 0.992 - - 0.710 - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
17. ubap1 ENSDARG00000058746 1049 1.699 - 0.986 - - - - - 0.713 - ubiquitin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-950]
18. pmp22b ENSDARG00000060457 20406 1.686 - 0.925 - - - - 0.761 - - peripheral myelin protein 22b [Source:ZFIN;Acc:ZDB-GENE-060421-4337]
19. hars ENSDARG00000003693 7217 1.661 - 0.959 - - - - 0.702 - - histidyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040912-152]
20. gtpbp4 ENSDARG00000018961 5323 1.65 - 0.934 - - - - - 0.716 - GTP binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5982]
21. pqbp1 ENSDARG00000029724 1472 1.647 - - - - - 0.839 0.808 - - polyglutamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-158]
22. utp18 ENSDARG00000102618 1983 1.642 0.743 - - - - 0.899 - - - UTP18 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-060929-668]
23. sub1a ENSDARG00000053446 13383 1.609 - 0.805 - - - 0.804 - - - SUB1 homolog, transcriptional regulator a [Source:ZFIN;Acc:ZDB-GENE-050522-151]
24. mrps16 ENSDARG00000098972, ENSDARG00000115452 2085 1.598 - - - - - 0.795 0.803 - - mitochondrial ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-041010-123]
25. abcf1 ENSDARG00000031795 8635 1.595 - - - - - 0.797 0.798 - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
26. znf207a ENSDARG00000015538 2630 1.592 - - - - - 0.822 - 0.770 - zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
27. klhl21 ENSDARG00000039255 2550 1.581 0.794 - - - - - 0.787 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
28. MMEL1 ENSDARG00000105389 213 1.577 - - - - - 0.849 0.728 - - membrane metallo-endopeptidase-like 1 [Source:ZFIN;Acc:ZDB-GENE-101112-2]
29. gpia ENSDARG00000012987 4624 1.575 0.776 0.799 - - - - - - - glucose-6-phosphate isomerase a [Source:ZFIN;Acc:ZDB-GENE-020513-2]
30. wdr46_1 ENSDARG00000095879 1291 1.573 - - - - - 0.797 0.776 - - WD repeat domain 46 [Source:ZFIN;Acc:ZDB-GENE-040426-1264]
31. gpatch4 ENSDARG00000091931 923 1.57 0.839 - - - - - 0.731 - - G patch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041008-158]
32. vwde ENSDARG00000103443 5758 1.567 0.808 - - - - - 0.759 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
33. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.566 0.723 - - - - - 0.843 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
34. ptp4a1 ENSDARG00000006242 10267 1.555 - - - - - - 0.828 - 0.727 protein tyrosine phosphatase type IVA, member 1 [Source:ZFIN;Acc:ZDB-GENE-041121-11]
35. ercc6 ENSDARG00000075612 1175 1.543 - - - - - - - 0.833 0.710 excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
36. C13H20orf194 C13H20orf194 580 1.533 0.794 - - - - - 0.739 - -
37. ssbp1 ENSDARG00000039350 809 1.527 0.759 - - - - - 0.768 - - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
38. hspa4a ENSDARG00000004754 3439 1.526 0.727 - - - - - 0.799 - - heat shock protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2832]
39. rxfp2b ENSDARG00000019660 464 1.523 - - - - - - 0.742 0.781 - relaxin family peptide receptor 2b [Source:ZFIN;Acc:ZDB-GENE-110408-27]
40. rasl10a ENSDARG00000062314 207 1.522 - - - - - 0.750 - 0.772 - RAS-like, family 10, member A [Source:ZFIN;Acc:ZDB-GENE-060526-273]
41. mrps6 ENSDARG00000039543 1892 1.521 0.721 - - - - - 0.800 - - mitochondrial ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-060825-59]
42. txn2 ENSDARG00000034777 4071 1.519 0.706 - - - - - 0.813 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
43. dnajc8 ENSDARG00000059373 1858 1.498 - - - - - 0.771 - 0.727 - DnaJ (Hsp40) homolog, subfamily C, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-66]
44. mef2d ENSDARG00000040237 6144 1.498 - - - - - - 0.784 0.714 - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
45. ehd1b ENSDARG00000014793, ENSDARG00000110243, ENSDARG00000110919 2496 1.498 0.701 - - - - - 0.797 - - EH-domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2069]
46. opa1_1 ENSDARG00000070801 1424 1.496 - - - - - - 0.743 0.753 - optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]
47. cacng6b ENSDARG00000046079 258 1.495 0.721 - - - - - 0.774 - - calcium channel, voltage-dependent, gamma subunit 6b [Source:ZFIN;Acc:ZDB-GENE-100922-272]
48. BX248510.1 ENSDARG00000075422 1449 1.492 0.734 - - - - - 0.758 - - mitochondrial ribosomal protein L49 [Source:NCBI gene;Acc:558658]
49. fam98a ENSDARG00000078391, ENSDARG00000109752, ENSDARG00000110498 997 1.485 - - - - - - 0.741 0.744 - family with sequence similarity 98, member A [Source:ZFIN;Acc:ZDB-GENE-091202-6]
50. fynrk 527 1.48 - - - - - 0.726 - 0.754 - fyn-related Src family tyrosine kinase
51. gata3 ENSDARG00000016526 1857 1.469 - - - - - 0.759 - 0.710 - GATA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-990415-82]
52. col4a1 ENSDARG00000055009 3083 1.467 0.760 - - - - - 0.707 - - collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
53. slc24a4a ENSDARG00000015425 1464 1.465 0.743 - - - - - - 0.722 - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-050417-291]
54. mrpl37 ENSDARG00000062916 1600 1.463 - - - - - 0.735 0.728 - - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
55. ift46 ENSDARG00000011240 2499 1.462 - - - - - 0.756 - - 0.706 intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
56. cd248b ENSDARG00000077938 2561 1.454 0.700 - - - - - 0.754 - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
57. pitrm1 ENSDARG00000038563, ENSDARG00000115745 1321 1.453 - - - - - - 0.709 0.744 - pitrilysin metallopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2876]
58. adsl ENSDARG00000017049, ENSDARG00000111547, ENSDARG00000116659 1430 1.451 - - - - - 0.742 0.709 - - adenylosuccinate lyase [Source:ZFIN;Acc:ZDB-GENE-030131-6363]
59. zgpat ENSDARG00000027403 1071 1.448 0.707 - - - - - - 0.741 - zinc finger, CCCH-type with G patch domain [Source:ZFIN;Acc:ZDB-GENE-040426-1248]
60. metap1 ENSDARG00000033440, ENSDARG00000110334 6569 1.441 - - - - - 0.728 - 0.713 - methionyl aminopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-050626-124]
61. rab14 ENSDARG00000074246 4084 1.435 - - - - - 0.701 0.734 - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
62. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.43 - - - - - 0.705 0.725 - - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
63. BX322787.1 ENSDARG00000105779 381 1.42 - - - - - - 0.717 0.703 -
64. hapln1a ENSDARG00000089769 12334 1.409 0.701 - - - - - 0.708 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
65. nip7 ENSDARG00000059075 3964 1 - - - - 1.000 - - - - NIP7, nucleolar pre-rRNA processing protein [Source:ZFIN;Acc:ZDB-GENE-050522-256]
66. ncalda ENSDARG00000070688 5069 1 - - - - 1.000 - - - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
67. nrp2a_1 ENSDARG00000096546 3358 1 - - - - 1.000 - - - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
68. si:dkey-191j3.3 si:dkey-191j3.3 1987 1 - - - - 1.000 - - - -
69. pcgf6 ENSDARG00000069681 2382 1 - - - - 1.000 - - - - polycomb group ring finger 6 [Source:ZFIN;Acc:ZDB-GENE-060526-178]
70. snap25a ENSDARG00000020609 4537 1 - - - - 1.000 - - - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
71. acyp1 ENSDARG00000060126 2161 1 - - - - 1.000 - - - - acylphosphatase 1, erythrocyte (common) type [Source:ZFIN;Acc:ZDB-GENE-050309-125]
72. six3b ENSDARG00000054879 2416 1 - - - - 1.000 - - - - SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
73. C25H1orf51 C25H1orf51 2460 1 - - - - 1.000 - - - -
74. ptprnb ENSDARG00000077047 2743 0.999 - - - - 0.999 - - - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
75. tegt ENSDARG00000077934 27182 0.999 - - - - 0.999 - - - - testis enhanced gene transcript (BAX inhibitor 1) [Source:ZFIN;Acc:ZDB-GENE-030826-10]
76. phgdh ENSDARG00000001873 8325 0.999 - - - - 0.999 - - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
77. ppp5c ENSDARG00000034313 8794 0.999 - - - - 0.999 - - - - protein phosphatase 5, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-75]
78. furina ENSDARG00000062909, ENSDARG00000117158 6313 0.999 - - - - 0.999 - - - - furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
79. anxa1a ENSDARG00000026726 23173 0.998 - - - - 0.998 - - - - annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
80. sgut1 3470 0.998 - 0.998 - - - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, transcript variant X1
81. pgam5 ENSDARG00000035608 4044 0.997 - 0.997 - - - - - - - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
82. lum ENSDARG00000045580 5395 0.997 - 0.997 - - - - - - - lumican [Source:ZFIN;Acc:ZDB-GENE-040625-24]
83. upf3b ENSDARG00000000489, ENSDARG00000116719 2088 0.997 - 0.997 - - - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-040426-1630]
84. dazap1 ENSDARG00000070846, ENSDARG00000114578 525 0.997 - 0.997 - - - - - - - DAZ associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070212-1]
85. dda1 ENSDARG00000076074, ENSDARG00000109308 1993 0.997 - 0.997 - - - - - - - DET1 and DDB1 associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2137]
86. CR387996.1 ENSDARG00000097774 3037 0.997 - 0.997 - - - - - - -
87. igf2bp3 ENSDARG00000010266 5789 0.997 - 0.997 - - - - - - - insulin-like growth factor 2 mRNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-000308-1]
88. cep44 ENSDARG00000053106 683 0.997 - 0.997 - - - - - - - centrosomal protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-392]
89. cxcl12b ENSDARG00000055100, ENSDARG00000113088 4476 0.997 - 0.997 - - - - - - - chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030721-1]
90. FOXK2 ENSDARG00000030583 5500 0.997 - - - - 0.997 - - - - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
91. tmem209 ENSDARG00000039340 1598 0.997 - 0.997 - - - - - - - transmembrane protein 209 [Source:ZFIN;Acc:ZDB-GENE-030131-2879]
92. tdh ENSDARG00000002745 5344 0.997 - 0.997 - - - - - - - L-threonine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2379]
93. nsa2 ENSDARG00000007708 6329 0.997 - 0.997 - - - - - - - NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-488]
94. samd1a ENSDARG00000102810 1037 0.997 - 0.997 - - - - - - - sterile alpha motif domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061013-517]
95. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.997 - 0.997 - - - - - - - G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
96. uqcrq ENSDARG00000029064, ENSDARG00000116372 32190 0.997 - - - - 0.997 - - - - ubiquinol-cytochrome c reductase, complex III subunit VII [Source:ZFIN;Acc:ZDB-GENE-040718-199]
97. atp5h 18018 0.997 - - - - 0.997 - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
98. socs6b ENSDARG00000015863 1799 0.997 - 0.997 - - - - - - - suppressor of cytokine signaling 6b [Source:ZFIN;Acc:ZDB-GENE-030131-1670]
99. mcfd2 ENSDARG00000039757, ENSDARG00000109631, ENSDARG00000116502 1804 0.997 - 0.997 - - - - - - - multiple coagulation factor deficiency 2 [Source:ZFIN;Acc:ZDB-GENE-041010-8]
100. foxo1b ENSDARG00000061549 790 0.997 - 0.997 - - - - - - - forkhead box O1 b [Source:ZFIN;Acc:ZDB-GENE-080425-3]

There are 1682 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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