Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ndr2

Gene Name Gene ID Reads Annotation
ndr2 ENSDARG00000101279 2 nodal-related 2 [Source:ZFIN;Acc:ZDB-GENE-990415-181]










Genes with expression patterns similar to ndr2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ndr2 ENSDARG00000101279 2 3 - - - 1.000 1.000 1.000 - - - nodal-related 2 [Source:ZFIN;Acc:ZDB-GENE-990415-181]
2. si:ch73-119o17.1 si:ch73-119o17.1 6 2 - - - - 1.000 1.000 - - -
3. si:dkey-44g23.9 si:dkey-44g23.9 1 2 - - - - 1.000 1.000 - - -
4. si:ch211-139g16.8 ENSDARG00000093074 13 1.948 - - - - 1.000 0.948 - - - si:ch211-139g16.8 [Source:ZFIN;Acc:ZDB-GENE-100922-126]
5. FAM149A ENSDARG00000073709 7 1.753 - - - - 0.753 1.000 - - - family with sequence similarity 149 member A [Source:ZFIN;Acc:ZDB-GENE-081107-36]
6. plp1b ENSDARG00000011929 8 1.731 - - - 0.731 - 1.000 - - - proteolipid protein 1b [Source:ZFIN;Acc:ZDB-GENE-030710-6]
7. si:ch211-137i24.12 ENSDARG00000094537 35 1 - - - - - 1.000 - - - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
8. cpn1_1 ENSDARG00000005185, ENSDARG00000096728 2 1 - - - - 1.000 - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
9. si:ch211-202n12.3 si:ch211-202n12.3 0 1 - - - - 1.000 - - - -
10. CR759920.2 CR759920.2 1 1 - - - - 1.000 - - - -
11. si:dkey-118j18.3 si:dkey-118j18.3 4 1 - - - - 1.000 - - - -
12. BX511006.2 BX511006.2 29 1 - - - - - 1.000 - - -
13. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - - - 1.000 - - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
14. CELA1_3 CELA1_3 0 1 - - - - - 1.000 - - -
15. dicp1.1 ENSDARG00000091993, ENSDARG00000111013, ENSDARG00000114814 2 1 - - - - - 1.000 - - - diverse immunoglobulin domain-containing protein 1.1 [Source:ZFIN;Acc:ZDB-GENE-120305-1]
16. palmdb ENSDARG00000034321 75 1 - - - - - 1.000 - - - palmdelphin b [Source:ZFIN;Acc:ZDB-GENE-090713-3]
17. si:dkeyp-73d8.6 ENSDARG00000079589 1 1 - - - - 1.000 - - - - si:dkeyp-73d8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-683]
18. st3gal1 ENSDARG00000079654 4 1 - - - 1.000 - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
19. BX682552.2_1 BX682552.2_1 37 1 - - - - - 1.000 - - -
20. si:ch211-113e8.5 ENSDARG00000069707 0 1 - - - - 1.000 - - - - si:ch211-113e8.5 [Source:ZFIN;Acc:ZDB-GENE-090312-189]
21. crygm2d13 ENSDARG00000057460 1093 1 - - - - - 1.000 - - - crystallin, gamma M2d13 [Source:ZFIN;Acc:ZDB-GENE-040718-105]
22. kcnk2b ENSDARG00000007151 1 1 - - - - 1.000 - - - - potassium channel, subfamily K, member 2b [Source:ZFIN;Acc:ZDB-GENE-051120-69]
23. si:ch211-120k19.3 si:ch211-120k19.3 5 1 - - - - 1.000 - - - -
24. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1 - - - - - 1.000 - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
25. cx55.5 13 1 - - - - - 1.000 - - - connexin 55.5, transcript variant X1
26. cacna1bb ENSDARG00000079295, ENSDARG00000116562 1 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, N type, alpha 1B subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-4]
27. CR388046.2 ENSDARG00000105519 0 1 - - - - 1.000 - - - -
28. mpeg1 mpeg1 123 1 - - - - 1.000 - - - -
29. CU915778.1 ENSDARG00000099025 40 1 - - - - - 1.000 - - -
30. LARP4 LARP4 48 1 - - - - - 1.000 - - -
31. MDFI ENSDARG00000089564 8 1 - - - - 1.000 - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
32. AL929276.1 ENSDARG00000113065 0 1 - - - - 1.000 - - - -
33. zgc:113307 ENSDARG00000044894 17 1 - - - - 1.000 - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
34. nms 19 1 - - - - 1.000 - - - - neuromedin S, transcript variant X1
35. v2rh10 ENSDARG00000061883 0 1 - - - - 1.000 - - - - vomeronasal 2 receptor, h10 [Source:ZFIN;Acc:ZDB-GENE-050419-42]
36. abch1 ENSDARG00000071341 1 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family H, member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-42]
37. GPC5 GPC5 11 1 - - - - 1.000 - - - -
38. crygn2 ENSDARG00000030411 2551 1 - - - - - 1.000 - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
39. ccr12.2 ccr12.2 2 1 - - - - - 1.000 - - -
40. cel.2 ENSDARG00000029822 0 1 - - - - - 1.000 - - - carboxyl ester lipase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-061110-10]
41. FBXL21 FBXL21 6 1 - - - - - 1.000 - - -
42. QSOX2 ENSDARG00000077174 26 1 - - - - - 1.000 - - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
43. si:dkey-56d12.4 ENSDARG00000070845 2 1 - - - - 1.000 - - - - si:dkey-56d12.4 [Source:ZFIN;Acc:ZDB-GENE-060531-147]
44. ribc1 ENSDARG00000055739 32 1 - - - - - 1.000 - - - RIB43A domain with coiled-coils 1 [Source:ZFIN;Acc:ZDB-GENE-081031-7]
45. LAMB3 LAMB3 31 1 - - - - 1.000 - - - -
46. si:dkey-105f21.1 si:dkey-105f21.1 5 1 - - - - - 1.000 - - -
47. CABZ01048021.1 CABZ01048021.1 15 1 - - - - - 1.000 - - -
48. PLXNB2_1 PLXNB2_1 10 1 - - - - - 1.000 - - -
49. TAF4_1 TAF4_1 30 1 - - - - - 1.000 - - -
50. HIST1H4L ENSDARG00000101249, ENSDARG00000105318, ENSDARG00000105352, ENSDARG00000105353, ENSDARG00000105376, ENSDARG00000105382, ENSDARG00000105409, ENSDARG00000105482, ENSDARG00000110035, ENSDARG00000110152, ENSDARG00000110812, ENSDARG00000111165, ENSDARG00000111247, ENSDARG00000111494, ENSDARG00000111501, ENSDARG00000111619, ENSDARG00000111753, ENSDARG00000112491, ENSDARG00000112528, ENSDARG00000112954, ENSDARG00000114534, ENSDARG00000115054, ENSDARG00000115281, ENSDARG00000115799, ENSDARG00000116781 3 1 - - - - 1.000 - - - - histone 1, H4, like [Source:ZFIN;Acc:ZDB-GENE-070927-10]
51. btr06 ENSDARG00000054184 1 1 - - - - - 1.000 - - - bloodthirsty-related gene family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080516-2]
52. rspo4 ENSDARG00000038593 3 1 - - - - - 1.000 - - - R-spondin 4 [Source:ZFIN;Acc:ZDB-GENE-110103-2]
53. CR354382.1 CR354382.1 42 1 - - - - - 1.000 - - -
54. rnf217 ENSDARG00000060944 10 1 - - - - - 1.000 - - - ring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
55. CU570987.1 CU570987.1 7 1 - - - - - 1.000 - - -
56. si:dkeyp-50f5.4 si:dkeyp-50f5.4 0 1 - - - - 1.000 - - - -
57. si:dkey-256e21.1 si:dkey-256e21.1 11 1 - - - - 1.000 - - - -
58. CR352260.1 CR352260.1 11 1 - - - - 1.000 - - - -
59. si:dkey-156k2.8 ENSDARG00000087743 0 1 - - - - 1.000 - - - - si:dkey-156k2.8 [Source:ZFIN;Acc:ZDB-GENE-110914-111]
60. si:dkey-34f16.9 si:dkey-34f16.9 1 1 - - - - - 1.000 - - -
61. usp34 0 1 - - - - 1.000 - - - - ubiquitin specific peptidase 34
62. SQLE SQLE 1 1 - - - - - 1.000 - - -
63. gna15.3 ENSDARG00000056654, ENSDARG00000092948 9 1 - - - 1.000 - - - - - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-050208-700]
64. IQCK ENSDARG00000076831, ENSDARG00000112508 6 1 - - - - 1.000 - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
65. si:dkey-4p15.4 ENSDARG00000096658 0 1 - - - - 1.000 - - - - si:dkey-4p15.4 [Source:ZFIN;Acc:ZDB-GENE-121214-305]
66. slc13a5 slc13a5 15 1 - - - - - 1.000 - - -
67. si:dkey-188i13.7 ENSDARG00000078389 81 1 - - - - 1.000 - - - - si:dkey-188i13.7 [Source:ZFIN;Acc:ZDB-GENE-090312-190]
68. fgd1 ENSDARG00000100402 18 1 - - - - 1.000 - - - - FYVE, RhoGEF and PH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-33]
69. VWDE_1 VWDE_1 2 1 - - - - 1.000 - - - -
70. si:ch211-12e13.2 si:ch211-12e13.2 3 1 - - - - - 1.000 - - -
71. casp6l2 ENSDARG00000070368, ENSDARG00000111446 1 1 - - - - 1.000 - - - - caspase 6, apoptosis-related cysteine peptidase, like 2 [Source:ZFIN;Acc:ZDB-GENE-060312-12]
72. sh2b3 ENSDARG00000069958 0 1 - - - - 1.000 - - - - SH2B adaptor protein 3 [Source:ZFIN;Acc:ZDB-GENE-041210-359]
73. PLD4 1 1 - - - - 1.000 - - - - phospholipase D family member 4
74. pmch ENSDARG00000073959 1 1 - - - - 1.000 - - - - pro-melanin-concentrating hormone [Source:ZFIN;Acc:ZDB-GENE-041210-150]
75. CABZ01002768.1 ENSDARG00000098901 2 1 - - - - - 1.000 - - -
76. CABZ01059099.1 ENSDARG00000067927 1 1 - - - - 1.000 - - - - protein eva-1 homolog A-like [Source:NCBI gene;Acc:101882949]
77. si:dkey-208a9.1 si:dkey-208a9.1 3 1 - - - - 1.000 - - - -
78. AL954132.1 AL954132.1 1 1 - - - - - 1.000 - - -
79. ca10b ENSDARG00000009568 8 1 - - - - 1.000 - - - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
80. VSIG10L ENSDARG00000089237 12 1 - - - - - 1.000 - - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
81. si:zfos-2548d7.1 si:zfos-2548d7.1 3 1 - - - - 1.000 - - - -
82. CR774179.1 ENSDARG00000086969 3 1 - - - - 1.000 - - - -
83. si:ch211-169j7.3 si:ch211-169j7.3 4 1 - - - - - 1.000 - - -
84. AL935186.6 ENSDARG00000112275 5 1 - - - - 1.000 - - - -
85. PDE4A ENSDARG00000032344 1 1 - - - - 1.000 - - - - phosphodiesterase 4A, cAMP-specific [Source:ZFIN;Acc:ZDB-GENE-131125-7]
86. si:dkey-39e8.5 si:dkey-39e8.5 2 1 - - - - - 1.000 - - -
87. gcdhl gcdhl 38 1 - - - - - 1.000 - - -
88. CR855307.2 CR855307.2 1 1 - - - - 1.000 - - - -
89. pdx1 ENSDARG00000002779, ENSDARG00000109275 28 1 - - - - - 1.000 - - - pancreatic and duodenal homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-122]
90. si:dkey-79c1.1 ENSDARG00000093179 11 1 - - - - - 1.000 - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
91. si:dkey-47k20.1 ENSDARG00000092523 2 1 - - - - 1.000 - - - - si:dkey-47k20.1 [Source:ZFIN;Acc:ZDB-GENE-060503-641]
92. entpd8 ENSDARG00000005565 18 1 - - - - - 1.000 - - - ectonucleoside triphosphate diphosphohydrolase 8 [Source:ZFIN;Acc:ZDB-GENE-040724-142]
93. slc44a5a ENSDARG00000017398 5 1 - - - - 1.000 - - - - solute carrier family 44, member 5a [Source:ZFIN;Acc:ZDB-GENE-070705-333]
94. si:ch211-223a10.3 si:ch211-223a10.3 3 1 - - - - - 1.000 - - -
95. PIK3CA ENSDARG00000075456 39 1 - - - - - 1.000 - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha [Source:ZFIN;Acc:ZDB-GENE-130409-1]
96. SYPL1 ENSDARG00000077356 1 1 - - - - 1.000 - - - - synaptophysin-like 1 [Source:ZFIN;Acc:ZDB-GENE-110420-2]
97. radil ENSDARG00000079779 14 1 - - - - 1.000 - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
98. smtlb ENSDARG00000017251 7 1 - - - - 1.000 - - - - somatolactin beta [Source:ZFIN;Acc:ZDB-GENE-060123-1]
99. si:ch211-238e22.8 ENSDARG00000104804, ENSDARG00000105161 0 1 - - - - - 1.000 - - - si:ch211-238e22.8 [Source:ZFIN;Acc:ZDB-GENE-050419-231]
100. si:dkey-190j3.4 ENSDARG00000100743 1 1 - - - - - 1.000 - - - si:dkey-190j3.4 [Source:ZFIN;Acc:ZDB-GENE-070424-218]

There are 514 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA