Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ndr1

Gene Name Gene ID Reads Annotation
ndr1 ENSDARG00000057096, ENSDARG00000116539 10 nodal-related 1 [Source:ZFIN;Acc:ZDB-GENE-990415-256]










Genes with expression patterns similar to ndr1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ndr1 ENSDARG00000057096, ENSDARG00000116539 10 5 1.000 1.000 1.000 1.000 1.000 - - - - nodal-related 1 [Source:ZFIN;Acc:ZDB-GENE-990415-256]
2. xrra1 ENSDARG00000089578 18 1.91 0.919 - - - 0.991 - - - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
3. si:dkey-69c19.1 si:dkey-69c19.1 37 1.905 0.919 0.986 - - - - - - -
4. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1.905 0.919 0.986 - - - - - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
5. nisch ENSDARG00000043077 11 1.905 0.919 0.986 - - - - - - - nischarin [Source:ZFIN;Acc:ZDB-GENE-050208-570]
6. myo1f ENSDARG00000078734 100 1.905 0.919 0.986 - - - - - - - myosin IF [Source:ZFIN;Acc:ZDB-GENE-081104-506]
7. Mar-03 Mar-03 44 1.905 0.919 0.986 - - - - - - -
8. hamp2 hamp2 67 1.905 0.919 0.986 - - - - - - -
9. si:dkeyp-86f8.2 si:dkeyp-86f8.2 5 1.893 0.919 - - 0.974 - - - - -
10. adrb3b ENSDARG00000052919 16 1.848 0.919 - - - 0.929 - - - - adrenoceptor beta 3b [Source:ZFIN;Acc:ZDB-GENE-081022-154]
11. si:ch211-197h24.7 si:ch211-197h24.7 25 1.834 - 0.916 0.918 - - - - - -
12. ccr12.3 ccr12.3 79 1.819 - 0.986 0.833 - - - - - -
13. stx3a ENSDARG00000001880 69 1.791 0.919 - 0.872 - - - - - - syntaxin 3A [Source:ZFIN;Acc:ZDB-GENE-040426-1489]
14. oaz2b ENSDARG00000059815 38 1.663 - 0.726 0.937 - - - - - - ornithine decarboxylase antizyme 2b [Source:ZFIN;Acc:ZDB-GENE-070313-1]
15. si:dkey-101d6.4 si:dkey-101d6.4 6 1.66 0.919 0.741 - - - - - - -
16. Metazoa_SRP_23 Metazoa_SRP_23 3 1 - - 1.000 - - - - - -
17. si:ch73-344o19.1 ENSDARG00000096791 1 1 - - - 1.000 - - - - - si:ch73-344o19.1 [Source:ZFIN;Acc:ZDB-GENE-081104-282]
18. PPHLN1 ENSDARG00000045692 4 1 - - 1.000 - - - - - - periphilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1873]
19. LRRC2 LRRC2 23 1 - - 1.000 - - - - - -
20. aqp10a ENSDARG00000007086, ENSDARG00000112181 8 1 - - - 1.000 - - - - - aquaporin 10a [Source:ZFIN;Acc:ZDB-GENE-040718-40]
21. si:ch211-197l9.5 ENSDARG00000086679 2 1 - - - 1.000 - - - - - si:ch211-197l9.5 [Source:ZFIN;Acc:ZDB-GENE-091204-323]
22. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1 - - - 1.000 - - - - -
23. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 1 - - 1.000 - - - - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
24. si:dkey-203o14.2 si:dkey-203o14.2 5 1 - - - 1.000 - - - - -
25. eva1bb ENSDARG00000100698 223 1 - 1.000 - - - - - - - eva-1 homolog Bb (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-080204-108]
26. sync ENSDARG00000035944 8 1 - - 1.000 - - - - - - syncoilin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-060503-747]
27. KCNJ16 ENSDARG00000045039 59 1 - - - 1.000 - - - - - potassium inwardly-rectifying channel, subfamily J, member 16 [Source:ZFIN;Acc:ZDB-GENE-130603-81]
28. PATL2 PATL2 10 1 - - 1.000 - - - - - -
29. MTSS1L MTSS1L 7 1 - - - 1.000 - - - - -
30. CR932358.2 CR932358.2 15 1 - - 1.000 - - - - - -
31. si:dkey-85n7.9 si:dkey-85n7.9 1 1 - - 1.000 - - - - - -
32. zgc:112408 ENSDARG00000016207, ENSDARG00000116632, ENSDARG00000117067 19 1 - - 1.000 - - - - - - zgc:112408 [Source:ZFIN;Acc:ZDB-GENE-050417-63]
33. si:dkeyp-85d8.4 si:dkeyp-85d8.4 1 1 - - - 1.000 - - - - -
34. LAMB3 LAMB3 31 1 - - - 1.000 - - - - -
35. dnaaf3 ENSDARG00000092662 20 1 - - 1.000 - - - - - - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
36. si:ch211-132b12.1 ENSDARG00000061480 3 1 - - 1.000 - - - - - - si:ch211-132b12.1 [Source:ZFIN;Acc:ZDB-GENE-050420-315]
37. ggh ENSDARG00000037176 9 1 - - 1.000 - - - - - - gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) [Source:ZFIN;Acc:ZDB-GENE-040426-2615]
38. CU184832.2 CU184832.2 35 1 - - - 1.000 - - - - -
39. CABZ01061914.2 CABZ01061914.2 2 1 - - - 1.000 - - - - -
40. LAMA3 ENSDARG00000071462 5 1 - - - 1.000 - - - - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
41. DLG4 3 1 - - - 1.000 - - - - - discs large MAGUK scaffold protein 4, transcript variant X5
42. Metazoa_SRP_24 Metazoa_SRP_24 4 1 - - 1.000 - - - - - -
43. rprml ENSDARG00000056768 18 1 - - 1.000 - - - - - - reprimo-like [Source:ZFIN;Acc:ZDB-GENE-070615-20]
44. si:ch73-27e22.2 ENSDARG00000092266 8 1 - - - 1.000 - - - - - si:ch73-27e22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-230]
45. HTRA2_9 HTRA2_9 1 1 - - 1.000 - - - - - -
46. C17H8orf74 C17H8orf74 4 1 - - - 1.000 - - - - -
47. CR847893.2 CR847893.2 2 1 - - 1.000 - - - - - -
48. si:ch211-42d10.5 si:ch211-42d10.5 17 1 - - - 1.000 - - - - -
49. NYAP2 NYAP2 7 1 - - - 1.000 - - - - -
50. si:dkey-224b4.5 3 1 - - - 1.000 - - - - - si:dkey-224b4.5, transcript variant X5
51. si:dkey-11o15.4 1 1 - - - 1.000 - - - - - si:dkey-11o15.4, transcript variant X2
52. cnih3 ENSDARG00000014953 25 0.995 - - 0.995 - - - - - - cornichon family AMPA receptor auxiliary protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-180]
53. vwa5b2 ENSDARG00000075886 3 0.995 - - - - 0.995 - - - - von Willebrand factor A domain containing 5B2 [Source:ZFIN;Acc:ZDB-GENE-070912-216]
54. snapc1a ENSDARG00000029569 25 0.995 - - - - 0.995 - - - - small nuclear RNA activating complex, polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1031]
55. znf804b ENSDARG00000103396 11 0.995 - - - - 0.995 - - - - zinc finger protein 804B [Source:ZFIN;Acc:ZDB-GENE-100922-265]
56. ankrd31 ENSDARG00000052731, ENSDARG00000112162 9 0.995 - - - - 0.995 - - - - ankyrin repeat domain 31 [Source:ZFIN;Acc:ZDB-GENE-050417-473]
57. ANKRD34C 13 0.995 - - - - 0.995 - - - - ankyrin repeat domain 34C
58. si:dkeyp-104f11.5 si:dkeyp-104f11.5 30 0.993 - - - - 0.993 - - - -
59. akt3a_1 ENSDARG00000104810 12 0.993 - - - - 0.993 - - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
60. sst6 ENSDARG00000093804, ENSDARG00000116656 31 0.992 - - 0.992 - - - - - - somatostatin 6 [Source:ZFIN;Acc:ZDB-GENE-081022-199]
61. si:dkeyp-34c12.1 ENSDARG00000071083, ENSDARG00000113229 6 0.992 - - - - 0.992 - - - - si:dkeyp-34c12.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5347]
62. si:dkey-47k20.2 ENSDARG00000056006 4 0.991 - - - - 0.991 - - - - si:dkey-47k20.2 [Source:ZFIN;Acc:ZDB-GENE-060503-735]
63. sc:d0661 sc:d0661 12 0.991 - - - - 0.991 - - - -
64. C12H17orf70 C12H17orf70 25 0.99 - - - - 0.990 - - - -
65. MBLAC1 ENSDARG00000077314 1 0.987 - - 0.987 - - - - - - metallo-beta-lactamase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111102-2]
66. cnn1a ENSDARG00000017193 6 0.987 - 0.987 - - - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
67. mvb12ba ENSDARG00000091619 18 0.987 - 0.987 - - - - - - - multivesicular body subunit 12Ba [Source:ZFIN;Acc:ZDB-GENE-060929-372]
68. si:dkeyp-80c12.4 ENSDARG00000036479 7 0.987 - 0.987 - - - - - - - si:dkeyp-80c12.4 [Source:ZFIN;Acc:ZDB-GENE-090313-403]
69. si:ch211-153l6.4 si:ch211-153l6.4 45 0.987 - 0.987 - - - - - - -
70. RECK ENSDARG00000090039 15 0.987 - - - - 0.987 - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
71. RDM1 RDM1 28 0.987 - 0.987 - - - - - - -
72. tcte1 ENSDARG00000077387 2 0.987 - - 0.987 - - - - - - t-complex-associated-testis-expressed 1 [Source:ZFIN;Acc:ZDB-GENE-120406-12]
73. si:ch211-258f1.3 ENSDARG00000105119 23 0.987 - 0.987 - - - - - - - si:ch211-258f1.3 [Source:ZFIN;Acc:ZDB-GENE-070912-252]
74. slc5a12 ENSDARG00000005004 15 0.986 - 0.986 - - - - - - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
75. FBXL6 ENSDARG00000077227 28 0.986 - 0.986 - - - - - - - F-box and leucine-rich repeat protein 6 [Source:ZFIN;Acc:ZDB-GENE-060810-162]
76. U6_19 U6_19 1 0.986 - 0.986 - - - - - - -
77. plxnc1 ENSDARG00000015278 501 0.986 - 0.986 - - - - - - - plexin C1 [Source:ZFIN;Acc:ZDB-GENE-030131-1620]
78. CABZ01053592.1 ENSDARG00000117388 6 0.986 - 0.986 - - - - - - -
79. si:dkey-228i19.32 si:dkey-228i19.32 9 0.986 - 0.986 - - - - - - -
80. gng2_1 ENSDARG00000056831 113 0.986 - 0.986 - - - - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
81. stxbp4 ENSDARG00000076997 20 0.986 - 0.986 - - - - - - - syntaxin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-110420-5]
82. CCDC18_1 CCDC18_1 3 0.986 - 0.986 - - - - - - -
83. cdca9 ENSDARG00000088639, ENSDARG00000113114 3 0.986 - 0.986 - - - - - - - cell division cycle associated 9 [Source:ZFIN;Acc:ZDB-GENE-090706-4]
84. slc44a1a ENSDARG00000015946 10 0.986 - 0.986 - - - - - - - solute carrier family 44 (choline transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050417-204]
85. zgc:173652 22 0.986 - 0.986 - - - - - - - zgc:173652
86. KCNJ3 KCNJ3 24 0.986 - 0.986 - - - - - - -
87. pik3r5 ENSDARG00000102762 56 0.986 - 0.986 - - - - - - - phosphoinositide-3-kinase, regulatory subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2308]
88. dpyda dpyda 12 0.986 - 0.986 - - - - - - -
89. si:dkey-5n18.1 ENSDARG00000043436 220 0.986 - 0.986 - - - - - - - si:dkey-5n18.1 [Source:ZFIN;Acc:ZDB-GENE-041014-144]
90. mir142a 20 0.986 - 0.986 - - - - - - - microRNA 142a
91. RNF122 RNF122 29 0.986 - 0.986 - - - - - - -
92. FP236810.3 FP236810.3 1 0.986 - 0.986 - - - - - - -
93. COX5B ENSDARG00000015978 70 0.986 - 0.986 - - - - - - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
94. si:rp71-26b20.1 si:rp71-26b20.1 11 0.986 - 0.986 - - - - - - -
95. rxfp3.2a 11 0.986 - 0.986 - - - - - - - relaxin/insulin-like family peptide receptor 3.2a
96. si:dkey-188i13.10 ENSDARG00000075151 22 0.986 - 0.986 - - - - - - - si:dkey-188i13.10 [Source:ZFIN;Acc:ZDB-GENE-090313-208]
97. MFAP4_6 MFAP4_6 162 0.986 - 0.986 - - - - - - -
98. irf8 ENSDARG00000056407 85 0.986 - 0.986 - - - - - - - interferon regulatory factor 8 [Source:ZFIN;Acc:ZDB-GENE-040718-367]
99. si:dkeyp-27e10.7 si:dkeyp-27e10.7 5 0.986 - 0.986 - - - - - - -
100. ABCC3 ENSDARG00000096662 15 0.986 - 0.986 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 3 [Source:ZFIN;Acc:ZDB-GENE-050517-16]

There are 700 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA