Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nde1

Gene Name Gene ID Reads Annotation
nde1 ENSDARG00000103902 557 nudE neurodevelopment protein 1 [Source:ZFIN;Acc:ZDB-GENE-050913-61]










Genes with expression patterns similar to nde1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nde1 ENSDARG00000103902 557 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nudE neurodevelopment protein 1 [Source:ZFIN;Acc:ZDB-GENE-050913-61]
2. ankhb ENSDARG00000014969 328 1.626 - - - - - 0.800 0.826 - - ANKH inorganic pyrophosphate transport regulator b [Source:ZFIN;Acc:ZDB-GENE-030131-2458]
3. kdm5bb ENSDARG00000003098 531 1.625 - 0.888 - - - - 0.737 - - lysine (K)-specific demethylase 5Bb [Source:ZFIN;Acc:ZDB-GENE-030424-1]
4. SHF SHF 92 1.622 - 0.869 - - - - 0.753 - -
5. abhd16a ENSDARG00000078929 1115 1.616 - - - - - 0.844 0.772 - - abhydrolase domain containing 16A [Source:ZFIN;Acc:ZDB-GENE-010601-2]
6. RPH3A RPH3A 309 1.608 - 0.828 - - - 0.780 - - -
7. DVL3 1098 1.603 - 0.778 - - - 0.825 - - - dishevelled segment polarity protein 3
8. ctdspl2b ENSDARG00000060586 1682 1.596 - 0.778 - - - 0.818 - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1809]
9. ecd ENSDARG00000022944, ENSDARG00000114710 273 1.579 - 0.794 - - - - 0.785 - - ecdysoneless homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6304]
10. slc25a36b ENSDARG00000015915 1750 1.538 - - - - - 0.762 0.776 - - solute carrier family 25 (pyrimidine nucleotide carrier ), member 36b [Source:ZFIN;Acc:ZDB-GENE-080219-28]
11. CDH8 172 1.533 - - - - - 0.774 0.759 - - cadherin 8
12. zgc:112038 ENSDARG00000046140 73 1.515 - 0.790 - - - - 0.725 - - zgc:112038 [Source:ZFIN;Acc:ZDB-GENE-050522-271]
13. dusp7 ENSDARG00000101413 1307 1.51 - 0.776 - - - - 0.734 - - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
14. zgc:114046 ENSDARG00000091728 68 1.492 - 0.791 - - - - 0.701 - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
15. nudt5 ENSDARG00000078073 779 1.486 - - - - - 0.700 0.786 - - nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:ZFIN;Acc:ZDB-GENE-040625-63]
16. HIST1H4J HIST1H4J 31 1.478 - 0.760 - - - - 0.718 - -
17. CU570684.5 CU570684.5 55 1.464 - 0.756 - - - - 0.708 - -
18. prrx1b ENSDARG00000042027 1128 1.451 - - - - - 0.741 0.710 - - paired related homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9033]
19. smad5 ENSDARG00000037238 1684 1.438 - - - - - - 0.725 0.713 - SMAD family member 5 [Source:ZFIN;Acc:ZDB-GENE-990603-9]
20. magoh ENSDARG00000038635, ENSDARG00000109837 2880 1.433 0.701 - - - - - 0.732 - - mago homolog, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-041216-1]
21. tnni2a.2 ENSDARG00000005841 483 1.43 - 0.707 - - - - 0.723 - - troponin I type 2a (skeletal, fast), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-970]
22. dlx6a ENSDARG00000042291 185 1.418 - 0.700 - - - - 0.718 - - distal-less homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-980526-448]
23. snf8 ENSDARG00000058076 384 0.937 - 0.937 - - - - - - - SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-117]
24. mir10b-2 116 0.937 - 0.937 - - - - - - - microRNA 10b-2
25. phf20b ENSDARG00000038737, ENSDARG00000111662, ENSDARG00000116554 1385 0.928 - - - - - - 0.928 - - PHD finger protein 20, b [Source:ZFIN;Acc:ZDB-GENE-040822-33]
26. hps4 ENSDARG00000013795 246 0.92 - 0.920 - - - - - - - Hermansky-Pudlak syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1068]
27. si:rp71-1g18.1 ENSDARG00000053792, ENSDARG00000111192 437 0.915 - 0.915 - - - - - - - si:rp71-1g18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5470]
28. KLHL7 ENSDARG00000101445 684 0.913 - - - - - 0.913 - - - kelch-like family member 7 [Source:ZFIN;Acc:ZDB-GENE-130212-1]
29. rab3c ENSDARG00000014462, ENSDARG00000042803 508 0.904 - - - - - - 0.904 - - RAB3C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-263]
30. B3GALT1 B3GALT1 159 0.897 - 0.897 - - - - - - -
31. idua ENSDARG00000062904 105 0.896 - 0.896 - - - - - - - iduronidase, alpha-L- [Source:ZFIN;Acc:ZDB-GENE-060526-29]
32. disp1 ENSDARG00000044417 603 0.894 - 0.894 - - - - - - - dispatched homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030911-7]
33. scarb1 ENSDARG00000101557 503 0.892 - 0.892 - - - - - - - scavenger receptor class B, member 1 [Source:ZFIN;Acc:ZDB-GENE-031126-1]
34. si:dkey-56e3.3 ENSDARG00000075194 491 0.888 - 0.888 - - - - - - - si:dkey-56e3.3 [Source:ZFIN;Acc:ZDB-GENE-050411-91]
35. FAM84B ENSDARG00000032859, ENSDARG00000116831 127 0.888 - 0.888 - - - - - - - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
36. si:dkey-17e16.8 284 0.887 - - - - - - 0.887 - - si:dkey-17e16.8
37. map3k4 ENSDARG00000104835 34 0.886 - 0.886 - - - - - - - mitogen-activated protein kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-990603-4]
38. CLDND1 CLDND1 155 0.883 - 0.883 - - - - - - -
39. trap1_1 ENSDARG00000024317, ENSDARG00000114173 480 0.883 - 0.883 - - - - - - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
40. vasna ENSDARG00000099266, ENSDARG00000111629 488 0.881 - - - - - - 0.881 - - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
41. ZBTB11 ENSDARG00000017886 817 0.879 - 0.879 - - - - - - - zinc finger and BTB domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5055]
42. C18H16orf70 C18H16orf70 542 0.878 - - - - - - 0.878 - -
43. CABZ01117079.1 CABZ01117079.1 123 0.877 - 0.877 - - - - - - -
44. MPPED1 ENSDARG00000088181 117 0.876 - 0.876 - - - - - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
45. daam2 ENSDARG00000028393 226 0.875 - 0.875 - - - - - - - dishevelled associated activator of morphogenesis 2 [Source:ZFIN;Acc:ZDB-GENE-070709-1]
46. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 0.871 - - - - - - 0.871 - - CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
47. zgc:113220 ENSDARG00000014775 235 0.87 - 0.870 - - - - - - - zgc:113220 [Source:ZFIN;Acc:ZDB-GENE-050320-64]
48. MAN2A2 ENSDARG00000063101 922 0.87 - 0.870 - - - - - - - mannosidase, alpha, class 2A, member 2 [Source:ZFIN;Acc:ZDB-GENE-110331-1]
49. sorbs2a ENSDARG00000003046 242 0.869 - 0.869 - - - - - - - sorbin and SH3 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-070308-2]
50. trove2 ENSDARG00000089225 430 0.868 - 0.868 - - - - - - - TROVE domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-051113-300]
51. PEG3_41 PEG3_41 124 0.867 - 0.867 - - - - - - -
52. parp16 ENSDARG00000018593 873 0.867 - 0.867 - - - - - - - poly (ADP-ribose) polymerase family, member 16 [Source:ZFIN;Acc:ZDB-GENE-040426-2289]
53. STK31 ENSDARG00000056339 37 0.863 - 0.863 - - - - - - - serine/threonine kinase 31 [Source:ZFIN;Acc:ZDB-GENE-140106-59]
54. gnai2b ENSDARG00000017294 686 0.863 - 0.863 - - - - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5861]
55. si:dkey-72l17.6 ENSDARG00000102008 42 0.863 - 0.863 - - - - - - - si:dkey-72l17.6 [Source:ZFIN;Acc:ZDB-GENE-110913-49]
56. si:dkeyp-13a3.9 si:dkeyp-13a3.9 362 0.862 - 0.862 - - - - - - -
57. scamp5 scamp5 797 0.862 - 0.862 - - - - - - -
58. fam107b ENSDARG00000026865, ENSDARG00000113209, ENSDARG00000116517 861 0.862 - - - - - 0.862 - - - family with sequence similarity 107, member B [Source:ZFIN;Acc:ZDB-GENE-031030-12]
59. ndor1 ENSDARG00000007429 113 0.862 - 0.862 - - - - - - - NADPH dependent diflavin oxidoreductase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1555]
60. si:dkey-178e17.3 ENSDARG00000058658 271 0.862 - - - - - 0.862 - - - si:dkey-178e17.3 [Source:ZFIN;Acc:ZDB-GENE-081104-335]
61. pdcd2 ENSDARG00000007892 223 0.861 - 0.861 - - - - - - - programmed cell death 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1236]
62. uspl1 ENSDARG00000034825, ENSDARG00000109866 457 0.861 - 0.861 - - - - - - - ubiquitin specific peptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-040930-7]
63. csrp2bp 2642 0.861 - 0.861 - - - - - - - csrp2 binding protein
64. snap25b ENSDARG00000058117 469 0.861 - 0.861 - - - - - - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
65. ccdc130 ENSDARG00000041533, ENSDARG00000113467 281 0.86 - 0.860 - - - - - - - coiled-coil domain containing 130 [Source:ZFIN;Acc:ZDB-GENE-040912-36]
66. slc35b1 ENSDARG00000038213 465 0.859 - 0.859 - - - - - - - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
67. LYRM9 ENSDARG00000075528 329 0.858 - - - - - 0.858 - - - LYR motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-081022-28]
68. fbxl14b ENSDARG00000045801 965 0.857 - - - - - 0.857 - - - F-box and leucine-rich repeat protein 14b [Source:ZFIN;Acc:ZDB-GENE-030131-3556]
69. brf1b ENSDARG00000005002, ENSDARG00000115325 276 0.857 - - - - - - 0.857 - - BRF1, RNA polymerase III transcription initiation factor b [Source:ZFIN;Acc:ZDB-GENE-030131-6248]
70. rusc1 ENSDARG00000078125 617 0.857 - 0.857 - - - - - - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
71. KIF3A ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 95 0.856 - 0.856 - - - - - - - kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]
72. NUMA1_2 NUMA1_2 2897 0.855 - 0.855 - - - - - - -
73. brms1la ENSDARG00000006235 2011 0.855 - 0.855 - - - - - - - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
74. si:ch211-67e16.11 ENSDARG00000095580 635 0.855 - 0.855 - - - - - - - si:ch211-67e16.11 [Source:ZFIN;Acc:ZDB-GENE-030131-7044]
75. gabrg2 ENSDARG00000053665 434 0.854 - 0.854 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
76. TGIF2 TGIF2 22 0.854 - 0.854 - - - - - - -
77. CABZ01064069.1 CABZ01064069.1 219 0.853 - 0.853 - - - - - - -
78. coro1b ENSDARG00000008660 1220 0.853 - 0.853 - - - - - - - coronin, actin binding protein, 1B [Source:ZFIN;Acc:ZDB-GENE-040123-3]
79. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 0.852 - - - - - 0.852 - - - discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
80. tbx16 ENSDARG00000007329 255 0.852 - 0.852 - - - - - - - T-box 16 [Source:ZFIN;Acc:ZDB-GENE-990615-5]
81. DHRS13 DHRS13 218 0.851 - 0.851 - - - - - - -
82. mibp_1 ENSDARG00000101362 193 0.851 - 0.851 - - - - - - - muscle-specific beta 1 integrin binding protein [Source:ZFIN;Acc:ZDB-GENE-030404-1]
83. baz1a ENSDARG00000063233, ENSDARG00000099745 563 0.851 - 0.851 - - - - - - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
84. PARM1 ENSDARG00000114063 58 0.85 - 0.850 - - - - - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]
85. wash wash 172 0.85 - - - - - - 0.850 - -
86. mcm3 ENSDARG00000024204 20 0.85 - 0.850 - - - - - - - minichromosome maintenance complex component 3 [Source:ZFIN;Acc:ZDB-GENE-020419-4]
87. si:dkey-226l10.6 ENSDARG00000087483 1651 0.848 - - - - - 0.848 - - - si:dkey-226l10.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1550]
88. st3gal5l st3gal5l 355 0.848 - 0.848 - - - - - - -
89. suz12a ENSDARG00000070256 2229 0.846 - 0.846 - - - - - - - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
90. wrap73 ENSDARG00000009557 515 0.846 - 0.846 - - - - - - - WD repeat containing, antisense to TP73 [Source:ZFIN;Acc:ZDB-GENE-030131-6313]
91. tpm4b ENSDARG00000019128 450 0.845 - 0.845 - - - - - - - tropomyosin 4b [Source:ZFIN;Acc:ZDB-GENE-030131-2964]
92. NPBWR2 NPBWR2 132 0.845 - 0.845 - - - - - - -
93. adrb2b ENSDARG00000054510, ENSDARG00000111730 428 0.844 - 0.844 - - - - - - - adrenoceptor beta 2, surface b [Source:ZFIN;Acc:ZDB-GENE-070410-32]
94. CU694324.1 CU694324.1 257 0.843 - 0.843 - - - - - - -
95. atp8b1 ENSDARG00000060980 181 0.843 - 0.843 - - - - - - - ATPase phospholipid transporting 8B1 [Source:ZFIN;Acc:ZDB-GENE-091116-14]
96. heatr1_1 ENSDARG00000099742 45 0.843 - 0.843 - - - - - - - HEAT repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6378]
97. zgc:110821 ENSDARG00000077085 210 0.843 - 0.843 - - - - - - - zgc:110821 [Source:ZFIN;Acc:ZDB-GENE-050227-8]
98. bcl9 ENSDARG00000036687 1124 0.843 - - - - - - 0.843 - - B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
99. PDXK PDXK 224 0.843 - 0.843 - - - - - - -
100. adamts9 ENSDARG00000077778 419 0.843 - 0.843 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 9 [Source:ZFIN;Acc:ZDB-GENE-070814-6]

There are 837 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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