Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ncaldb

Gene Name Gene ID Reads Annotation
ncaldb ENSDARG00000011334 123 neurocalcin delta b [Source:ZFIN;Acc:ZDB-GENE-040808-37]










Genes with expression patterns similar to ncaldb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ncaldb ENSDARG00000011334 123 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 neurocalcin delta b [Source:ZFIN;Acc:ZDB-GENE-040808-37]
2. ids ENSDARG00000071699 265 2.401 - 0.846 - - - 0.731 - 0.824 - iduronate 2-sulfatase [Source:ZFIN;Acc:ZDB-GENE-061215-37]
3. si:ch73-211l2.1 605 2.387 - - - - - - 0.765 0.863 0.759 si:ch73-211l2.1
4. scamp2l ENSDARG00000017010 491 2.386 - - - - - 0.710 - 0.839 0.837 secretory carrier membrane protein 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-6432]
5. rapgef5a ENSDARG00000075271 282 2.314 - - - - - 0.748 0.781 - 0.785 Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
6. mllt3 ENSDARG00000006754 985 2.278 - - - - - 0.795 0.783 - 0.700 MLLT3, super elongation complex subunit [Source:ZFIN;Acc:ZDB-GENE-050417-356]
7. gltpd2 ENSDARG00000067889, ENSDARG00000114510 27 1.886 1.000 0.886 - - - - - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
8. acot11b ENSDARG00000042122 235 1.816 - - - - - 0.954 0.862 - - acyl-CoA thioesterase 11b [Source:ZFIN;Acc:ZDB-GENE-051127-37]
9. sphk2 ENSDARG00000069893 1518 1.783 - - - - - 0.926 0.857 - - sphingosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-100922-225]
10. si:ch211-219f7.3 si:ch211-219f7.3 48 1.779 0.895 - - - - 0.884 - - -
11. RCVRN_1 RCVRN_1 46 1.764 - - - - - - - 0.897 0.867
12. ETV3L ETV3L 67 1.763 - - - - - - - 0.898 0.865
13. sagb ENSDARG00000038378 28 1.759 - - - - - - - 0.892 0.867 S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
14. si:ch211-133l5.5 si:ch211-133l5.5 123 1.759 - - - - - - - 0.897 0.862
15. CABZ01057633.1 CABZ01057633.1 39 1.758 1.000 - - - - 0.758 - - -
16. gngt2b ENSDARG00000103543 132 1.757 - - - - - - - 0.896 0.861 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-091020-4]
17. fam110a ENSDARG00000015293 123 1.754 0.880 0.874 - - - - - - - family with sequence similarity 110, member A [Source:ZFIN;Acc:ZDB-GENE-030521-6]
18. arr3a ENSDARG00000056511, ENSDARG00000114648 192 1.743 - - - - - - - 0.896 0.847 arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]
19. gnb3b ENSDARG00000002696 46 1.741 - - - - - - - 0.897 0.844 guanine nucleotide binding protein (G protein), beta polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2280]
20. slc6a2 ENSDARG00000016141 49 1.734 - - - - - - - 0.897 0.837 solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
21. pcdh1b ENSDARG00000036175 101 1.726 - - - - - 0.875 - 0.851 - protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2]
22. gngt1 ENSDARG00000035798, ENSDARG00000116914 255 1.722 - - - - - - - 0.857 0.865 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7596]
23. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 1.719 - - - - - - - 0.899 0.820 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
24. rlbp1b ENSDARG00000045808, ENSDARG00000109856 282 1.717 - - - - - - - 0.894 0.823 retinaldehyde binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1870]
25. fut9d ENSDARG00000028098 427 1.705 - - - - - - - 0.856 0.849 fucosyltransferase 9d [Source:ZFIN;Acc:ZDB-GENE-050309-15]
26. smap1 ENSDARG00000031302 222 1.689 - 0.876 - - - 0.813 - - - small ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-060920-2]
27. si:ch211-130m23.2 ENSDARG00000095136 121 1.683 - - - - - - - 0.879 0.804 si:ch211-130m23.2 [Source:ZFIN;Acc:ZDB-GENE-060531-13]
28. saga ENSDARG00000012610 63 1.682 - - - - - - - 0.910 0.772 S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
29. ponzr2 ENSDARG00000088539, ENSDARG00000113036 163 1.668 - - - - - 0.773 - 0.895 - plac8 onzin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-050411-41]
30. TULP1 TULP1 50 1.668 - - - - - - - 0.889 0.779
31. dhrs9 ENSDARG00000019260 250 1.663 - - - - - - - 0.875 0.788 dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
32. muc13a ENSDARG00000069559 985 1.662 - - - - - - - 0.890 0.772 mucin 13a, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-061207-26]
33. abcd3b ENSDARG00000002947 220 1.651 - - - - - 0.858 0.793 - - ATP-binding cassette, sub-family D (ALD), member 3b [Source:ZFIN;Acc:ZDB-GENE-050517-29]
34. EPG5 ENSDARG00000059846, ENSDARG00000115218 677 1.647 - - - - - - 0.784 0.863 - ectopic P-granules autophagy protein 5 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-070705-307]
35. nr1d2a ENSDARG00000003820 452 1.645 - - - - - 0.893 - 0.752 - nuclear receptor subfamily 1, group D, member 2a [Source:ZFIN;Acc:ZDB-GENE-040504-1]
36. zgc:123217 ENSDARG00000059026 292 1.639 - - - - - 0.777 - 0.862 - zgc:123217 [Source:ZFIN;Acc:ZDB-GENE-051113-188]
37. phlda3 ENSDARG00000037804 1116 1.639 - - - - - - - 0.857 0.782 pleckstrin homology-like domain, family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-030616-267]
38. ripply1 ENSDARG00000054103 367 1.63 - 0.792 - - - - - 0.838 - ripply transcriptional repressor 1 [Source:ZFIN;Acc:ZDB-GENE-060113-1]
39. pibf1 ENSDARG00000013006, ENSDARG00000015506 151 1.629 - - - - - 0.867 - 0.762 - progesterone immunomodulatory binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-94]
40. stxbp1b ENSDARG00000056036, ENSDARG00000112938 84 1.626 - - - - - - - 0.884 0.742 syntaxin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060531-166]
41. il6r ENSDARG00000104474 150 1.623 - 0.756 - - - 0.867 - - - interleukin 6 receptor [Source:ZFIN;Acc:ZDB-GENE-080107-7]
42. ppp1r3da ENSDARG00000077513 109 1.622 - - - - - - - 0.840 0.782 protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
43. sh3bp5a ENSDARG00000100529 642 1.62 - 0.869 - - - - 0.751 - - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
44. b3gnt3.3 ENSDARG00000093521 430 1.619 - 0.824 - - - - - 0.795 - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081105-12]
45. CDC42EP1_1 CDC42EP1_1 449 1.608 - - - - - 0.789 0.819 - -
46. prdm1b_1 ENSDARG00000098925 140 1.601 - 0.741 - - - 0.860 - - - PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
47. CABZ01063556.1 ENSDARG00000116344 319 1.599 - - - - - 0.708 - 0.891 - L antigen family member 3 [Source:NCBI gene;Acc:100536597]
48. fam92a1 ENSDARG00000004436 658 1.593 - - - - - 0.809 0.784 - - family with sequence similarity 92, member A1 [Source:ZFIN;Acc:ZDB-GENE-040801-123]
49. si:dkey-20i20.2 ENSDARG00000071719 659 1.589 - - - - - - 0.773 - 0.816 si:dkey-20i20.2 [Source:ZFIN;Acc:ZDB-GENE-060503-528]
50. nrp2b ENSDARG00000038446 783 1.588 - - - - - 0.826 - - 0.762 neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
51. slc39a1 ENSDARG00000058257, ENSDARG00000112079 293 1.588 - - - - - 0.736 0.852 - - solute carrier family 39 (zinc transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9917]
52. si:ch211-117m20.5 ENSDARG00000091996 7246 1.587 - - - - - - - 0.856 0.731 si:ch211-117m20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-12]
53. cyp26a1 ENSDARG00000033999 1136 1.587 - - - - - - - 0.752 0.835 cytochrome P450, family 26, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-990415-44]
54. F8A3 F8A3 646 1.574 - - - - - 0.871 - - 0.703
55. CABZ01048956.1 ENSDARG00000117474 253 1.573 - - - - - - - 0.705 0.868 probable GPI-anchored adhesin-like protein PGA18 [Source:NCBI gene;Acc:108191751]
56. MED8 ENSDARG00000114425 459 1.57 - - - - - 0.809 - - 0.761 mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
57. tgm1l4 ENSDARG00000101407 800 1.569 - - - - - - - 0.790 0.779 transglutaminase 1 like 4 [Source:ZFIN;Acc:ZDB-GENE-050913-29]
58. aanat2 ENSDARG00000079802 175 1.567 - - - - - - - 0.796 0.771 arylalkylamine N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-991019-6]
59. has2 ENSDARG00000036987 349 1.561 - - - - - 0.825 0.736 - - hyaluronan synthase 2 [Source:ZFIN;Acc:ZDB-GENE-020828-1]
60. si:ch211-127i16.2 ENSDARG00000092976, ENSDARG00000116049 152 1.558 - - - - - 0.737 - - 0.821 si:ch211-127i16.2 [Source:ZFIN;Acc:ZDB-GENE-091204-54]
61. tcerg1a ENSDARG00000098822 204 1.557 0.812 - - - - 0.745 - - - transcription elongation regulator 1a (CA150) [Source:ZFIN;Acc:ZDB-GENE-030131-1791]
62. zgc:163030 ENSDARG00000069192 2963 1.557 - - - - - - - 0.730 0.827 zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
63. mlec ENSDARG00000059630 2057 1.555 - 0.753 - - - 0.802 - - - malectin [Source:ZFIN;Acc:ZDB-GENE-081105-187]
64. cadps2 ENSDARG00000013312, ENSDARG00000117190 144 1.553 - - - 0.731 - - - - 0.822 Ca++-dependent secretion activator 2 [Source:ZFIN;Acc:ZDB-GENE-030903-1]
65. HHLA2 HHLA2 295 1.552 - 0.772 - - - 0.780 - - -
66. ap1s3b ENSDARG00000027966 1064 1.551 - - - - - - - 0.810 0.741 adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
67. IER2 IER2 604 1.545 - - - - - 0.787 - - 0.758
68. zgc:158846 ENSDARG00000058462, ENSDARG00000113282 161 1.54 - 0.801 - - - 0.739 - - - zgc:158846 [Source:ZFIN;Acc:ZDB-GENE-070209-50]
69. SLC25A6 ENSDARG00000005853, ENSDARG00000113366 975 1.535 - - - - - 0.716 - - 0.819 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-446]
70. jak2a ENSDARG00000104808 1658 1.531 - - - - - 0.783 0.748 - - Janus kinase 2a [Source:ZFIN;Acc:ZDB-GENE-980526-481]
71. exosc2 ENSDARG00000028688 726 1.524 - - - - - - - 0.823 0.701 exosome component 2 [Source:ZFIN;Acc:ZDB-GENE-050417-27]
72. otud3 ENSDARG00000022648 263 1.519 - - - - - - - 0.817 0.702 OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
73. ccsapb ENSDARG00000040085 784 1.517 - - - 0.718 - - 0.799 - - centriole, cilia and spindle-associated protein b [Source:ZFIN;Acc:ZDB-GENE-081107-51]
74. b3gnt3.4 ENSDARG00000058100 117 1.508 0.745 - - - - 0.763 - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-030131-8875]
75. ponzr3 ENSDARG00000088589, ENSDARG00000116407 1373 1.507 - - - - - - - 0.740 0.767 plac8 onzin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-050506-38]
76. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1.504 - - - - 0.720 0.784 - - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
77. C17H10orf137 C17H10orf137 273 1.502 - 0.793 - - - - 0.709 - -
78. caspa ENSDARG00000008165 286 1.5 - - - - - 0.779 0.721 - - caspase a [Source:ZFIN;Acc:ZDB-GENE-000616-3]
79. CCDC64B CCDC64B 337 1.493 - - - - - - - 0.736 0.757
80. ca15a ENSDARG00000015654 2657 1.486 - - - - - 0.761 0.725 - - carbonic anhydrase XVa [Source:ZFIN;Acc:ZDB-GENE-070424-7]
81. ube2w ENSDARG00000044923 438 1.482 - - - - - - 0.748 0.734 - ubiquitin-conjugating enzyme E2W (putative) [Source:ZFIN;Acc:ZDB-GENE-050506-94]
82. si:dkey-169i5.4 ENSDARG00000077862 511 1.476 - - - - - - 0.729 - 0.747 si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
83. hoxd13a ENSDARG00000059256 1190 1.472 - 0.707 - - - 0.765 - - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
84. AL844186.1 ENSDARG00000114351 41 1.472 0.746 - - 0.726 - - - - -
85. ctps1a ENSDARG00000030700 3868 1.463 - - - - - 0.763 0.700 - - CTP synthase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-808]
86. zgc:194887 ENSDARG00000098586 437 1.46 - 0.717 - - - 0.743 - - - zgc:194887 [Source:ZFIN;Acc:ZDB-GENE-081022-162]
87. clip1a ENSDARG00000078722 677 1.452 - - - - - 0.744 0.708 - - CAP-GLY domain containing linker protein 1a [Source:ZFIN;Acc:ZDB-GENE-060526-282]
88. MPRIP ENSDARG00000105209 390 1.45 - - - - - 0.733 0.717 - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
89. zgc:158320 ENSDARG00000099373 161 1.432 - - - 0.714 - 0.718 - - - zgc:158320 [Source:ZFIN;Acc:ZDB-GENE-061201-33]
90. add3b ENSDARG00000056250, ENSDARG00000114699 119 1.432 0.711 0.721 - - - - - - - adducin 3 (gamma) b [Source:ZFIN;Acc:ZDB-GENE-080718-6]
91. crb2b ENSDARG00000060081 144 1.431 - - - - - 0.720 - - 0.711 crumbs family member 2b [Source:ZFIN;Acc:ZDB-GENE-060610-1]
92. cyp2v1 ENSDARG00000018485 694 1.419 - - - - - 0.709 0.710 - - cytochrome P450, family 2, subfamily V, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040912-139]
93. si:rp71-36a1.1 ENSDARG00000095295 13 1 1.000 - - - - - - - - si:rp71-36a1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-407]
94. si:ch211-241e1.5 ENSDARG00000008906 70 1 1.000 - - - - - - - - si:ch211-241e1.5 [Source:ZFIN;Acc:ZDB-GENE-030131-6298]
95. si:ch211-106h4.9 ENSDARG00000075706 36 1 1.000 - - - - - - - - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
96. si:ch73-299h12.9 ENSDARG00000104488 81 1 1.000 - - - - - - - - si:ch73-299h12.9 [Source:ZFIN;Acc:ZDB-GENE-081031-87]
97. tmc4 ENSDARG00000031757 30 1 1.000 - - - - - - - - transmembrane channel-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7489]
98. msgn1 ENSDARG00000070546 188 1 1.000 - - - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
99. U8 U8 11 1 1.000 - - - - - - - -
100. ms4a17a.9 ENSDARG00000094854 933 1 1.000 - - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.9 [Source:ZFIN;Acc:ZDB-GENE-050320-79]

There are 1486 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA