Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for n-R5s200

Gene Name Gene ID Reads Annotation
n-R5s200 ENSMUSG00000077382 42 nuclear encoded rRNA 5S 200 [Source:MGI Symbol;Acc:MGI:4422065]







Genes with expression patterns similar to n-R5s200

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. n-R5s200 ENSMUSG00000077382 42 6 1.000 1.000 1.000 1.000 1.000 1.000 nuclear encoded rRNA 5S 200 [Source:MGI Symbol;Acc:MGI:4422065]
2. Fam46b 25 0.893 0.893 - - - - - family with sequence similarity 46, member B
3. Gm11939 ENSMUSG00000078132 8 0.865 0.865 - - - - - predicted gene 11939 [Source:MGI Symbol;Acc:MGI:3651443]
4. Rxfp1 ENSMUSG00000034009 15 0.862 - - 0.862 - - - relaxin/insulin-like family peptide receptor 1 [Source:MGI Symbol;Acc:MGI:2682211]
5. C030034I22Rik ENSMUSG00000073374 8 0.854 - - - - - 0.854 RIKEN cDNA C030034I22 gene [Source:MGI Symbol;Acc:MGI:1924783]
6. Gm11353 ENSMUSG00000060198 18 0.854 - - - - - 0.854 predicted gene 11353 [Source:MGI Symbol;Acc:MGI:3649794]
7. Rpl35a-ps4 ENSMUSG00000083424 62 0.851 0.851 - - - - - ribosomal protein 35A, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3650995]
8. Gm7258 ENSMUSG00000096557 6 0.842 0.842 - - - - - predicted gene 7258 [Source:MGI Symbol;Acc:MGI:3644893]
9. Gm14471 ENSMUSG00000084892 2 0.842 0.842 - - - - - predicted gene 14471 [Source:MGI Symbol;Acc:MGI:3650368]
10. Gm12630 ENSMUSG00000082969 11 0.842 0.842 - - - - - predicted gene 12630 [Source:MGI Symbol;Acc:MGI:3650968]
11. 4932441J04Rik ENSMUSG00000097216 5 0.842 0.842 - - - - - RIKEN cDNA 4932441J04 gene [Source:MGI Symbol;Acc:MGI:2441691]
12. Nek10 ENSMUSG00000042567 2 0.842 0.842 - - - - - NIMA (never in mitosis gene a)- related kinase 10 [Source:MGI Symbol;Acc:MGI:2685128]
13. Sva ENSMUSG00000023289 2 0.842 0.842 - - - - - seminal vesicle antigen [Source:MGI Symbol;Acc:MGI:102785]
14. Gm11997 ENSMUSG00000084045 2 0.842 0.842 - - - - - predicted gene 11997 [Source:MGI Symbol;Acc:MGI:3650899]
15. A730060N03Rik ENSMUSG00000092375 4 0.842 0.842 - - - - - RIKEN cDNA A730060N03 gene [Source:MGI Symbol;Acc:MGI:2444190]
16. Ptchd3 ENSMUSG00000039198 6 0.842 0.842 - - - - - patched domain containing 3 [Source:MGI Symbol;Acc:MGI:1921925]
17. Gm15705 Gm15705 2 0.842 0.842 - - - - -
18. Olfr466 ENSMUSG00000049806 2 0.842 0.842 - - - - - olfactory receptor 466 [Source:MGI Symbol;Acc:MGI:3030300]
19. Gm20945 ENSMUSG00000094534 2 0.842 0.842 - - - - - predicted gene, 20945 [Source:MGI Symbol;Acc:MGI:5434300]
20. Recql5os1 ENSMUSG00000087072 3 0.842 0.842 - - - - - RecQ-like 5, opposite strand 1 [Source:MGI Symbol;Acc:MGI:3650983]
21. Has3 ENSMUSG00000031910 10 0.842 0.842 - - - - - hyaluronan synthase 3 [Source:MGI Symbol;Acc:MGI:109599]
22. Clec2i ENSMUSG00000030365 10 0.842 0.842 - - - - - C-type lectin domain family 2, member i [Source:MGI Symbol;Acc:MGI:2136650]
23. Olfr697 ENSMUSG00000051591 2 0.842 0.842 - - - - - olfactory receptor 697 [Source:MGI Symbol;Acc:MGI:3030531]
24. Trpv6 ENSMUSG00000029868 3 0.842 0.842 - - - - - transient receptor potential cation channel, subfamily V, member 6 [Source:MGI Symbol;Acc:MGI:1927259]
25. Gm14164 ENSMUSG00000068062 2 0.842 0.842 - - - - - predicted gene 14164 [Source:MGI Symbol;Acc:MGI:3650730]
26. Cyp3a25 ENSMUSG00000029630 2 0.842 0.842 - - - - - cytochrome P450, family 3, subfamily a, polypeptide 25 [Source:MGI Symbol;Acc:MGI:1930638]
27. Gm26516 ENSMUSG00000097158 10 0.842 0.842 - - - - - predicted gene, 26516 [Source:MGI Symbol;Acc:MGI:5477010]
28. Gm25012 ENSMUSG00000089021 2 0.842 0.842 - - - - - predicted gene, 25012 [Source:MGI Symbol;Acc:MGI:5454789]
29. Gm12882 ENSMUSG00000081423 2 0.842 0.842 - - - - - predicted gene 12882 [Source:MGI Symbol;Acc:MGI:3651897]
30. Gm14785 ENSMUSG00000083955 2 0.842 0.842 - - - - - predicted gene 14785 [Source:MGI Symbol;Acc:MGI:3705759]
31. Zkscan7 ENSMUSG00000063488, ENSMUSG00000111063 2 0.842 0.842 - - - - - zinc finger with KRAB and SCAN domains 7 [Source:MGI Symbol;Acc:MGI:3040678]
32. Fmo1 ENSMUSG00000040181 39 0.842 0.842 - - - - - flavin containing monooxygenase 1 [Source:MGI Symbol;Acc:MGI:1310002]
33. Gm13426 ENSMUSG00000084226 2 0.842 0.842 - - - - - predicted gene 13426 [Source:MGI Symbol;Acc:MGI:3652100]
34. Gm9924 ENSMUSG00000104299 3 0.842 0.842 - - - - - predicted gene 9924 [Source:MGI Symbol;Acc:MGI:3642216]
35. AI747448 AI747448 2 0.842 0.842 - - - - -
36. Lypd3 ENSMUSG00000057454 6 0.842 0.842 - - - - - Ly6/Plaur domain containing 3 [Source:MGI Symbol;Acc:MGI:1919684]
37. Fmr1nb ENSMUSG00000062170 7 0.842 0.842 - - - - - Fmr1 neighbor [Source:MGI Symbol;Acc:MGI:2672032]
38. Oxt ENSMUSG00000027301 5 0.842 0.842 - - - - - oxytocin [Source:MGI Symbol;Acc:MGI:97453]
39. A630095E13Rik ENSMUSG00000070313 6 0.842 0.842 - - - - - RIKEN cDNA A630095E13 gene [Source:MGI Symbol;Acc:MGI:3055869]
40. Has2os ENSMUSG00000086541 9 0.842 0.842 - - - - - hyaluronan synthase 2, opposite strand [Source:MGI Symbol;Acc:MGI:3643465]
41. Uba1y ENSMUSG00000069053 4 0.842 0.842 - - - - - ubiquitin-activating enzyme, Chr Y [Source:MGI Symbol;Acc:MGI:98891]
42. Mmp8 ENSMUSG00000005800 22 0.829 0.829 - - - - - matrix metallopeptidase 8 [Source:MGI Symbol;Acc:MGI:1202395]
43. Aloxe3 ENSMUSG00000020892 11 0.827 0.827 - - - - - arachidonate lipoxygenase 3 [Source:MGI Symbol;Acc:MGI:1345140]
44. Endog ENSMUSG00000015337 8 0.827 0.827 - - - - - endonuclease G [Source:MGI Symbol;Acc:MGI:1261433]
45. Gdf3 ENSMUSG00000030117 21 0.82 0.820 - - - - - growth differentiation factor 3 [Source:MGI Symbol;Acc:MGI:95686]
46. A130066N16Rik A130066N16Rik 5 0.82 0.820 - - - - -
47. Syngr4 ENSMUSG00000040231 19 0.819 0.819 - - - - - synaptogyrin 4 [Source:MGI Symbol;Acc:MGI:1928903]
48. Slfn3 ENSMUSG00000018986, ENSMUSG00000115941, ENSMUSG00000116018, ENSMUSG00000116431 4 0.801 0.801 - - - - - schlafen 3 [Source:MGI Symbol;Acc:MGI:1329005]
49. Gm26625 ENSMUSG00000097138 4 0.801 0.801 - - - - - predicted gene, 26625 [Source:MGI Symbol;Acc:MGI:5477119]
50. Chmp4c ENSMUSG00000027536 14 0.8 - - 0.800 - - - charged multivesicular body protein 4C [Source:MGI Symbol;Acc:MGI:1913621]
51. 2210408F21Rik ENSMUSG00000087380 1 0.8 - - 0.800 - - - RIKEN cDNA 2210408F21 gene [Source:MGI Symbol;Acc:MGI:1920902]
52. Gm3558 ENSMUSG00000079364 14 0.8 - - 0.800 - - - predicted gene 3558 [Source:MGI Symbol;Acc:MGI:3781735]
53. Gm13608 ENSMUSG00000081480 4 0.797 0.797 - - - - - predicted gene 13608 [Source:MGI Symbol;Acc:MGI:3651499]
54. Prss43 ENSMUSG00000058398 18 0.794 0.794 - - - - - protease, serine 43 [Source:MGI Symbol;Acc:MGI:2684822]
55. Gm7290 ENSMUSG00000078192 8 0.791 0.791 - - - - - predicted pseudogene 7290 [Source:MGI Symbol;Acc:MGI:3646633]
56. Wbscr25 ENSMUSG00000054909 10 0.791 0.791 - - - - - Williams Beuren syndrome chromosome region 25 (human) [Source:MGI Symbol;Acc:MGI:1918554]
57. Mfap5 ENSMUSG00000030116 35 0.791 0.791 - - - - - microfibrillar associated protein 5 [Source:MGI Symbol;Acc:MGI:1354387]
58. Gm26617 ENSMUSG00000097340 62 0.784 0.784 - - - - - predicted gene, 26617 [Source:MGI Symbol;Acc:MGI:5477111]
59. Gm26877 ENSMUSG00000097373 35 0.783 - - - - - 0.783 predicted gene, 26877 [Source:MGI Symbol;Acc:MGI:5477371]
60. 4930539J05Rik ENSMUSG00000097032 11 0.783 0.783 - - - - - RIKEN cDNA 4930539J05 gene [Source:MGI Symbol;Acc:MGI:1922477]
61. Itih2 ENSMUSG00000037254 468 0.782 - - - - - 0.782 inter-alpha trypsin inhibitor, heavy chain 2 [Source:MGI Symbol;Acc:MGI:96619]
62. Odf3b ENSMUSG00000047394 4 0.782 - - - - - 0.782 outer dense fiber of sperm tails 3B [Source:MGI Symbol;Acc:MGI:1917363]
63. Gm16244 ENSMUSG00000090235 77 0.78 0.780 - - - - - predicted gene 16244 [Source:MGI Symbol;Acc:MGI:3802128]
64. Ptgfr ENSMUSG00000028036 25 0.777 0.777 - - - - - prostaglandin F receptor [Source:MGI Symbol;Acc:MGI:97796]
65. Tmem171 ENSMUSG00000052485 17 0.776 - - 0.776 - - - transmembrane protein 171 [Source:MGI Symbol;Acc:MGI:2685751]
66. Ceacam2 ENSMUSG00000054385 8 0.774 0.774 - - - - - carcinoembryonic antigen-related cell adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:1347246]
67. Oas3 ENSMUSG00000032661 11 0.774 0.774 - - - - - 2'-5' oligoadenylate synthetase 3 [Source:MGI Symbol;Acc:MGI:2180850]
68. Gnmt ENSMUSG00000002769 57 0.772 0.772 - - - - - glycine N-methyltransferase [Source:MGI Symbol;Acc:MGI:1202304]
69. Cdcp1 ENSMUSG00000035498 66 0.767 - - 0.767 - - - CUB domain containing protein 1 [Source:MGI Symbol;Acc:MGI:2442010]
70. 6030498E09Rik ENSMUSG00000051361 8 0.761 - - 0.761 - - - RIKEN cDNA 6030498E09 gene [Source:MGI Symbol;Acc:MGI:1925133]
71. Gm13604 ENSMUSG00000083910 10 0.76 0.760 - - - - - predicted gene 13604 [Source:MGI Symbol;Acc:MGI:3652203]
72. 2410080I02Rik ENSMUSG00000044387 3 0.759 - - 0.759 - - - RIKEN cDNA 2410080I02 gene [Source:MGI Symbol;Acc:MGI:1915498]
73. Gm20382 ENSMUSG00000111851 9 0.757 0.757 - - - - -
74. Gm8444 ENSMUSG00000069439 12 0.754 - - 0.754 - - - predicted gene 8444 [Source:MGI Symbol;Acc:MGI:3645809]
75. Gm12918 ENSMUSG00000066315 4 0.75 - - 0.750 - - - predicted gene 12918 [Source:MGI Symbol;Acc:MGI:3652005]
76. Gapdhs ENSMUSG00000061099 3 0.75 - - 0.750 - - - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:MGI Symbol;Acc:MGI:95653]
77. Acpp ENSMUSG00000032561 7 0.747 - - - 0.747 - - acid phosphatase, prostate [Source:MGI Symbol;Acc:MGI:1928480]
78. Gm10241 ENSMUSG00000084838 15 0.747 0.747 - - - - - predicted pseudogene 10241 [Source:MGI Symbol;Acc:MGI:3704461]
79. Gm9169 ENSMUSG00000098198 18 0.747 0.747 - - - - - predicted gene 9169 [Source:MGI Symbol;Acc:MGI:3648561]
80. Neurod2 ENSMUSG00000038255 13 0.747 0.747 - - - - - neurogenic differentiation 2 [Source:MGI Symbol;Acc:MGI:107755]
81. Amn ENSMUSG00000021278 9 0.744 - - 0.744 - - - amnionless [Source:MGI Symbol;Acc:MGI:1934943]
82. Tmem74b ENSMUSG00000044364 21 0.742 0.742 - - - - - transmembrane protein 74B [Source:MGI Symbol;Acc:MGI:1918629]
83. Gm13998 ENSMUSG00000081056 13 0.742 0.742 - - - - - predicted gene 13998 [Source:MGI Symbol;Acc:MGI:3651215]
84. Treml1 ENSMUSG00000023993, ENSMUSG00000116425 44 0.74 0.740 - - - - - triggering receptor expressed on myeloid cells-like 1 [Source:MGI Symbol;Acc:MGI:1918576]
85. 5830472F04Rik 5830472F04Rik 31 0.738 - - 0.738 - - -
86. Esyt3 ENSMUSG00000037681 27 0.737 0.737 - - - - - extended synaptotagmin-like protein 3 [Source:MGI Symbol;Acc:MGI:1098699]
87. Adra1b ENSMUSG00000050541 20 0.736 - - - - 0.736 - adrenergic receptor, alpha 1b [Source:MGI Symbol;Acc:MGI:104774]
88. Ptpn22 ENSMUSG00000027843 17 0.735 0.735 - - - - - protein tyrosine phosphatase, non-receptor type 22 (lymphoid) [Source:MGI Symbol;Acc:MGI:107170]
89. Gm6169 ENSMUSG00000057762 16 0.735 0.735 - - - - - predicted gene 6169 [Source:MGI Symbol;Acc:MGI:3646298]
90. Gm23037 ENSMUSG00000065808 7 0.735 0.735 - - - - - predicted gene, 23037 [Source:MGI Symbol;Acc:MGI:5452814]
91. Gm17060 ENSMUSG00000090624 1 0.733 - - 0.733 - - - predicted gene 17060 [Source:MGI Symbol;Acc:MGI:4937887]
92. Slc2a8 ENSMUSG00000026791 119 0.733 0.733 - - - - - solute carrier family 2, (facilitated glucose transporter), member 8 [Source:MGI Symbol;Acc:MGI:1860103]
93. Vwa5b2 ENSMUSG00000046613 39 0.731 0.731 - - - - - von Willebrand factor A domain containing 5B2 [Source:MGI Symbol;Acc:MGI:2681859]
94. Nr1d1 ENSMUSG00000020889 66 0.731 0.731 - - - - - nuclear receptor subfamily 1, group D, member 1 [Source:MGI Symbol;Acc:MGI:2444210]
95. Isoc2a ENSMUSG00000086784 36 0.728 0.728 - - - - - isochorismatase domain containing 2a [Source:MGI Symbol;Acc:MGI:3609243]
96. Gm23921 ENSMUSG00000092999 18 0.726 0.726 - - - - - predicted gene, 23921 [Source:MGI Symbol;Acc:MGI:5453698]
97. Gm13577 ENSMUSG00000082127 5 0.725 - - 0.725 - - - predicted gene 13577 [Source:MGI Symbol;Acc:MGI:3649301]
98. Cngb3 ENSMUSG00000056494 7 0.721 - - 0.721 - - - cyclic nucleotide gated channel beta 3 [Source:MGI Symbol;Acc:MGI:1353562]
99. Dlx4 ENSMUSG00000020871 10 0.72 0.720 - - - - - distal-less homeobox 4 [Source:MGI Symbol;Acc:MGI:94904]
100. Jakmip3 ENSMUSG00000056856, ENSMUSG00000111614 37 0.718 - 0.718 - - - - janus kinase and microtubule interacting protein 3 [Source:MGI Symbol;Acc:MGI:1921254]

There are 74 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA