Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for myod1

Gene Name Gene ID Reads Annotation
myod1 ENSDARG00000030110 6019 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]










Genes with expression patterns similar to myod1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. myod1 ENSDARG00000030110 6019 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
2. PTPLA PTPLA 4044 4.405 0.884 0.874 - - - 0.875 0.960 - 0.812
3. nexn ENSDARG00000057317 10972 4.369 0.891 - - - 0.741 0.930 0.943 - 0.864 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
4. klhl41b ENSDARG00000006757 10762 4.315 0.882 - - 0.711 - 0.895 0.967 - 0.860 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
5. chrna1 ENSDARG00000009021 2931 4.302 0.895 0.840 - - - 0.911 0.936 - 0.720 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
6. txlnbb ENSDARG00000076241 6396 4.282 0.862 0.910 - - - 0.779 0.959 - 0.772 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
7. trdn ENSDARG00000041779 4283 4.267 0.864 0.937 - - - 0.771 0.922 - 0.773 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
8. sh3bgr ENSDARG00000021633 3498 4.213 0.845 0.884 - - - 0.786 0.954 - 0.744 SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
9. ITGB1BP2 ENSDARG00000030176 2472 4.207 0.805 0.814 - - - 0.902 0.915 - 0.771 integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
10. fitm1 ENSDARG00000056464 1759 4.201 0.898 0.869 - - - 0.762 0.945 - 0.727 fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
11. sptb ENSDARG00000030490 7128 4.194 0.796 0.903 - - - 0.760 0.947 - 0.788 spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
12. xirp2a ENSDARG00000071113 7113 4.163 0.894 0.839 - - - 0.721 0.938 - 0.771 xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
13. PTGES3L PTGES3L 4801 4.148 0.890 - - - 0.746 0.798 0.938 - 0.776
14. ryr3 ENSDARG00000071331 6795 4.141 0.773 0.889 - - - 0.801 0.935 - 0.743 ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
15. tnnt2d ENSDARG00000002988 7590 4.141 0.820 0.804 - - - 0.767 0.880 - 0.870 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
16. klhl40a ENSDARG00000039052 2537 4.127 0.840 0.841 - - - 0.806 0.939 - 0.701 kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
17. cap2 ENSDARG00000104478 3266 4.125 0.830 0.792 - - - 0.745 0.960 - 0.798 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
18. CR847973.1 ENSDARG00000115516 8754 4.1 0.835 0.775 - - - 0.865 0.891 - 0.734
19. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 4.059 0.771 0.720 - - - 0.902 0.907 - 0.759 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
20. TENC1 TENC1 1729 4.014 0.778 0.841 - - - 0.786 0.878 - 0.731
21. znf648 ENSDARG00000104823 1918 4.003 0.746 0.850 - - - 0.792 0.908 - 0.707 zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
22. vwde ENSDARG00000103443 5758 3.969 0.839 0.801 - - 0.725 0.727 0.877 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
23. txnipb ENSDARG00000070000 2365 3.853 0.757 0.758 - - - 0.764 0.863 - 0.711 thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
24. NRAP ENSDARG00000009341 3565 3.569 0.869 0.850 - - - 0.907 0.943 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
25. zgc:92518 ENSDARG00000016343 3837 3.501 0.854 - - - - 0.883 0.982 - 0.782 zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
26. smtnl1 ENSDARG00000041257 7410 3.492 0.867 - - - - 0.918 0.938 - 0.769 smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
27. C13H10orf71 3489 3.489 0.875 0.888 - - - - 0.915 - 0.811 chromosome 13 C10orf71 homolog
28. stac3 ENSDARG00000098883 1765 3.488 0.789 0.851 - - - 0.932 0.916 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
29. rp42-pen rp42-pen 3395 3.469 - 0.878 - - - 0.849 0.944 - 0.798
30. znf106a ENSDARG00000016651 6049 3.467 0.801 0.809 - - - - 0.971 - 0.886 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
31. limch1a ENSDARG00000074275 2981 3.46 0.837 0.827 - - - - 0.924 0.872 - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
32. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.457 0.839 0.877 - - - 0.794 0.947 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
33. gypc ENSDARG00000041546 1487 3.451 0.832 0.835 - - - 0.867 0.917 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
34. tgm2a ENSDARG00000070157 4516 3.437 0.864 - - - - 0.922 0.934 - 0.717 transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
35. mybpc2b ENSDARG00000021265 9618 3.429 0.935 0.887 - - - - 0.887 - 0.720 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
36. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 3.427 0.788 0.893 - - - - 0.970 - 0.776 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
37. BX294434.1 ENSDARG00000061272 6493 3.423 0.819 0.881 - - - - 0.956 - 0.767 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
38. AIMP1 ENSDARG00000060036 4136 3.422 0.820 0.965 - - - 0.885 - - 0.752 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
39. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 3.412 0.880 - - - - 0.821 0.941 - 0.770 fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
40. smyd2b ENSDARG00000005629 8181 3.409 0.795 0.893 - - - 0.912 - - 0.809 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
41. FHOD3_1 FHOD3_1 983 3.402 0.861 0.817 - - - 0.829 0.895 - -
42. MYOT ENSDARG00000076312 1791 3.398 0.869 0.775 - - - 0.813 0.941 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
43. TRIM63 TRIM63 1600 3.398 0.725 0.840 - - - 0.889 0.944 - -
44. prx ENSDARG00000017246 6183 3.39 0.767 0.838 - - - - 0.965 - 0.820 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
45. cacng1 cacng1 3118 3.388 0.834 0.858 - - - 0.814 0.882 - -
46. jph1a ENSDARG00000058603 2852 3.382 - 0.883 - - - 0.784 0.957 - 0.758 junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
47. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 3.375 0.865 0.840 - - - 0.799 0.871 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
48. zgc:158296 ENSDARG00000070923 3935 3.374 - 0.824 - - - 0.805 0.959 - 0.786 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
49. jph2 ENSDARG00000028625 6706 3.353 0.782 - - - - 0.818 0.963 - 0.790 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
50. hhatla ENSDARG00000039051 6598 3.335 0.749 0.892 - - - - 0.945 - 0.749 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
51. mafa ENSDARG00000015890 2140 3.327 0.776 - - - - 0.859 0.927 - 0.765 v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
52. usp28 ENSDARG00000008880 1850 3.327 0.817 0.849 - - - - 0.926 - 0.735 ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
53. BX530018.3 ENSDARG00000107022 614 3.322 0.865 0.819 - - - - 0.926 - 0.712
54. casq1b ENSDARG00000018105 2643 3.315 0.759 0.835 - - - - 0.952 - 0.769 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
55. cmya5 ENSDARG00000061379 1423 3.304 0.743 0.782 - - - 0.847 0.932 - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
56. ppapdc3 ppapdc3 4924 3.291 0.788 - - - - 0.860 0.936 - 0.707
57. ntmt1 ENSDARG00000022399 5779 3.284 0.776 0.884 - - - 0.707 0.917 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
58. trim55a ENSDARG00000029596 2858 3.283 0.768 0.875 - - - - 0.935 - 0.705 tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
59. zgc:92113 1738 3.283 0.767 - - - - 0.848 0.932 - 0.736 zgc:92113
60. chrnd ENSDARG00000019342 2728 3.274 0.701 0.873 - - - - 0.922 - 0.778 cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
61. tnnt3a ENSDARG00000030270 112506 3.273 0.889 - - - - 0.732 0.805 - 0.847 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
62. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 3.268 0.769 0.844 - - - 0.896 - - 0.759 calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
63. CR392006.1 CR392006.1 1401 3.267 0.720 0.885 - - - 0.791 0.871 - -
64. usp2a ENSDARG00000020107 2586 3.264 0.841 - - - - 0.765 0.940 - 0.718 ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
65. tnnc1b ENSDARG00000037539 13945 3.26 - 0.865 - - - 0.786 0.892 - 0.717 troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
66. ATP5J_2 ATP5J_2 2381 3.231 0.767 0.720 - - - 0.848 0.896 - -
67. si:ch211-242b18.1 ENSDARG00000054723 2929 3.225 0.780 0.865 - - - 0.740 0.840 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
68. tmem47 ENSDARG00000057322 4691 3.211 0.701 0.808 - - - 0.816 0.886 - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
69. sucla2 ENSDARG00000005359 5992 3.208 0.822 0.777 - - - 0.841 - - 0.768 succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
70. hfe2 4113 3.207 0.913 0.795 - - 0.782 0.717 - - - hemochromatosis type 2
71. PTP4A3 ENSDARG00000039997 3814 3.201 0.824 0.737 - - - 0.834 0.806 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
72. mir133b_1 671 3.199 0.796 0.850 - - - 0.712 0.841 - - microRNA 133b
73. ptrfa ptrfa 4363 3.196 0.811 0.818 - - - 0.832 - - 0.735
74. tgm1l1 ENSDARG00000102106 1437 3.175 0.754 0.910 - - - 0.771 0.740 - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
75. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 3.172 0.757 0.812 - - - 0.744 0.859 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
76. MUSTN1 MUSTN1 1882 3.169 0.705 0.840 - - - 0.709 0.915 - -
77. mtdhb ENSDARG00000004939 1225 3.165 0.841 0.740 - - - 0.811 0.773 - - metadherin b [Source:ZFIN;Acc:ZDB-GENE-090929-2]
78. smpx ENSDARG00000045302 2175 3.164 0.707 - - - - 0.842 0.905 - 0.710 small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
79. MYOM3 2720 3.16 0.827 0.738 - - - 0.748 0.847 - - myomesin 3, transcript variant X2
80. DUSP27 ENSDARG00000099889 1197 3.14 0.867 0.819 - - - 0.746 0.708 - - dual specificity phosphatase 27 [Source:ZFIN;Acc:ZDB-GENE-140513-1]
81. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 3.138 0.740 0.742 - - - 0.864 0.792 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
82. MYOM1 MYOM1 3870 3.133 0.705 0.760 - - - - 0.940 - 0.728
83. myoz2b ENSDARG00000037266 2139 3.126 0.761 0.784 - - - 0.720 0.861 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
84. txn2 ENSDARG00000034777 4071 3.069 0.715 0.761 - - - - 0.859 - 0.734 thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
85. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 3.034 0.710 - - - - 0.762 0.761 0.801 - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
86. mcamb ENSDARG00000005368 1660 2.952 0.710 0.790 - - - 0.708 0.744 - - melanoma cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030219-213]
87. TMPO TMPO 3264 2.74 0.921 0.853 - - - - 0.966 - -
88. srl ENSDARG00000104587 11126 2.729 0.839 0.937 - - - - 0.953 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
89. si:ch211-156j16.1 ENSDARG00000092035 7441 2.724 0.931 - - - - - 0.978 - 0.815 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
90. pygma ENSDARG00000055518 15972 2.715 0.893 0.884 - - - - 0.938 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
91. CR354540.2 ENSDARG00000117517 18452 2.683 0.929 - - - - - 0.943 - 0.811
92. sgcd ENSDARG00000098573 4980 2.682 0.914 - - - - - 0.965 - 0.803 sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
93. hapln1a ENSDARG00000089769 12334 2.682 0.892 0.847 - - - - 0.943 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
94. flncb ENSDARG00000018820 5595 2.658 0.893 - - - - 0.827 0.938 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
95. smyd1b ENSDARG00000091253 4964 2.644 0.907 0.940 - - - 0.797 - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
96. myom1a ENSDARG00000061249 10230 2.644 - - - - - 0.937 0.978 - 0.729 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
97. SYNPO2L SYNPO2L 6697 2.639 0.897 - - - - 0.932 - - 0.810
98. si:ch211-114n24.7 si:ch211-114n24.7 2544 2.638 0.805 0.895 - - - - 0.938 - -
99. pbxip1a ENSDARG00000071015 4960 2.635 0.815 0.883 - - - - 0.937 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
100. atp1b3b ENSDARG00000042837 5163 2.621 0.800 - - - - 0.924 0.897 - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]

There are 1733 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA