Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for myo1b

Gene Name Gene ID Reads Annotation
myo1b ENSDARG00000024694 1761 myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]










Genes with expression patterns similar to myo1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. myo1b ENSDARG00000024694 1761 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
2. gtf2a1 ENSDARG00000011000 2026 3.07 - 0.731 0.919 - - 0.704 0.716 - - general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]
3. nxf1 ENSDARG00000055076 3251 2.627 - - 0.954 - - 0.855 0.818 - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
4. trpc4apb ENSDARG00000020647 670 2.482 - 0.733 0.989 - - 0.760 - - - transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
5. cops4 ENSDARG00000043732 1508 2.463 - 0.763 0.963 - - - 0.737 - - COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-030131-4317]
6. znf207a ENSDARG00000015538 2630 2.404 - - 0.963 - - - 0.713 - 0.728 zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
7. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.376 - - 0.856 - - 0.779 0.741 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
8. pomp ENSDARG00000032296 4439 2.351 - - 0.861 - - - 0.767 - 0.723 proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
9. cenpk ENSDARG00000039616 744 2.344 - - - - - 0.776 0.729 - 0.839 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
10. si:ch211-113e8.10 ENSDARG00000079631 498 2.3 - - - 0.701 - 0.765 - - 0.834 si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
11. syncripl ENSDARG00000026723 3889 2.29 - - 0.783 - - - 0.701 - 0.806 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
12. pum1 ENSDARG00000099256 5017 2.192 - 0.717 - - - 0.773 0.702 - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
13. CCDC88C ENSDARG00000053713 1026 1.845 - - 0.981 - - - - - 0.864 coiled-coil domain containing 88C [Source:ZFIN;Acc:ZDB-GENE-100419-3]
14. nsun2 ENSDARG00000056665 740 1.83 - - 0.991 - - - - - 0.839 NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
15. prr12a ENSDARG00000074229 1668 1.823 - - 0.974 - - - - - 0.849 proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
16. ints8 ENSDARG00000057986 1063 1.814 - - 0.979 - - - - - 0.835 integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
17. eif2b2 ENSDARG00000041397, ENSDARG00000114220 2348 1.809 - - 0.958 - - - - - 0.851 eukaryotic translation initiation factor 2B, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-040426-2605]
18. aqr ENSDARG00000016775 1581 1.809 - - 0.984 - - - - - 0.825 aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
19. tm9sf4 ENSDARG00000002536 1684 1.796 - - 0.984 - - - - - 0.812 transmembrane 9 superfamily protein member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1575]
20. ubtf ENSDARG00000035066 4070 1.794 - - 0.941 - - 0.853 - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
21. sh3rf1 ENSDARG00000070470 1463 1.793 - - 0.989 - - - 0.804 - - SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
22. rfc1 ENSDARG00000054799 1416 1.788 - - 0.970 - - - 0.818 - - replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]
23. TCAIM ENSDARG00000079881 424 1.786 - - 0.992 - - 0.794 - - - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
24. gpatch2 1221 1.776 - - 0.989 - - 0.787 - - - G patch domain containing 2, transcript variant X1
25. syt11a ENSDARG00000057913 1145 1.775 - - 0.991 - - 0.784 - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
26. tmem222a ENSDARG00000069589 1766 1.771 - - 0.990 - - 0.781 - - - transmembrane protein 222a [Source:ZFIN;Acc:ZDB-GENE-050306-17]
27. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.768 - - 0.927 - - 0.841 - - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
28. atoh1b ENSDARG00000099564 494 1.762 - - 0.978 - - 0.784 - - - atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]
29. WDFY3 ENSDARG00000078890 2092 1.76 - - 0.965 - - 0.795 - - - WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
30. ercc2 ENSDARG00000021985 678 1.758 - - 0.992 - - 0.766 - - - excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
31. bag6 ENSDARG00000075892 3782 1.755 - - 0.950 - - - - - 0.805 BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
32. tubgcp2 ENSDARG00000013079 1520 1.754 - - 0.988 - - 0.766 - - - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
33. srsf1b ENSDARG00000017843 2760 1.749 - - 0.966 - - 0.783 - - - serine/arginine-rich splicing factor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1467]
34. zc3h13 ENSDARG00000037177, ENSDARG00000113331 2662 1.747 - - 0.951 - - - - - 0.796 zinc finger CCCH-type containing 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1619]
35. nin ENSDARG00000060298 1558 1.742 - - 0.987 - - 0.755 - - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
36. gak ENSDARG00000090654 695 1.741 - - 0.985 - - 0.756 - - - cyclin G associated kinase [Source:ZFIN;Acc:ZDB-GENE-041210-358]
37. elmod2 ENSDARG00000101669 3101 1.735 - 0.778 0.957 - - - - - - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
38. zbtb18 ENSDARG00000028228 3653 1.735 - - 0.987 - - 0.748 - - - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
39. si:dkey-19e4.5 ENSDARG00000089886 2562 1.734 - - 0.966 - - - - - 0.768 si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
40. zgc:112982 ENSDARG00000001829, ENSDARG00000110590, ENSDARG00000111057 2330 1.73 - 0.750 0.980 - - - - - - zgc:112982 [Source:ZFIN;Acc:ZDB-GENE-050306-55]
41. mrpl11 ENSDARG00000013075 2927 1.729 - - 0.974 - - - 0.755 - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
42. mapk12b ENSDARG00000006409 2246 1.725 - - 0.922 - - 0.803 - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
43. emc3 ENSDARG00000020607 3406 1.724 - - 0.970 - - - - - 0.754 ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
44. tmem30ab ENSDARG00000043555 1344 1.711 - 0.728 0.983 - - - - - - transmembrane protein 30Ab [Source:ZFIN;Acc:ZDB-GENE-030131-5884]
45. pes ENSDARG00000018902 3286 1.706 - - 0.895 - - - - - 0.811 pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
46. creg2 ENSDARG00000000666 643 1.705 - - - 0.877 - - - - 0.828 cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
47. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 1.701 - - 0.993 - - - 0.708 - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
48. znf598 ENSDARG00000014945 1838 1.7 - 0.722 0.978 - - - - - - zinc finger protein 598 [Source:ZFIN;Acc:ZDB-GENE-060602-3]
49. polr2j ENSDARG00000035146 1493 1.696 - - 0.976 - - 0.720 - - - polymerase (RNA) II (DNA directed) polypeptide J [Source:ZFIN;Acc:ZDB-GENE-050522-120]
50. vangl2 ENSDARG00000027397 2418 1.693 - - 0.965 - - 0.728 - - - VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
51. daxx ENSDARG00000000729 734 1.691 - - - - - 0.859 - - 0.832 death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
52. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.689 - - 0.988 0.701 - - - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
53. ncalda ENSDARG00000070688 5069 1.688 - - 0.948 - - - - - 0.740 neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
54. zmat2 ENSDARG00000004956 1676 1.682 - - 0.981 - - 0.701 - - - zinc finger, matrin-type 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3197]
55. setd8b 2528 1.68 - - 0.959 0.721 - - - - - SET domain containing (lysine methyltransferase) 8b
56. kifc1 ENSDARG00000001558 6658 1.674 - - - - - - 0.789 - 0.885 kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
57. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.674 - - - - - - 0.817 - 0.857 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
58. sf3a3 ENSDARG00000100114 4511 1.671 - - 0.929 - - - 0.742 - - splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
59. nadl1.2 695 1.662 - - - - - 0.832 - - 0.830 neural adhesion molecule L1.2, transcript variant X1
60. MAN2A2 ENSDARG00000063101 922 1.648 - - - - - 0.786 - - 0.862 mannosidase, alpha, class 2A, member 2 [Source:ZFIN;Acc:ZDB-GENE-110331-1]
61. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.648 - - 0.905 - - - 0.743 - - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
62. kif18a ENSDARG00000008022 546 1.646 - - - - - 0.813 - - 0.833 kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
63. caly ENSDARG00000036008 1002 1.644 - - - - - 0.801 - - 0.843 calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
64. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.644 - - - - - 0.836 - - 0.808 protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
65. st8sia2 ENSDARG00000018788 2183 1.644 - - - - - 0.773 - - 0.871 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
66. pabpn1 ENSDARG00000045373 4876 1.643 - - - - - - 0.764 - 0.879 poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
67. ctbp2 ctbp2 3255 1.643 - 0.790 - - - 0.853 - - -
68. palm1b ENSDARG00000007818 2128 1.641 - - - - - 0.809 - - 0.832 paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
69. eps15l1a ENSDARG00000042670 1565 1.64 - - - 0.809 - - - - 0.831 epidermal growth factor receptor pathway substrate 15-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-274]
70. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.639 - - 0.810 - - - 0.829 - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
71. fscn1a ENSDARG00000059680 3999 1.639 - - - - - 0.756 0.883 - - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
72. ppm1da ENSDARG00000009273 7713 1.632 - - 0.890 - - - - - 0.742 protein phosphatase, Mg2+/Mn2+ dependent, 1Da [Source:ZFIN;Acc:ZDB-GENE-040426-815]
73. txnl4a ENSDARG00000036190 2048 1.631 - - - - - - 0.779 - 0.852 thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
74. ube2nb ENSDARG00000045877 4583 1.626 - - 0.873 - - 0.753 - - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
75. zgc:173548 ENSDARG00000070048 558 1.625 - 0.794 - - - - - - 0.831 zgc:173548 [Source:ZFIN;Acc:ZDB-GENE-070928-39]
76. si:ch211-133l11.10 ENSDARG00000005626 381 1.617 - - - - - 0.803 - - 0.814 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
77. prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 1.615 - - 0.890 - - - 0.725 - - peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
78. st8sia5 ENSDARG00000036584 529 1.614 - - - - - 0.770 - - 0.844 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
79. cwc25 ENSDARG00000003382 2134 1.613 - - - - - 0.743 - - 0.870 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
80. zgc:109949 ENSDARG00000103413 426 1.612 - - - - - 0.793 - - 0.819 zgc:109949 [Source:ZFIN;Acc:ZDB-GENE-050522-166]
81. phc2b_1 ENSDARG00000013224 1316 1.612 - - - - - 0.759 - - 0.853 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
82. atpv0e2 ENSDARG00000059057 585 1.611 - - - 0.806 - 0.805 - - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
83. abi2b ENSDARG00000014875 2259 1.61 - - - - - 0.763 - - 0.847 abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
84. mafg2 mafg2 1041 1.61 - - - - - 0.767 - - 0.843
85. pspc1 ENSDARG00000006621 966 1.607 - - - - - 0.780 - - 0.827 paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
86. cldn5a ENSDARG00000043716 3865 1.607 - - 0.861 - - 0.746 - - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
87. SENP2 ENSDARG00000073837 1411 1.607 - - - - - 0.819 0.788 - - SUMO specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-060810-183]
88. C21H18orf25 C21H18orf25 800 1.606 - - - - - 0.773 - - 0.833
89. GATAD2B ENSDARG00000005834 3855 1.606 - - 0.905 - - 0.701 - - - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
90. hoxc6b ENSDARG00000101954 967 1.604 - - - - - 0.812 0.792 - - homeobox C6b [Source:ZFIN;Acc:ZDB-GENE-000822-1]
91. araf ENSDARG00000054533 1132 1.603 - - - - - 0.727 - - 0.876 A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
92. CASK CASK 1750 1.602 - - - - - 0.794 - - 0.808
93. rnpc3 ENSDARG00000011247 778 1.6 - 0.829 - 0.771 - - - - - RNA-binding region (RNP1, RRM) containing 3 [Source:ZFIN;Acc:ZDB-GENE-060312-35]
94. NCBP1 585 1.6 - 0.812 - - - 0.788 - - - nuclear cap binding protein subunit 1
95. si:ch211-262h13.3 ENSDARG00000070898 2094 1.597 - 0.798 - - - 0.799 - - - si:ch211-262h13.3 [Source:ZFIN;Acc:ZDB-GENE-050208-532]
96. zgc:163030 ENSDARG00000069192 2963 1.594 - - 0.836 0.758 - - - - - zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
97. FRG1 ENSDARG00000056504 1196 1.594 - - - - - - 0.745 - 0.849 FSHD region gene 1 [Source:ZFIN;Acc:ZDB-GENE-050417-324]
98. mcts1 ENSDARG00000025972 4662 1.587 - - - - - - 0.796 - 0.791 malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
99. ssbp3b ENSDARG00000030155 7163 1.584 - - 0.848 - - 0.736 - - - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
100. BX294110.1 ENSDARG00000096875 1761 1.583 - 0.793 - - - 0.790 - - -

There are 2266 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA