Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mxra5b

Gene Name Gene ID Reads Annotation
mxra5b ENSDARG00000076309 190 matrix-remodelling associated 5b [Source:ZFIN;Acc:ZDB-GENE-081104-119]










Genes with expression patterns similar to mxra5b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mxra5b ENSDARG00000076309 190 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 matrix-remodelling associated 5b [Source:ZFIN;Acc:ZDB-GENE-081104-119]
2. lama5 ENSDARG00000058543 2782 1.838 - - 0.945 - - - - 0.893 - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
3. cers4a ENSDARG00000031387 19 1.835 - - - 1.000 - - - 0.835 - ceramide synthase 4a [Source:ZFIN;Acc:ZDB-GENE-020808-1]
4. IKBIP IKBIP 308 1.778 - - 0.899 - - 0.879 - - -
5. CABZ01044023.1 ENSDARG00000117734 240 1.768 - - - - - 0.926 - 0.842 -
6. zgc:153952 739 1.754 - - 0.978 - - 0.776 - - - zgc:153952, transcript variant X1
7. ATF6B 960 1.753 - - 0.985 - - 0.768 - - - activating transcription factor 6 beta
8. IGSF3 ENSDARG00000077002, ENSDARG00000115203 564 1.75 - 0.775 0.975 - - - - - - immunoglobulin superfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-243]
9. brf1a ENSDARG00000017835 206 1.733 - - 0.992 - - - - 0.741 - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
10. chchd6b ENSDARG00000045978 251 1.723 - 0.790 - - - 0.933 - - - coiled-coil-helix-coiled-coil-helix domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-041114-95]
11. GPSM3 GPSM3 257 1.714 - - 0.990 - - 0.724 - - -
12. immp1l ENSDARG00000045935 175 1.712 - - - - - 0.918 - 0.794 - inner mitochondrial membrane peptidase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-070522-4]
13. wdr46 ENSDARG00000095879 374 1.71 - 0.802 0.908 - - - - - - WD repeat domain 46 [Source:ZFIN;Acc:ZDB-GENE-040426-1264]
14. PLCE1 ENSDARG00000087921 277 1.706 - - 0.981 - - 0.725 - - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
15. tmem79b ENSDARG00000076861 154 1.676 - - - - - 0.930 - 0.746 - transmembrane protein 79b [Source:ZFIN;Acc:ZDB-GENE-120807-1]
16. igf1rb ENSDARG00000034434, ENSDARG00000110935 813 1.676 - - 0.959 - - - - 0.717 - insulin-like growth factor 1b receptor [Source:ZFIN;Acc:ZDB-GENE-020503-2]
17. sec13 ENSDARG00000054807, ENSDARG00000109318, ENSDARG00000110540 470 1.661 - - 0.960 - - 0.701 - - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2649]
18. colgalt2 ENSDARG00000014670 1932 1.631 - - 0.871 - - - - 0.760 - collagen beta(1-O)galactosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070222-1]
19. p4ha2 ENSDARG00000010085 2008 1.629 - - 0.921 - - - - 0.708 - procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030827-1]
20. CLDN23 CLDN23 2002 1.628 - - 0.808 - - - - 0.820 -
21. htra1b ENSDARG00000014907 146 1.592 - 0.768 - - - - - 0.824 - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
22. CRP CRP 136 1.583 - - - - - 0.737 - 0.846 -
23. DNAJB14 ENSDARG00000069996 144 1.58 - - - - - 0.854 - 0.726 - DnaJ (Hsp40) homolog, subfamily B, member 14 [Source:ZFIN;Acc:ZDB-GENE-061110-138]
24. ispd ENSDARG00000005034 173 1.576 - 0.749 - - - 0.827 - - - isoprenoid synthase domain containing [Source:ZFIN;Acc:ZDB-GENE-061110-16]
25. tmed3 ENSDARG00000028816, ENSDARG00000113132 1686 1.574 - - 0.785 - - - - 0.789 - transmembrane p24 trafficking protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8335]
26. xrn1 ENSDARG00000091652 2864 1.565 - - 0.799 - - - - 0.766 - 5'-3' exoribonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1203]
27. pcdh7b ENSDARG00000060610 400 1.564 - - - - - 0.726 - 0.838 - protocadherin 7b [Source:ZFIN;Acc:ZDB-GENE-081104-299]
28. BX255936.1 BX255936.1 327 1.536 - 0.737 - - - 0.799 - - -
29. ltc4s ENSDARG00000062598 138 1.533 - 0.703 - - - - - 0.830 - leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
30. CR387997.1 CR387997.1 190 1.531 - 0.728 - - - 0.803 - - -
31. si:ch211-129c21.1 ENSDARG00000024775 371 1.525 - - - - - 0.715 - 0.810 - si:ch211-129c21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5796]
32. fbxl4 ENSDARG00000026941, ENSDARG00000113167 396 1.525 - - - - - 0.802 - 0.723 - F-box and leucine-rich repeat protein 4 [Source:ZFIN;Acc:ZDB-GENE-041114-187]
33. si:ch211-241o7.5 si:ch211-241o7.5 1387 1.517 - 0.740 0.777 - - - - - -
34. zgc:111983 ENSDARG00000006588 671 1.496 - - - - - 0.787 - 0.709 - zgc:111983 [Source:ZFIN;Acc:ZDB-GENE-050417-335]
35. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 1.458 - - - - - 0.744 - 0.714 - insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
36. rpain ENSDARG00000063021 186 1.408 - - - - - 0.704 - 0.704 - RPA interacting protein [Source:ZFIN;Acc:ZDB-GENE-060825-212]
37. CT027744.3 CT027744.3 5 1 - - - 1.000 - - - - -
38. hsf4 ENSDARG00000013251 5 1 - - - 1.000 - - - - - heat shock transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-050306-18]
39. si:dkeyp-8h3.9 si:dkeyp-8h3.9 3 1 - - - 1.000 - - - - -
40. VWA5A_1 VWA5A_1 6 1 - - - 1.000 - - - - -
41. entpd2a.1 ENSDARG00000035506 14 1 - - - 1.000 - - - - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040724-187]
42. C1GALT1_1 C1GALT1_1 1 1 - - - 1.000 - - - - -
43. CU459095.1 CU459095.1 7 1 - - - 1.000 - - - - -
44. fam196ab 2 1 - - - 1.000 - - - - - family with sequence similarity 196, member Ab
45. lratb 3 1 - - - 1.000 - - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
46. CU062632.1 ENSDARG00000117236 0 1 - - - 1.000 - - - - - ubiquitin-conjugating enzyme E2O [Source:NCBI gene;Acc:101883975]
47. plscr3a ENSDARG00000093078 7 1 - - - 1.000 - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
48. wfikkn1 ENSDARG00000101364 11 1 - - - 1.000 - - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2465]
49. si:dkey-33g13.1 si:dkey-33g13.1 3 1 - - - 1.000 - - - - -
50. RMI2 ENSDARG00000103137 0 1 - - - 1.000 - - - - - RecQ mediated genome instability 2 [Source:ZFIN;Acc:ZDB-GENE-131125-13]
51. abcc13 ENSDARG00000062519 2 1 - - - 1.000 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
52. si:ch211-120e1.7 ENSDARG00000094634 14 1 - - - 1.000 - - - - - si:ch211-120e1.7 [Source:ZFIN;Acc:ZDB-GENE-070424-119]
53. si:dkey-34f9.3 ENSDARG00000077813 3 1 - - - 1.000 - - - - - si:dkey-34f9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-410]
54. prph2a ENSDARG00000038018 2 1 - - - 1.000 - - - - - peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
55. CABZ01067071.1 CABZ01067071.1 0 1 - - - 1.000 - - - - -
56. AC024175.11 AC024175.11 12 1 - - - 1.000 - - - - -
57. si:dkey-19j7.4 si:dkey-19j7.4 1 1 - - - 1.000 - - - - -
58. glsa ENSDARG00000062812 1 1 - - - 1.000 - - - - - glutaminase a [Source:ZFIN;Acc:ZDB-GENE-050204-3]
59. CABZ01067072.1 CABZ01067072.1 17 1 - - - 1.000 - - - - -
60. ENSDARG00000088134 ENSDARG00000088134 16 1 - - - 1.000 - - - - -
61. snoMBII-202_1 snoMBII-202_1 2 1 - - - 1.000 - - - - -
62. mespaa ENSDARG00000017078, ENSDARG00000114890 0 1 - - - 1.000 - - - - - mesoderm posterior aa [Source:ZFIN;Acc:ZDB-GENE-000406-8]
63. CENPQ 8 1 - - - 1.000 - - - - - centromere protein Q
64. lrp6 ENSDARG00000100143 1 1 - - - 1.000 - - - - - low density lipoprotein receptor-related protein 6 [Source:ZFIN;Acc:ZDB-GENE-090821-1]
65. CU638737.1 CU638737.1 17 1 - - - 1.000 - - - - -
66. bicc2_1 ENSDARG00000076557 6 1 - - - 1.000 - - - - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
67. zgc:113425 ENSDARG00000026616 29 1 - - - 1.000 - - - - - zgc:113425 [Source:ZFIN;Acc:ZDB-GENE-050320-128]
68. uts1 ENSDARG00000014927 35 1 - - - 1.000 - - - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
69. bcdin3d ENSDARG00000074111 0 1 - - - 1.000 - - - - - BCDIN3 domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-327]
70. srd5a2a ENSDARG00000043587 21 1 - - - 1.000 - - - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
71. PACRG ENSDARG00000087556 7 1 - - - 1.000 - - - - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
72. si:dkey-14o18.1 si:dkey-14o18.1 108 1 - - - 1.000 - - - - -
73. med8 ENSDARG00000114425 7 1 - - - 1.000 - - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
74. MAD2L2 ENSDARG00000042456 0 1 - - - 1.000 - - - - - mitotic arrest deficient 2 like 2 [Source:ZFIN;Acc:ZDB-GENE-050417-61]
75. CT025771.1 ENSDARG00000117721 13 1 - - - 1.000 - - - - -
76. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - 1.000 - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
77. cers3b ENSDARG00000036337 1 1 - - - 1.000 - - - - - ceramide synthase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-32]
78. NWD1 ENSDARG00000076110 3 1 - - - 1.000 - - - - - NACHT and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-8]
79. KLHDC8A ENSDARG00000061000 13 1 - - - 1.000 - - - - - kelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
80. CABZ01084273.1 CABZ01084273.1 16 1 - - - 1.000 - - - - -
81. si:ch211-182e10.4 ENSDARG00000070661, ENSDARG00000070757 1 1 - - - 1.000 - - - - - si:ch211-182e10.4 [Source:ZFIN;Acc:ZDB-GENE-041014-76]
82. BX324198.1 BX324198.1 12 1 - - - 1.000 - - - - -
83. si:ch211-232m19.4 19 1 - - - 1.000 - - - - - si:ch211-232m19.4
84. rpgrip1l ENSDARG00000051754 2 1 - - - 1.000 - - - - - RPGRIP1-like [Source:ZFIN;Acc:ZDB-GENE-081104-81]
85. urgcp ENSDARG00000036767 6 1 - - - 1.000 - - - - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
86. si:dkey-61m24.1 0 1 - - - 1.000 - - - - - si:dkey-61m24.1
87. svopa ENSDARG00000056833 14 1 - - - 1.000 - - - - - SV2 related protein a [Source:ZFIN;Acc:ZDB-GENE-060526-336]
88. si:ch211-274k16.4 si:ch211-274k16.4 6 1 - - - 1.000 - - - - -
89. pdha1b ENSDARG00000010555, ENSDARG00000114832 4 1 - - - 1.000 - - - - - pyruvate dehydrogenase E1 alpha 1 subunit b [Source:ZFIN;Acc:ZDB-GENE-040718-96]
90. taar14e ENSDARG00000090372, ENSDARG00000112236 0 1 - - - 1.000 - - - - - trace amine associated receptor 14e [Source:ZFIN;Acc:ZDB-GENE-041210-317]
91. gpr34b ENSDARG00000002959 0 1 - - - 1.000 - - - - - G protein-coupled receptor 34b [Source:ZFIN;Acc:ZDB-GENE-040823-1]
92. pcdh1a4 0 1 - - - 1.000 - - - - - protocadherin 1 alpha 4
93. mir30b 4 1 - - - 1.000 - - - - - microRNA 30b
94. ATP6V1C2 ENSDARG00000070440 2 1 - - - 1.000 - - - - - ATPase H+ transporting V1 subunit C2 [Source:ZFIN;Acc:ZDB-GENE-131127-65]
95. si:ch211-222k6.3 ENSDARG00000071578 127 1 - - - 1.000 - - - - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
96. gria1b ENSDARG00000032714, ENSDARG00000111658 12 1 - - - 1.000 - - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
97. iqcd ENSDARG00000035551 7 1 - - - 1.000 - - - - - IQ motif containing D [Source:ZFIN;Acc:ZDB-GENE-060526-200]
98. si:ch211-209n20.58 si:ch211-209n20.58 1 1 - - - 1.000 - - - - -
99. si:dkey-49n23.1 ENSDARG00000040920 3 1 - - - 1.000 - - - - - si:dkey-49n23.1 [Source:ZFIN;Acc:ZDB-GENE-050208-762]
100. CABZ01081748.1 ENSDARG00000102139 31 1 - - - 1.000 - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]

There are 1318 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA