Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mvb12ba

Gene Name Gene ID Reads Annotation
mvb12ba ENSDARG00000091619 18 multivesicular body subunit 12Ba [Source:ZFIN;Acc:ZDB-GENE-060929-372]










Genes with expression patterns similar to mvb12ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mvb12ba ENSDARG00000091619 18 7 - 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 multivesicular body subunit 12Ba [Source:ZFIN;Acc:ZDB-GENE-060929-372]
2. CDR2_1 CDR2_1 8 2.708 - - - 1.000 0.890 - 0.818 - -
3. edn3b ENSDARG00000086669 8 1.947 - 0.947 - 1.000 - - - - - endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
4. arl10 37 1.943 - 0.943 - - 1.000 - - - - ADP-ribosylation factor-like 10
5. tbc1d22b ENSDARG00000026988 18 1.926 - 0.947 0.979 - - - - - - TBC1 domain family, member 22B [Source:ZFIN;Acc:ZDB-GENE-091118-28]
6. CU856140.1 CU856140.1 4316 1.871 - - - 1.000 0.871 - - - -
7. park2 42 1.868 - 0.947 0.921 - - - - - - parkin RBR E3 ubiquitin protein ligase
8. CABZ01065246.2 CABZ01065246.2 45 1.818 - - - - 1.000 - 0.818 - -
9. scospondin ENSDARG00000067859 4 1.818 - - - - 1.000 - 0.818 - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
10. si:ch211-103n10.5 ENSDARG00000077504, ENSDARG00000116548 8 1.818 - - - 1.000 - - 0.818 - - si:ch211-103n10.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5155]
11. si:ch211-262h13.4 si:ch211-262h13.4 3 1.818 - - - - 1.000 - 0.818 - -
12. cx32.2 ENSDARG00000076789 23 1.804 - 0.947 - - 0.857 - - - - connexin 32.2 [Source:ZFIN;Acc:ZDB-GENE-050303-1]
13. si:dkey-92j12.5 ENSDARG00000094677 5 1.792 - - - 0.792 1.000 - - - - si:dkey-92j12.5 [Source:ZFIN;Acc:ZDB-GENE-090313-354]
14. gsdf ENSDARG00000075301 6 1.784 - 0.947 - - 0.837 - - - - gonadal somatic cell derived factor [Source:ZFIN;Acc:ZDB-GENE-101029-3]
15. CNTD1 2 1.755 - - - 0.755 1.000 - - - - cyclin N-terminal domain containing 1
16. iqca1 ENSDARG00000057276, ENSDARG00000113642 161 1.747 - 0.747 - - - - 1.000 - - IQ motif containing with AAA domain 1 [Source:ZFIN;Acc:ZDB-GENE-050208-768]
17. PLCXD1_3 PLCXD1_3 35 1.722 - - - - 0.904 - 0.818 - -
18. si:ch73-248e21.5 ENSDARG00000088283 19 1.707 - 0.758 0.949 - - - - - - si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
19. serpinf2a ENSDARG00000076448 4 1.701 - 0.883 - - - - 0.818 - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2a [Source:ZFIN;Acc:ZDB-GENE-060822-1]
20. rx3 ENSDARG00000052893 43 1.671 - - 0.833 - 0.838 - - - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
21. pdlim5a ENSDARG00000101777 357 1.659 - 0.920 - - - - 0.739 - - PDZ and LIM domain 5a [Source:ZFIN;Acc:ZDB-GENE-040718-401]
22. mir133a-1 77 1.627 - 0.778 0.849 - - - - - - microRNA 133a-1
23. crmp1 ENSDARG00000056742 332 1.617 - 0.877 0.740 - - - - - - collapsin response mediator protein 1 [Source:ZFIN;Acc:ZDB-GENE-050720-1]
24. LRP3 ENSDARG00000008485 1401 1.587 - - 0.790 - - - 0.797 - - low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
25. sema3h ENSDARG00000042616 75 1.579 - 0.731 0.848 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H [Source:ZFIN;Acc:ZDB-GENE-990715-8]
26. si:ch211-209j10.6 ENSDARG00000093317 126 1.574 - - - - 0.871 - 0.703 - - si:ch211-209j10.6 [Source:ZFIN;Acc:ZDB-GENE-090311-44]
27. spp1 ENSDARG00000044276 34 1.571 - 0.856 - - - - - 0.715 - secreted phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-050706-97]
28. si:ch211-93e11.8 ENSDARG00000075022 5 1.564 - - - - 0.746 - 0.818 - - si:ch211-93e11.8 [Source:ZFIN;Acc:ZDB-GENE-121214-283]
29. dachb ENSDARG00000034785, ENSDARG00000111845 109 1.459 - 0.748 - - - - 0.711 - - dachshund b [Source:ZFIN;Acc:ZDB-GENE-020402-4]
30. si:dkey-27p18.6 4 1 - - - 1.000 - - - - - si:dkey-27p18.6, transcript variant X1
31. si:ch211-145h19.2 7 1 - - - 1.000 - - - - - si:ch211-145h19.2
32. HEPHL1 HEPHL1 309 1 - - - 1.000 - - - - -
33. U1_36 U1_36 0 1 - - - - 1.000 - - - -
34. SNORA55 SNORA55 0 1 - - - 1.000 - - - - -
35. fgl2 fgl2 9 1 - - - - 1.000 - - - -
36. si:dkey-15f23.2 si:dkey-15f23.2 2 1 - - - - 1.000 - - - -
37. si:ch211-24n20.3 si:ch211-24n20.3 0 1 - - - - 1.000 - - - -
38. GGT5 GGT5 1 1 - - - - 1.000 - - - -
39. CABZ01080134.1 CABZ01080134.1 2 1 - - - - 1.000 - - - -
40. nr5a1a ENSDARG00000103176 12 1 - - - 1.000 - - - - - nuclear receptor subfamily 5, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-010504-1]
41. si:dkey-25i10.3 si:dkey-25i10.3 5 1 - - - - 1.000 - - - -
42. CABZ01059406.1 ENSDARG00000088775 1 1 - - - 1.000 - - - - -
43. RAB31 0 1 - - - 1.000 - - - - - RAB31, member RAS oncogene family, transcript variant X1
44. eef1a2 ENSDARG00000006838, ENSDARG00000111569 2 1 - - - - 1.000 - - - - eukaryotic translation elongation factor 1 alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040718-64]
45. vti1a ENSDARG00000045065 7 1 - - - 1.000 - - - - - vesicle transport through interaction with t-SNAREs 1A [Source:ZFIN;Acc:ZDB-GENE-050809-135]
46. si:ch211-203b20.7 ENSDARG00000053036, ENSDARG00000113237 0 1 - - - - 1.000 - - - - si:ch211-203b20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-302]
47. si:dkey-20i20.10 ENSDARG00000095455 3 1 - - - - 1.000 - - - - si:dkey-20i20.10 [Source:ZFIN;Acc:ZDB-GENE-060503-905]
48. BX005106.1 BX005106.1 22 1 - - - - 1.000 - - - -
49. LGALS8_1 LGALS8_1 29 1 - - - - - - 1.000 - -
50. slc35f1 ENSDARG00000053003 0 1 - - - 1.000 - - - - - solute carrier family 35, member F1 [Source:ZFIN;Acc:ZDB-GENE-060503-463]
51. U1 U1 0 1 - - - - 1.000 - - - -
52. ENSDARG00000063316 ENSDARG00000063316 4 1 - - - 1.000 - - - - -
53. irgq2 ENSDARG00000068657 4 1 - - - 1.000 - - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
54. si:dkey-267i17.2 si:dkey-267i17.2 0 1 - - - 1.000 - - - - -
55. si:dkey-58f10.10 ENSDARG00000094284 4 1 - - - 1.000 - - - - - si:dkey-58f10.10 [Source:ZFIN;Acc:ZDB-GENE-060526-312]
56. cep170b ENSDARG00000074636 4 1 - - - 1.000 - - - - - centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
57. cel.1 ENSDARG00000017490 4 1 - - - - 1.000 - - - - carboxyl ester lipase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1201]
58. GPRIN1 10 1 - - - - 1.000 - - - - G protein regulated inducer of neurite outgrowth 1
59. Metazoa_SRP_18 Metazoa_SRP_18 4 1 - - - 1.000 - - - - -
60. CR391991.2 ENSDARG00000103510 0 1 - - - - 1.000 - - - -
61. CACNG5 CACNG5 1 1 - - - 1.000 - - - - -
62. ZNF423 ENSDARG00000059707 11 1 - - - 1.000 - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
63. map3k9 ENSDARG00000013491 1 1 - - - - 1.000 - - - - mitogen-activated protein kinase kinase kinase 9 [Source:ZFIN;Acc:ZDB-GENE-081113-5]
64. si:ch211-57m13.1 ENSDARG00000095927 1 1 - - - - 1.000 - - - - si:ch211-57m13.1 [Source:ZFIN;Acc:ZDB-GENE-090312-43]
65. CR356223.2 ENSDARG00000100655 4 1 - - - 1.000 - - - - -
66. si:ch211-238p8.10 ENSDARG00000115284 0 1 - - - 1.000 - - - - - si:ch211-238p8.10 [Source:ZFIN;Acc:ZDB-GENE-091117-24]
67. TTC21A 0 1 - - - 1.000 - - - - - tetratricopeptide repeat domain 21A, transcript variant X4
68. CABZ01011032.1 CABZ01011032.1 1 1 - - - 1.000 - - - - -
69. tmprss9 ENSDARG00000029841 435 1 - - - - - - 1.000 - - transmembrane serine protease 9 [Source:ZFIN;Acc:ZDB-GENE-050208-573]
70. CABZ01075242.1 ENSDARG00000114227 9 1 - - - - 1.000 - - - -
71. si:ch211-222j14.1 si:ch211-222j14.1 0 1 - - - 1.000 - - - - -
72. elmod3 ENSDARG00000074742 6 1 - - - 1.000 - - - - - ELMO/CED-12 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-471]
73. cnn1a ENSDARG00000017193 6 1 - 1.000 - - - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
74. si:busm1-180g5.7 si:busm1-180g5.7 15 1 - - - 1.000 - - - - -
75. agbl5 ENSDARG00000045900 2 1 - - - 1.000 - - - - - ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
76. amy2a ENSDARG00000013856 13 1 - - - - 1.000 - - - - amylase, alpha 2A (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040426-2393]
77. arhgap30 arhgap30 6 1 - - - 1.000 - - - - -
78. si:ch73-123f19.2 si:ch73-123f19.2 0 1 - - - 1.000 - - - - -
79. si:ch73-196i15.4 si:ch73-196i15.4 0 1 - - - - 1.000 - - - -
80. ABCC6 ABCC6 5 1 - - - 1.000 - - - - -
81. U6_21 U6_21 0 1 - - - 1.000 - - - - -
82. si:dkey-96n2.1 ENSDARG00000092172 0 1 - - - 1.000 - - - - - si:dkey-96n2.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1759]
83. lhx8b ENSDARG00000042145 0 1 - - - - 1.000 - - - - LIM homeobox 8b [Source:ZFIN;Acc:ZDB-GENE-081105-153]
84. C11H3orf83_1 C11H3orf83_1 3 1 - - - 1.000 - - - - -
85. il11b ENSDARG00000058557 17 1 - - - 1.000 - - - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
86. olig1 ENSDARG00000040948 1 1 - - - - 1.000 - - - - oligodendrocyte transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050107-2]
87. si:ch211-153l6.4 si:ch211-153l6.4 45 1 - 1.000 - - - - - - -
88. CCSER1 ENSDARG00000075919 16 1 - - - 1.000 - - - - - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
89. GPX2 ENSDARG00000089149 10 1 - - - 1.000 - - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
90. sox8 sox8 109 1 - - - 1.000 - - - - -
91. si:ch211-278f21.4 si:ch211-278f21.4 0 1 - - - 1.000 - - - - -
92. si:ch73-67c22.3 si:ch73-67c22.3 30 1 - - - 1.000 - - - - -
93. RAP1GDS1 ENSDARG00000073741 0 1 - - - 1.000 - - - - - Rap1 GTPase-GDP dissociation stimulator 1 [Source:HGNC Symbol;Acc:HGNC:9859]
94. BX000999.1 BX000999.1 0 1 - - - - 1.000 - - - -
95. U2_2 U2_2 2 1 - - - - 1.000 - - - -
96. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - 1.000 - - - - -
97. CABZ01112401.1 CABZ01112401.1 0 1 - - - 1.000 - - - - -
98. SNORA53 SNORA53 10 1 - - - - 1.000 - - - -
99. erap2 ENSDARG00000098618 16 1 - - - 1.000 - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
100. kcnma1b 0 1 - - - 1.000 - - - - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1b

There are 911 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA