Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mto1

Gene Name Gene ID Reads Annotation
mto1 ENSDARG00000055679 859 mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]










Genes with expression patterns similar to mto1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mto1 ENSDARG00000055679 859 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
2. tcp11l2 ENSDARG00000027316 1906 2.41 0.928 - - - - - 0.714 - 0.768 t-complex 11, testis-specific-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1956]
3. CABZ01038493.1 ENSDARG00000117625 983 2.367 - - - - - - 0.781 0.736 0.850
4. lyrm4 ENSDARG00000078352 2245 2.361 0.932 - - - - 0.724 - 0.705 - LYR motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-081104-295]
5. KIAA0355 3250 2.357 0.743 0.905 - - - - - 0.709 - KIAA0355 ortholog, transcript variant X1
6. ttc38 ENSDARG00000042188, ENSDARG00000113493 307 1.908 - 0.930 - - - - - - 0.978 tetratricopeptide repeat domain 38 [Source:ZFIN;Acc:ZDB-GENE-050522-318]
7. si:ch73-138e16.8 175 1.902 - 0.937 - - - - - - 0.965 si:ch73-138e16.8
8. NAALAD2 ENSDARG00000021383 704 1.874 0.910 - - - - - - - 0.964 N-acetylated alpha-linked acidic dipeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1025]
9. endog ENSDARG00000058865 679 1.867 - 0.899 - - - - - - 0.968 endonuclease G [Source:ZFIN;Acc:ZDB-GENE-050522-402]
10. gnb4b ENSDARG00000115383 7457 1.865 0.941 - - - - - - - 0.924 guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
11. cby1 ENSDARG00000077409, ENSDARG00000113018 772 1.863 0.945 - - - - - - - 0.918 chibby homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5074]
12. prdm9 ENSDARG00000005382, ENSDARG00000110150 572 1.86 0.940 0.920 - - - - - - - PR domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1319]
13. cab39l1 ENSDARG00000021374, ENSDARG00000112995 2033 1.854 0.907 - - - - - - - 0.947 calcium binding protein 39, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2897]
14. cib1 ENSDARG00000103118 291 1.84 0.971 0.869 - - - - - - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
15. pdk1 ENSDARG00000013128 526 1.835 0.877 0.958 - - - - - - - pyruvate dehydrogenase kinase, isozyme 1 [Source:ZFIN;Acc:ZDB-GENE-091204-402]
16. sec22a ENSDARG00000078328 1207 1.815 0.892 0.923 - - - - - - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
17. magi3 magi3 962 1.807 - 0.906 - - - - - - 0.901
18. rnf170 ENSDARG00000104069 838 1.806 0.841 - - - - - - - 0.965 ring finger protein 170 [Source:ZFIN;Acc:ZDB-GENE-040426-2572]
19. bmpr1ba ENSDARG00000104100 828 1.793 0.916 0.877 - - - - - - - bone morphogenetic protein receptor, type IBa [Source:ZFIN;Acc:ZDB-GENE-991208-8]
20. zbtb4 ENSDARG00000105255 362 1.787 0.884 0.903 - - - - - - - zinc finger and BTB domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-100318-5]
21. cldnf ENSDARG00000043133 1006 1.785 0.877 - - - - - - - 0.908 claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
22. lypd6b ENSDARG00000077643 650 1.783 - 0.830 - - - - - - 0.953 LY6/PLAUR domain containing 6B [Source:ZFIN;Acc:ZDB-GENE-050522-38]
23. mpv17l2 ENSDARG00000056367, ENSDARG00000112107 352 1.771 0.912 0.859 - - - - - - - MPV17 mitochondrial membrane protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-306]
24. klf15 ENSDARG00000091127 1037 1.771 - 0.885 - - - - - - 0.886 Kruppel-like factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-7844]
25. EPT1 EPT1 1912 1.765 - 0.860 - - - - - - 0.905
26. Metazoa_SRP_7 Metazoa_SRP_7 513 1.762 0.862 0.900 - - - - - - -
27. coro7 ENSDARG00000089616 2141 1.76 - 0.884 - - - - - - 0.876 coronin 7 [Source:ZFIN;Acc:ZDB-GENE-050706-137]
28. tp53i11b ENSDARG00000006025 569 1.74 - - - - - - - 0.762 0.978 tumor protein p53 inducible protein 11b [Source:ZFIN;Acc:ZDB-GENE-030131-6328]
29. mov10b.1 ENSDARG00000061177 370 1.729 - - - - - - - 0.768 0.961 Moloney leukemia virus 10b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9089]
30. loxl2b ENSDARG00000044074 1919 1.728 0.771 0.957 - - - - - - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
31. TRIM14 TRIM14 1424 1.725 0.920 0.805 - - - - - - -
32. map2k2a ENSDARG00000006609 856 1.725 0.847 0.878 - - - - - - - mitogen-activated protein kinase kinase 2a [Source:ZFIN;Acc:ZDB-GENE-041027-1]
33. CHMP4B CHMP4B 1387 1.723 - 0.853 - - - - - - 0.870
34. map3k7 ENSDARG00000020469 2845 1.718 0.946 0.772 - - - - - - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
35. zgc:174275 ENSDARG00000099845 172 1.717 - 0.936 - - - - 0.781 - - zgc:174275 [Source:ZFIN;Acc:ZDB-GENE-080305-5]
36. CABZ01092303.1 CABZ01092303.1 8825 1.715 0.867 - - - - - - - 0.848
37. b3gnt5a ENSDARG00000018971 938 1.714 - - - - - - - 0.813 0.901 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-030131-8470]
38. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 1.713 0.955 0.758 - - - - - - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
39. mrpl16 ENSDARG00000075325 592 1.711 0.931 - - - - 0.780 - - - mitochondrial ribosomal protein L16 [Source:ZFIN;Acc:ZDB-GENE-041122-1]
40. plch1 ENSDARG00000079253 1216 1.71 - - - - - - 0.752 - 0.958 phospholipase C, eta 1 [Source:ZFIN;Acc:ZDB-GENE-060503-398]
41. dus3l ENSDARG00000099528 1192 1.708 - - - - - - - 0.743 0.965 dihydrouridine synthase 3-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1260]
42. mrps25 ENSDARG00000041306 3654 1.7 - 0.794 - - - - - - 0.906 mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
43. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.699 - 0.776 - - - - - - 0.923 G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
44. ZC3H12A_1 ZC3H12A_1 558 1.698 0.913 0.785 - - - - - - -
45. CASKIN2_1 CASKIN2_1 2299 1.697 0.843 - - - - - - - 0.854
46. ZBTB16 ZBTB16 3385 1.691 0.915 0.776 - - - - - - -
47. rhov ENSDARG00000070434 808 1.69 0.946 0.744 - - - - - - - ras homolog family member V [Source:ZFIN;Acc:ZDB-GENE-031002-10]
48. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 1.678 0.953 - - - - - - 0.725 - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
49. erbb3a ENSDARG00000006202 903 1.677 - 0.704 - - - - - - 0.973 erb-b2 receptor tyrosine kinase 3a [Source:ZFIN;Acc:ZDB-GENE-030916-3]
50. lrrfip2 ENSDARG00000010400 2633 1.669 0.824 0.845 - - - - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
51. ppil4 ENSDARG00000043854, ENSDARG00000114623 858 1.668 0.933 0.735 - - - - - - - peptidylprolyl isomerase (cyclophilin)-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6251]
52. spry4 ENSDARG00000068732 2091 1.663 - 0.821 - - - - - - 0.842 sprouty homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010803-2]
53. cry4 ENSDARG00000011890 980 1.663 - - - - - - - 0.722 0.941 cryptochrome circadian clock 4 [Source:ZFIN;Acc:ZDB-GENE-010426-7]
54. clic1 ENSDARG00000103340 2235 1.662 0.949 0.713 - - - - - - - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
55. sumo3b ENSDARG00000035993 3414 1.662 0.907 0.755 - - - - - - - small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
56. C6H6orf106 C6H6orf106 2940 1.661 0.948 - - - - 0.713 - - -
57. phf20b ENSDARG00000038737, ENSDARG00000111662, ENSDARG00000116554 1385 1.659 0.921 - - - - 0.738 - - - PHD finger protein 20, b [Source:ZFIN;Acc:ZDB-GENE-040822-33]
58. ide ENSDARG00000075570 4331 1.658 0.707 - - - - - - - 0.951 insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
59. surf1 ENSDARG00000003592 551 1.652 0.706 0.946 - - - - - - - surfeit 1 [Source:ZFIN;Acc:ZDB-GENE-041108-2]
60. tiam1a ENSDARG00000078430 2482 1.65 0.935 0.715 - - - - - - - T cell lymphoma invasion and metastasis 1a [Source:ZFIN;Acc:ZDB-GENE-080325-1]
61. USO1 ENSDARG00000019581 1617 1.649 0.921 - - - - 0.728 - - - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
62. hat1 ENSDARG00000034916 5712 1.645 0.783 - - - - - - - 0.862 histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
63. UBE2S ENSDARG00000031775, ENSDARG00000114827 1890 1.637 0.920 - - - - - - 0.717 - ubiquitin-conjugating enzyme E2S [Source:ZFIN;Acc:ZDB-GENE-050913-92]
64. SEC16A 1707 1.637 - - - - - - - 0.798 0.839 SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X3
65. gpcpd1 ENSDARG00000016011 2563 1.635 0.915 0.720 - - - - - - - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
66. herpud1 ENSDARG00000024314 1207 1.633 0.850 0.783 - - - - - - - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 [Source:ZFIN;Acc:ZDB-GENE-050913-47]
67. TP53BP1 ENSDARG00000079000 997 1.628 - 0.811 - - - - - 0.817 - tumor protein p53 binding protein, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3695]
68. lepr ENSDARG00000070961, ENSDARG00000112744, ENSDARG00000114564 1014 1.62 - 0.912 - - - - - 0.708 - leptin receptor [Source:ZFIN;Acc:ZDB-GENE-080104-1]
69. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 1.613 - 0.904 - - - - - - 0.709 ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
70. CHST5 CHST5 1293 1.61 0.799 - - - - - - 0.811 -
71. fam129ba ENSDARG00000062970 1578 1.608 0.893 0.715 - - - - - - - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
72. immt ENSDARG00000102874 3435 1.606 - 0.820 - - - - - - 0.786 inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
73. fam214a ENSDARG00000040452, ENSDARG00000115985 630 1.606 - 0.849 - - - - - 0.757 - family with sequence similarity 214, member A [Source:ZFIN;Acc:ZDB-GENE-050419-204]
74. piezo1 ENSDARG00000076870 4704 1.601 - 0.721 - - - - - - 0.880 piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
75. nuf2 ENSDARG00000034624 2252 1.595 - 0.817 - - - - - - 0.778 NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
76. tmed7 ENSDARG00000046022 2435 1.594 0.889 0.705 - - - - - - - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
77. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.594 0.866 - - - - - - 0.728 - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
78. si:ch211-286b5.5 ENSDARG00000096661 3136 1.592 0.834 - - - - - - - 0.758 si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]
79. lmo4a ENSDARG00000013853, ENSDARG00000111873, ENSDARG00000113473 2584 1.591 - 0.779 - - - - - - 0.812 LIM domain only 4a [Source:ZFIN;Acc:ZDB-GENE-010702-1]
80. tti1 ENSDARG00000004114 203 1.586 - - - - - - 0.749 0.837 - TELO2 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-080819-3]
81. b4galt1 ENSDARG00000002634 1076 1.579 - 0.789 - - - - - 0.790 - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050417-236]
82. mrpl37 ENSDARG00000062916 1600 1.577 0.809 - - - - - 0.768 - - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
83. msrb3 ENSDARG00000045658 988 1.575 - 0.869 - - - - 0.706 - - methionine sulfoxide reductase B3 [Source:ZFIN;Acc:ZDB-GENE-040625-74]
84. ahsa1 ahsa1 2012 1.575 - 0.848 - - - - 0.727 - -
85. uck2b ENSDARG00000022213 1542 1.575 - 0.853 - - - - 0.722 - - uridine-cytidine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5265]
86. glipr2l ENSDARG00000016837 440 1.574 0.874 - - - - - - 0.700 - GLI pathogenesis-related 2, like [Source:ZFIN;Acc:ZDB-GENE-041010-53]
87. blmh ENSDARG00000025977 1011 1.546 - 0.832 - - - 0.714 - - - bleomycin hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-8485]
88. egln1 egln1 3746 1.545 - - - - - - 0.780 - 0.765
89. cry2a cry2a 2728 1.542 0.804 - - - - - - - 0.738
90. SH3D21 ENSDARG00000099448 1726 1.536 0.801 - - - - - - - 0.735 SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
91. thrap3b ENSDARG00000098228 4396 1.535 0.767 0.768 - - - - - - - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
92. mpv17 ENSDARG00000032431 1225 1.525 0.778 0.747 - - - - - - - MpV17 mitochondrial inner membrane protein [Source:ZFIN;Acc:ZDB-GENE-040426-1168]
93. CPAMD8 ENSDARG00000056530 3481 1.524 0.716 0.808 - - - - - - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
94. dnmt3b dnmt3b 2522 1.522 - 0.774 - - - - 0.748 - -
95. vps26a ENSDARG00000056549, ENSDARG00000110388 2650 1.514 - 0.799 - - - - - - 0.715 VPS26, retromer complex component A [Source:ZFIN;Acc:ZDB-GENE-040426-1108]
96. akirin2 ENSDARG00000058729 13245 1.512 0.799 - - - - 0.713 - - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
97. rac2 ENSDARG00000038010 5837 1.509 - 0.702 - - - - - - 0.807 Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
98. crebbpa ENSDARG00000104609 1739 1.509 - 0.707 - - - - - - 0.802 CREB binding protein a [Source:ZFIN;Acc:ZDB-GENE-050208-439]
99. arhgap12b ENSDARG00000026482, ENSDARG00000109973 1142 1.477 - - - - - 0.769 0.708 - - Rho GTPase activating protein 12b [Source:ZFIN;Acc:ZDB-GENE-040426-1727]
100. ppp2r1b ppp2r1b 3469 1.474 - 0.726 - - - - - - 0.748

There are 1614 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA