Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mthfd2

Gene Name Gene ID Reads Annotation
mthfd2 ENSDARG00000098646, ENSDARG00000112356, ENSDARG00000117060 179 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase [Source:ZFIN;Acc:ZDB-GENE-040704-20]










Genes with expression patterns similar to mthfd2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mthfd2 ENSDARG00000098646, ENSDARG00000112356, ENSDARG00000117060 179 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase [Source:ZFIN;Acc:ZDB-GENE-040704-20]
2. drd2b ENSDARG00000011091, ENSDARG00000111351 130 1.68 - 0.771 - 0.909 - - - - - dopamine receptor D2b [Source:ZFIN;Acc:ZDB-GENE-030910-2]
3. dfna5 dfna5 361 1.679 - 0.915 - 0.764 - - - - -
4. CT573393.1 CT573393.1 97 1.658 - 0.745 - 0.913 - - - - -
5. htra1b ENSDARG00000014907 146 1.633 - 0.755 - 0.878 - - - - - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
6. nsun3 ENSDARG00000013023 136 1.632 - 0.875 - 0.757 - - - - - NOP2/Sun domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050706-95]
7. BX537137.1 ENSDARG00000092436 77 1.608 - - - 0.833 - 0.775 - - - gastrula zinc finger protein XlCGF7.1 [Source:NCBI gene;Acc:100148466]
8. si:ch211-209a2.1 250 1.571 - - - 0.855 - 0.716 - - - si:ch211-209a2.1, transcript variant X2
9. HNRNPH3 ENSDARG00000039466, ENSDARG00000113164, ENSDARG00000114248 551 1.569 - - - 0.841 - 0.728 - - - heterogeneous nuclear ribonucleoprotein H3 (2H9) [Source:ZFIN;Acc:ZDB-GENE-060421-3878]
10. ppp1r12c ENSDARG00000052423 183 1.537 - - - 0.812 - 0.725 - - - protein phosphatase 1, regulatory subunit 12C [Source:ZFIN;Acc:ZDB-GENE-010724-11]
11. PIGG PIGG 106 1.534 - 0.748 - - - 0.786 - - -
12. GJD4 ENSDARG00000116895 139 1.531 - 0.742 - 0.789 - - - - - gap junction protein delta 4 [Source:HGNC Symbol;Acc:HGNC:23296]
13. syngr2b ENSDARG00000104470 111 1.527 - 0.782 - 0.745 - - - - - synaptogyrin 2b [Source:ZFIN;Acc:ZDB-GENE-070424-19]
14. si:ch211-236g6.1 ENSDARG00000071590 28 1.524 - 0.762 - - - 0.762 - - - si:ch211-236g6.1 [Source:ZFIN;Acc:ZDB-GENE-050208-448]
15. si:ch211-162i8.6 si:ch211-162i8.6 15 1.514 - 0.770 - - - 0.744 - - -
16. si:ch211-225b11.1 ENSDARG00000002405 172 1.504 - - - 0.730 - 0.774 - - - si:ch211-225b11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-39]
17. pold3 ENSDARG00000076169 694 1.452 - 0.708 - - - 0.744 - - - polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
18. slx4ip ENSDARG00000039069 260 1.44 - 0.733 - - - 0.707 - - - SLX4 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-1365]
19. exoc3l1 ENSDARG00000051899, ENSDARG00000113508, ENSDARG00000114148 195 0.965 - 0.965 - - - - - - - exocyst complex component 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-36]
20. grxcr1 ENSDARG00000069865 22 0.953 - - - 0.953 - - - - - glutaredoxin, cysteine rich 1 [Source:ZFIN;Acc:ZDB-GENE-070424-166]
21. UBXN11 ENSDARG00000053828 22 0.95 - - - 0.950 - - - - - UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
22. BX004816.4 BX004816.4 33 0.95 - - - 0.950 - - - - -
23. mei4 ENSDARG00000043912 10 0.949 - - - 0.949 - - - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
24. PEX5L PEX5L 179 0.949 - - - 0.949 - - - - -
25. RNF39 RNF39 52 0.948 - - - 0.948 - - - - -
26. ARHGAP42 ARHGAP42 53 0.947 - - - 0.947 - - - - -
27. CR790368.1 ENSDARG00000100936 20 0.945 - - - 0.945 - - - - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
28. KCNB2 ENSDARG00000088842 35 0.944 - - - 0.944 - - - - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
29. CIR1 ENSDARG00000099733 66 0.944 - - - 0.944 - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
30. map4k2l_1 map4k2l_1 77 0.943 - - - 0.943 - - - - -
31. ak7b ENSDARG00000017023 25 0.942 - - - 0.942 - - - - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
32. amh ENSDARG00000014357 15 0.941 - - - 0.941 - - - - - anti-Mullerian hormone [Source:ZFIN;Acc:ZDB-GENE-050706-192]
33. BX088603.3 ENSDARG00000117713 18 0.941 - - - 0.941 - - - - -
34. Metazoa_SRP_19 Metazoa_SRP_19 17 0.941 - - - 0.941 - - - - -
35. SERINC3 SERINC3 21 0.941 - - - 0.941 - - - - -
36. fam160b1 ENSDARG00000060168 22 0.939 - 0.939 - - - - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
37. LRRC61 ENSDARG00000077357 55 0.939 - - - 0.939 - - - - - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
38. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 0.938 - - - 0.938 - - - - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
39. pex1 ENSDARG00000098904 168 0.934 - 0.934 - - - - - - - peroxisomal biogenesis factor 1 [Source:ZFIN;Acc:ZDB-GENE-070530-1]
40. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 0.934 - - - 0.934 - - - - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
41. abl2 ENSDARG00000013841 145 0.934 - - - 0.934 - - - - - c-abl oncogene 2, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020809-2]
42. luzp2 ENSDARG00000068247 80 0.934 - - - 0.934 - - - - - leucine zipper protein 2 [Source:ZFIN;Acc:ZDB-GENE-060503-278]
43. krt1-c5 ENSDARG00000026979 325 0.934 - - - 0.934 - - - - - keratin, type 1, gene c5 [Source:ZFIN;Acc:ZDB-GENE-060316-3]
44. homer1b_1 ENSDARG00000101759 259 0.933 - 0.933 - - - - - - - homer scaffold protein 1b [Source:ZFIN;Acc:ZDB-GENE-040801-44]
45. parp12a ENSDARG00000042496 82 0.933 - - - 0.933 - - - - - poly (ADP-ribose) polymerase family, member 12a [Source:ZFIN;Acc:ZDB-GENE-050419-6]
46. CR788231.1 CR788231.1 61 0.932 - - - 0.932 - - - - -
47. gpr22 gpr22 115 0.931 - - - 0.931 - - - - -
48. megf11 ENSDARG00000062686 230 0.931 - - - 0.931 - - - - - multiple EGF-like-domains 11 [Source:ZFIN;Acc:ZDB-GENE-060503-252]
49. si:dkey-17e6.2 si:dkey-17e6.2 72 0.93 - - - 0.930 - - - - -
50. VDR VDR 489 0.929 - - - 0.929 - - - - -
51. SMARCA4 ENSDARG00000104339 48 0.929 - - - 0.929 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
52. CU463790.1 CU463790.1 60 0.926 - - - 0.926 - - - - -
53. camk1db ENSDARG00000017446 47 0.926 - - - 0.926 - - - - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
54. npdc1 npdc1 221 0.924 - - - 0.924 - - - - -
55. CR790363.1 ENSDARG00000097364 145 0.923 - - - 0.923 - - - - -
56. atp2b1b ENSDARG00000007788 56 0.921 - - - 0.921 - - - - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
57. ubxn8 ENSDARG00000098902, ENSDARG00000113836 152 0.916 - - - 0.916 - - - - - UBX domain protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-266]
58. lef1 ENSDARG00000031894 492 0.916 - - - 0.916 - - - - - lymphoid enhancer-binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-990714-26]
59. megf6a ENSDARG00000079199 103 0.915 - - - 0.915 - - - - - multiple EGF-like-domains 6a [Source:ZFIN;Acc:ZDB-GENE-090312-12]
60. NACC2 160 0.914 - - - 0.914 - - - - - NACC family member 2
61. erbb3b ENSDARG00000036993, ENSDARG00000110287 85 0.914 - - - 0.914 - - - - - erb-b2 receptor tyrosine kinase 3b [Source:ZFIN;Acc:ZDB-GENE-050107-1]
62. MAP1S_1 MAP1S_1 1117 0.912 - - - 0.912 - - - - -
63. tmem129 ENSDARG00000075346 109 0.912 - - - 0.912 - - - - - transmembrane protein 129, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2796]
64. d2hgdh ENSDARG00000060210 362 0.911 - - - 0.911 - - - - - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
65. CU856207.1 CU856207.1 87 0.91 - 0.910 - - - - - - -
66. IGSF10 ENSDARG00000077497 317 0.905 - 0.905 - - - - - - - immunoglobulin superfamily, member 10 [Source:ZFIN;Acc:ZDB-GENE-130530-827]
67. CLRN2 ENSDARG00000070321, ENSDARG00000110932 42 0.905 - - - 0.905 - - - - - clarin 2 [Source:ZFIN;Acc:ZDB-GENE-061207-64]
68. fbxo32 ENSDARG00000040277 93 0.903 - - - 0.903 - - - - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
69. arhgef28 ENSDARG00000060415 142 0.899 - - - 0.899 - - - - - Rho guanine nucleotide exchange factor (GEF) 28 [Source:ZFIN;Acc:ZDB-GENE-060531-28]
70. elf2a ENSDARG00000019459 655 0.899 - - - 0.899 - - - - - E74-like factor 2a (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-040822-41]
71. si:dkey-3d18.4 si:dkey-3d18.4 43 0.897 - - - - - 0.897 - - -
72. CMKLR1 ENSDARG00000090890 36 0.896 - 0.896 - - - - - - - chemokine-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-060526-126]
73. HIP1R_1 HIP1R_1 129 0.896 - - - 0.896 - - - - -
74. ncam1b ENSDARG00000007220 233 0.895 - - - 0.895 - - - - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
75. coro2ba ENSDARG00000079440 420 0.893 - - - 0.893 - - - - - coronin, actin binding protein, 2Ba [Source:ZFIN;Acc:ZDB-GENE-050518-1]
76. rassf4 ENSDARG00000012460 43 0.892 - - - 0.892 - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
77. si:ch211-225b11.4 ENSDARG00000093563 42 0.891 - - - 0.891 - - - - - si:ch211-225b11.4 [Source:ZFIN;Acc:ZDB-GENE-060526-114]
78. kcnmb2 ENSDARG00000006568 95 0.89 - 0.890 - - - - - - - potassium large conductance calcium-activated channel, subfamily M, beta member 2 [Source:ZFIN;Acc:ZDB-GENE-050320-97]
79. KHDRBS3 ENSDARG00000101020 408 0.89 - - - 0.890 - - - - - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
80. si:ch211-199m9.3 50 0.889 - - - 0.889 - - - - - si:ch211-199m9.3, transcript variant X3
81. ENSDARG00000023499 ENSDARG00000023499 395 0.889 - - - 0.889 - - - - -
82. clock3 clock3 136 0.886 - - - 0.886 - - - - -
83. ikbke ENSDARG00000070606, ENSDARG00000111682, ENSDARG00000111787 54 0.885 - 0.885 - - - - - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon [Source:ZFIN;Acc:ZDB-GENE-040718-251]
84. efhc1 ENSDARG00000009743 113 0.885 - - - 0.885 - - - - - EF-hand domain (C-terminal) containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1300]
85. flj11011l ENSDARG00000045360, ENSDARG00000114911 332 0.883 - - - 0.883 - - - - - hypothetical protein FLJ11011-like (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-050113-1]
86. ift88 ENSDARG00000027234, ENSDARG00000113909 168 0.879 - 0.879 - - - - - - - intraflagellar transport 88 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-574]
87. wdr96 wdr96 31 0.879 - 0.879 - - - - - - -
88. nlgn3a ENSDARG00000104786 91 0.878 - - - 0.878 - - - - - neuroligin 3a [Source:ZFIN;Acc:ZDB-GENE-071219-1]
89. tsnax ENSDARG00000115282 99 0.878 - - - 0.878 - - - - - translin-associated factor X [Source:ZFIN;Acc:ZDB-GENE-050913-80]
90. zgc:162612 ENSDARG00000079699 244 0.877 - 0.877 - - - - - - - zgc:162612 [Source:ZFIN;Acc:ZDB-GENE-070410-88]
91. si:dkey-22l11.6 ENSDARG00000070126 27 0.877 - 0.877 - - - - - - - si:dkey-22l11.6 [Source:ZFIN;Acc:ZDB-GENE-041210-251]
92. rgs12a ENSDARG00000009610 284 0.877 - 0.877 - - - - - - - regulator of G protein signaling 12a [Source:ZFIN;Acc:ZDB-GENE-030131-2614]
93. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 0.877 - - - 0.877 - - - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
94. hnrnpa3 ENSDARG00000059351 453 0.877 - - - 0.877 - - - - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
95. si:dkey-242k1.6 ENSDARG00000101205 112 0.876 - - - 0.876 - - - - - si:dkey-242k1.6 [Source:ZFIN;Acc:ZDB-GENE-041008-84]
96. tk2 ENSDARG00000046127, ENSDARG00000111531 204 0.874 - 0.874 - - - - - - - thymidine kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-243]
97. nol6 ENSDARG00000059711, ENSDARG00000115621 853 0.873 - - - - - 0.873 - - - nucleolar protein 6 (RNA-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-6294]
98. kctd1 ENSDARG00000074056 652 0.873 - - - 0.873 - - - - - potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
99. chst14 ENSDARG00000043011 345 0.872 - - - 0.872 - - - - - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 [Source:ZFIN;Acc:ZDB-GENE-040401-3]
100. nmnat1 ENSDARG00000105748 102 0.871 - - - 0.871 - - - - - nicotinamide nucleotide adenylyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-101]

There are 583 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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