Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mt-nd5

Gene Name Gene ID Reads Annotation
mt-nd5 ENSDARG00000063921 21268 NADH dehydrogenase 5, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-12]










Genes with expression patterns similar to mt-nd5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mt-nd5 ENSDARG00000063921 21268 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NADH dehydrogenase 5, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-12]
2. hypk ENSDARG00000059725 20584 2.646 - - 0.767 - - 0.954 0.925 - - huntingtin interacting protein K [Source:ZFIN;Acc:ZDB-GENE-080515-6]
3. phb ENSDARG00000057414 9551 2.566 - - - - 0.707 0.923 0.936 - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
4. mrpl11 ENSDARG00000013075 2927 2.446 - 0.798 0.859 - - - 0.789 - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
5. coq9 ENSDARG00000023583, ENSDARG00000110255, ENSDARG00000111424 6051 1.857 - 0.934 - - - - 0.923 - - coenzyme Q9 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061207-37]
6. pcmt ENSDARG00000015201 5132 1.839 - - - - - 0.922 0.917 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
7. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 1.814 - - - 0.943 - 0.871 - - - Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
8. lrpprc ENSDARG00000043970 3847 1.81 - - - 0.964 - - 0.846 - - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
9. pcca ENSDARG00000028982, ENSDARG00000110281 3212 1.809 - - - 0.951 - - 0.858 - - propionyl-CoA carboxylase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-040718-246]
10. ryr1b ENSDARG00000023797 5693 1.796 - - - - - 0.944 0.852 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
11. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 1.794 - - - - - 0.905 0.889 - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
12. mef2ca ENSDARG00000029764 18547 1.788 - - - 0.845 - 0.943 - - - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
13. txn2 ENSDARG00000034777 4071 1.787 - - - - - 0.905 0.882 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
14. prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 1.786 - - 0.845 - - - 0.941 - - peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
15. cct3 ENSDARG00000016173 15869 1.785 - - - 0.886 - - 0.899 - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
16. prep ENSDARG00000057151 3016 1.777 - - 0.839 0.938 - - - - - prolyl endopeptidase [Source:ZFIN;Acc:ZDB-GENE-050522-14]
17. casq1b ENSDARG00000018105 2643 1.776 - - - - - 0.922 0.854 - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
18. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.775 - - - - - 0.902 0.873 - - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
19. serpinf1 ENSDARG00000069048 2083 1.769 - - - - - 0.878 0.891 - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
20. aldh4a1 ENSDARG00000038207 4639 1.762 - - 0.821 0.941 - - - - - aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
21. mdh2 ENSDARG00000043371 14485 1.761 - 0.811 - - - - 0.950 - - malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
22. cyc1 ENSDARG00000038075 16699 1.753 - - 0.877 - - - 0.876 - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
23. stip1 ENSDARG00000004906 7742 1.748 - - - 0.954 - - 0.794 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
24. chrnd ENSDARG00000019342 2728 1.748 - - - - - 0.898 0.850 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
25. stxbp3 ENSDARG00000008142 2604 1.746 - - - - - 0.890 0.856 - - syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
26. actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 6499 1.746 - - - - - 0.913 0.833 - - actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]
27. ptp4a1 ENSDARG00000006242 10267 1.742 - - - 0.916 - - 0.826 - - protein tyrosine phosphatase type IVA, member 1 [Source:ZFIN;Acc:ZDB-GENE-041121-11]
28. rac1 rac1 7341 1.742 - - - 0.932 - - 0.810 - -
29. CR354540.2 ENSDARG00000117517 18452 1.738 - 0.874 - - - - 0.864 - -
30. rps6kb1b ENSDARG00000058230, ENSDARG00000115202 2565 1.733 - - - - - 0.881 0.852 - - ribosomal protein S6 kinase b, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2038]
31. ndufa11 ENSDARG00000042777 2757 1.732 - - - - - 0.903 0.829 - - NADH:ubiquinone oxidoreductase subunit A11 [Source:ZFIN;Acc:ZDB-GENE-040426-1631]
32. atpif1a 6030 1.73 - - 0.858 - - - 0.872 - - ATPase inhibitory factor 1a
33. si:ch73-375g18.1 ENSDARG00000075024 2431 1.721 - - 0.844 - - 0.877 - - - si:ch73-375g18.1 [Source:ZFIN;Acc:ZDB-GENE-110408-56]
34. usp28 ENSDARG00000008880 1850 1.72 - - - - - 0.898 0.822 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
35. BX324201.1 BX324201.1 3302 1.716 - - - - - 0.879 0.837 - -
36. sh3bgr ENSDARG00000021633 3498 1.71 - - 0.811 - - - 0.899 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
37. ndufb11 ENSDARG00000043467 7495 1.703 - - 0.783 - - - 0.920 - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
38. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.695 - - - - 0.767 - 0.928 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
39. znf106a ENSDARG00000016651 6049 1.695 - - 0.823 - - - 0.872 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
40. ndufv1 ENSDARG00000036438 8437 1.685 - - - 0.970 - - 0.715 - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:ZFIN;Acc:ZDB-GENE-040808-73]
41. sdhdb ENSDARG00000030139 9761 1.682 - - - 0.959 - - 0.723 - - succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
42. pes ENSDARG00000018902 3286 1.676 - - 0.795 - - 0.881 - - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
43. nudt3a ENSDARG00000016256 2713 1.673 - - 0.851 - - - 0.822 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
44. ndufv2 ENSDARG00000013044 3758 1.671 - - - - - 0.891 0.780 - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:ZFIN;Acc:ZDB-GENE-040426-1713]
45. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 1.671 - - 0.794 - - - 0.877 - - aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]
46. capza1b ENSDARG00000056090, ENSDARG00000109842, ENSDARG00000110402 12199 1.664 - - 0.770 - - - 0.894 - - capping actin protein of muscle Z-line subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-031002-24]
47. hdac9b ENSDARG00000056642 1148 1.66 - - - - - 0.874 0.786 - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
48. atp5f1 16797 1.653 - - - - - 0.900 0.753 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
49. arih2 ENSDARG00000012848 7087 1.65 - - 0.722 0.928 - - - - - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
50. psmb4 ENSDARG00000054696 8100 1.643 - - - - - 0.901 0.742 - - proteasome subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333]
51. tnw 16679 1.643 - - 0.781 - - - 0.862 - - tenascin W, transcript variant X2
52. ddx49 ENSDARG00000012899 1604 1.643 - - 0.859 - - - 0.784 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
53. KIAA0355 3250 1.636 - - 0.833 - - - 0.803 - - KIAA0355 ortholog, transcript variant X1
54. aamp ENSDARG00000045019 2818 1.635 - - - 0.935 - - 0.700 - - angio-associated, migratory cell protein [Source:ZFIN;Acc:ZDB-GENE-040426-2370]
55. pdhb ENSDARG00000021346 9088 1.634 - - - - - 0.929 0.705 - - pyruvate dehydrogenase E1 beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2173]
56. dctn2 ENSDARG00000031388 3825 1.63 - 0.794 0.836 - - - - - - dynactin 2 (p50) [Source:ZFIN;Acc:ZDB-GENE-040426-1279]
57. PSIP1 PSIP1 5252 1.628 - - - - - 0.911 0.717 - -
58. ociad1 ENSDARG00000052334 2797 1.625 - - - - - 0.895 0.730 - - OCIA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1100]
59. ube2a ENSDARG00000098466 12765 1.623 - - 0.745 - - - 0.878 - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
60. tgm2a ENSDARG00000070157 4516 1.622 - 0.796 - - - - 0.826 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
61. SPEG SPEG 4017 1.618 - 0.798 - - - - 0.820 - -
62. tmem182 tmem182 12589 1.617 - - - - 0.730 - 0.887 - -
63. cct4 ENSDARG00000013475 23959 1.615 - - - - - 0.906 0.709 - - chaperonin containing TCP1, subunit 4 (delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1421]
64. tmem189 ENSDARG00000042732 4004 1.611 - 0.781 0.830 - - - - - - transmembrane protein 189 [Source:ZFIN;Acc:ZDB-GENE-041010-150]
65. rpl37 ENSDARG00000034291, ENSDARG00000076360 13668 1.609 - 0.737 - - - - 0.872 - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
66. hnrpdl 14288 1.608 - - 0.831 - - 0.777 - - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
67. abce1 ENSDARG00000007216 7502 1.606 - 0.756 - - - - 0.850 - - ATP-binding cassette, sub-family E (OABP), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1995]
68. PITPNC1 ENSDARG00000099260 1096 1.602 - 0.798 - - - - 0.804 - - phosphatidylinositol transfer protein cytoplasmic 1 [Source:HGNC Symbol;Acc:HGNC:21045]
69. COLGALT1 ENSDARG00000073974 5069 1.597 - 0.789 0.808 - - - - - - collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
70. pomp ENSDARG00000032296 4439 1.595 - - 0.781 - - - 0.814 - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
71. sf3a3 ENSDARG00000100114 4511 1.594 - - 0.806 - - - 0.788 - - splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
72. adh5 ENSDARG00000080010, ENSDARG00000111574 4980 1.593 - - 0.851 - - - 0.742 - - alcohol dehydrogenase 5 [Source:ZFIN;Acc:ZDB-GENE-011003-1]
73. MRPL55 MRPL55 1711 1.589 - - 0.852 - - - 0.737 - -
74. mrpl45 ENSDARG00000044942, ENSDARG00000114416, ENSDARG00000115767 1599 1.586 - - 0.869 - - - 0.717 - - mitochondrial ribosomal protein L45 [Source:ZFIN;Acc:ZDB-GENE-040426-1041]
75. mcts1 ENSDARG00000025972 4662 1.583 - - - - - 0.874 0.709 - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
76. myom1a ENSDARG00000061249 10230 1.583 - - - - 0.702 - 0.881 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
77. plagx ENSDARG00000036855 3768 1.571 - - - - - 0.870 0.701 - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
78. qars ENSDARG00000010316 2715 1.561 - - 0.853 - - - 0.708 - - glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
79. camk2g1 ENSDARG00000071395 10456 1.556 - 0.748 - - - 0.808 - - - calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma 1 [Source:ZFIN;Acc:ZDB-GENE-050913-146]
80. npepps ENSDARG00000044943, ENSDARG00000110180, ENSDARG00000116096 3572 1.554 - - 0.847 - - - 0.707 - - aminopeptidase puromycin sensitive [Source:ZFIN;Acc:ZDB-GENE-060524-3]
81. pdss2 ENSDARG00000012563 984 1.552 - - 0.848 - - - 0.704 - - prenyl (decaprenyl) diphosphate synthase, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040718-43]
82. nxf1 ENSDARG00000055076 3251 1.55 - - 0.808 - - - 0.742 - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
83. pgm5 ENSDARG00000060745, ENSDARG00000114684 1083 1.548 - 0.797 - - - - 0.751 - - phosphoglucomutase 5 [Source:ZFIN;Acc:ZDB-GENE-060503-838]
84. ube2v2 ENSDARG00000028198 23341 1.533 - - 0.800 - - - 0.733 - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
85. coe2 coe2 1633 1.529 - - 0.816 - - - 0.713 - -
86. plecb ENSDARG00000021987 13621 1.521 - - 0.784 - 0.737 - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
87. BX005368.2 BX005368.2 702 1.518 - 0.798 - - - - 0.720 - -
88. cct6a ENSDARG00000021252 33641 1.488 - - - 0.772 - - 0.716 - - chaperonin containing TCP1, subunit 6A (zeta 1) [Source:ZFIN;Acc:ZDB-GENE-011018-2]
89. eif3f ENSDARG00000077533 24387 1.488 - 0.753 - - - - 0.735 - - eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
90. eif3ea ENSDARG00000090697 14670 1.483 - - 0.718 - - - 0.765 - - eukaryotic translation initiation factor 3, subunit E, a [Source:ZFIN;Acc:ZDB-GENE-030131-3827]
91. rpl5a ENSDARG00000020197 35209 1.47 - - 0.731 - - 0.739 - - - ribosomal protein L5a [Source:ZFIN;Acc:ZDB-GENE-030131-5161]
92. Sep-02 Sep-02 10074 1.439 - - - - 0.710 - 0.729 - -
93. myoz1a ENSDARG00000056209, ENSDARG00000115885 3668 0.965 - - - - - 0.965 - - - myozenin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1875]
94. eif2s1b ENSDARG00000052178 11961 0.961 - - - - - - 0.961 - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
95. eif4a1b ENSDARG00000003032, ENSDARG00000116907 14301 0.96 - - - 0.960 - - - - - eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
96. hrsp12 3981 0.953 - - - 0.953 - - - - - heat-responsive protein 12, transcript variant 1
97. bcar1 ENSDARG00000056525 6563 0.952 - - - 0.952 - - - - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
98. slc24a4a ENSDARG00000015425 1464 0.951 - - - 0.951 - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-050417-291]
99. chmp2bb ENSDARG00000002190 4629 0.951 - - - 0.951 - - - - - charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
100. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 0.951 - - - - - - 0.951 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]

There are 1509 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA