Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mt-nd4

Gene Name Gene ID Reads Annotation
mt-nd4 ENSDARG00000063917 481351 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]










Genes with expression patterns similar to mt-nd4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mt-nd4 ENSDARG00000063917 481351 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
2. tmem38a ENSDARG00000024047 41883 2.195 - - - - - 0.702 0.746 - 0.747 transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
3. nme2b.2 ENSDARG00000099420 70588 1.77 0.859 - - - - - 0.911 - - NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
4. mt-nd2 ENSDARG00000063899 553982 1.647 0.708 - - - - - - 0.939 - NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
5. ldb3b ENSDARG00000099974 33615 1.6 0.750 - - - - - - 0.850 - LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
6. dldh ENSDARG00000008785 15202 1.574 0.853 0.721 - - - - - - - dihydrolipoamide dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040120-4]
7. rps6 ENSDARG00000019778 87546 1.453 0.725 0.728 - - - - - - - ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
8. ppp3cca ENSDARG00000014962, ENSDARG00000112030 1301 1.417 - 0.717 - - - - - 0.700 - protein phosphatase 3, catalytic subunit, gamma isozyme, a [Source:ZFIN;Acc:ZDB-GENE-030829-36]
9. rpsa ENSDARG00000019181 93440 0.902 - 0.902 - - - - - - - ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
10. cdkn3 ENSDARG00000039130 1051 0.885 - - - - - - - 0.885 - cyclin-dependent kinase inhibitor 3 [Source:ZFIN;Acc:ZDB-GENE-060427-2]
11. SSX2IP SSX2IP 316 0.884 - - - - - - - 0.884 -
12. got2a ENSDARG00000041068, ENSDARG00000114282 693 0.879 - - - - - - - 0.879 - glutamic-oxaloacetic transaminase 2a, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-2703]
13. FGL1 ENSDARG00000105380 147 0.878 - - - - - - - 0.878 - fibrinogen-like 1 [Source:ZFIN;Acc:ZDB-GENE-130815-1]
14. polm ENSDARG00000103470 49 0.876 - - - - - - - 0.876 - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
15. dhrs7c dhrs7c 1173 0.875 - - - - - - - 0.875 -
16. mir133a-1 77 0.873 - - - - - - - 0.873 - microRNA 133a-1
17. mamdc1 mamdc1 156 0.873 - - - - - - - 0.873 -
18. zgc:112146 ENSDARG00000104829 34 0.873 - - - - - - - 0.873 - zgc:112146 [Source:ZFIN;Acc:ZDB-GENE-050417-237]
19. slco4a1 ENSDARG00000075948 74 0.872 - - - - - - - 0.872 - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
20. dhrs3a ENSDARG00000044982, ENSDARG00000109521 146 0.871 - - - - - - - 0.871 - dehydrogenase/reductase (SDR family) member 3a [Source:ZFIN;Acc:ZDB-GENE-040801-217]
21. C4H12orf5 C4H12orf5 158 0.87 - - - - - - - 0.870 -
22. mir301c 84 0.87 - - - - - - - 0.870 - microRNA 301c
23. hfe2 4113 0.869 - - - - - - - 0.869 - hemochromatosis type 2
24. nebl ENSDARG00000021200 40 0.866 - - - - - - - 0.866 - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
25. si:ch211-53m15.1 si:ch211-53m15.1 28 0.866 - - - - - - - 0.866 -
26. nrg2b ENSDARG00000086585 100 0.866 - - - - - - - 0.866 - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
27. CABZ01072534.1 CABZ01072534.1 69 0.866 - - - - - - - 0.866 -
28. CCDC141 ENSDARG00000095675 94 0.865 - - - - - - - 0.865 - coiled-coil domain containing 141 [Source:ZFIN;Acc:ZDB-GENE-081104-472]
29. htr3a ENSDARG00000089212 51 0.865 - - - - - - - 0.865 - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
30. styxl1 ENSDARG00000026338 29 0.865 - - - - - - - 0.865 - serine/threonine/tyrosine interacting-like 1 [Source:ZFIN;Acc:ZDB-GENE-040912-45]
31. si:ch211-238g23.1 ENSDARG00000055746 23 0.865 - - - - - - - 0.865 - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
32. si:dkey-85k15.11 ENSDARG00000090817 20 0.864 - - - - - - - 0.864 - si:dkey-85k15.11 [Source:ZFIN;Acc:ZDB-GENE-100922-4]
33. BX649448.1 ENSDARG00000079441 65 0.864 - - - - - - - 0.864 -
34. CSMD3 CSMD3 0 0.864 - - - - - - - 0.864 -
35. flt3 ENSDARG00000058503 32 0.864 - - - - - - - 0.864 - fms-related tyrosine kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050114-4]
36. si:ch211-64i20.3 ENSDARG00000089934, ENSDARG00000105063 42 0.864 - - - - - - - 0.864 - si:ch211-64i20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-55]
37. cox5b2 ENSDARG00000068738 182 0.863 - - - - - - - 0.863 - cytochrome c oxidase subunit 5B2 [Source:ZFIN;Acc:ZDB-GENE-060825-71]
38. nr1d2b ENSDARG00000009594 1144 0.863 - - - - - - - 0.863 - nuclear receptor subfamily 1, group D, member 2b [Source:ZFIN;Acc:ZDB-GENE-990415-244]
39. chpfb ENSDARG00000078037 30 0.862 - - - - - - - 0.862 - chondroitin polymerizing factor b [Source:ZFIN;Acc:ZDB-GENE-100504-1]
40. tatdn3 ENSDARG00000054076 130 0.862 - - - - - - - 0.862 - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
41. BX004880.2 BX004880.2 83 0.862 - - - - - - - 0.862 -
42. MVD MVD 32 0.861 - - - - - - - 0.861 -
43. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 0.86 - - - - - - - 0.860 - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
44. NDUFB1 ENSDARG00000087456 8270 0.86 - - - - - - - 0.860 - NADH:ubiquinone oxidoreductase subunit B1 [Source:HGNC Symbol;Acc:HGNC:7695]
45. ZNF337_15 ZNF337_15 135 0.858 - - - - - - - 0.858 -
46. si:rp71-36a1.2 ENSDARG00000093686 81 0.858 - - - - - - - 0.858 - si:rp71-36a1.2 [Source:ZFIN;Acc:ZDB-GENE-050208-646]
47. nrd1 nrd1 324 0.857 - - - - - - - 0.857 -
48. CABZ01006828.1 CABZ01006828.1 410 0.857 - - - - - - - 0.857 -
49. zgc:110224 ENSDARG00000032263 147 0.857 - - - - - - - 0.857 - zgc:110224 [Source:ZFIN;Acc:ZDB-GENE-050417-120]
50. elnb ENSDARG00000069017 744 0.856 - - - - - - - 0.856 - elastin b [Source:ZFIN;Acc:ZDB-GENE-061212-2]
51. si:dkeyp-22c6.1 si:dkeyp-22c6.1 71 0.855 - - - - - - - 0.855 -
52. slc17a9b ENSDARG00000011049 231 0.854 - - - - - - - 0.854 - solute carrier family 17 (vesicular nucleotide transporter), member 9b [Source:ZFIN;Acc:ZDB-GENE-040718-380]
53. xirp1 ENSDARG00000030722 1486 0.854 - - - - - - - 0.854 - xin actin binding repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050221-2]
54. si:rp71-1c10.11 ENSDARG00000096721 39 0.853 - - - - - - - 0.853 - si:rp71-1c10.11 [Source:ZFIN;Acc:ZDB-GENE-130603-61]
55. GPR153 ENSDARG00000087601 48 0.853 - - - - - - - 0.853 - G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7]
56. CABZ01117079.1 CABZ01117079.1 123 0.853 - - - - - - - 0.853 -
57. slc5a6 slc5a6 224 0.853 - - - - - - - 0.853 -
58. si:ch211-207m11.2 si:ch211-207m11.2 63 0.853 - - - - - - - 0.853 -
59. parla ENSDARG00000039310 360 0.852 - - - - - - - 0.852 - presenilin associated, rhomboid-like a [Source:ZFIN;Acc:ZDB-GENE-050327-8]
60. btbd3b ENSDARG00000087517 107 0.852 - - - - - - - 0.852 - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
61. si:ch211-71m22.1 ENSDARG00000058638 169 0.851 - - - - - - - 0.851 - si:ch211-71m22.1 [Source:ZFIN;Acc:ZDB-GENE-070705-193]
62. gnb5b ENSDARG00000055377 98 0.849 - - - - - - - 0.849 - guanine nucleotide binding protein (G protein), beta 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1712]
63. trpc1 ENSDARG00000061203 62 0.849 - - - - - - - 0.849 - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
64. ZNF337_6 ZNF337_6 898 0.849 - - - - - - - 0.849 -
65. si:dkey-50i6.5 ENSDARG00000101320 95 0.849 - - - - - - - 0.849 - si:dkey-50i6.5 [Source:ZFIN;Acc:ZDB-GENE-081031-53]
66. CABZ01086041.1 ENSDARG00000019442 472 0.847 - - - - - - - 0.847 - angiomotin like 1 [Source:NCBI gene;Acc:101884950]
67. BX664721.5 BX664721.5 462 0.846 - - - - - - - 0.846 -
68. avpr2ab ENSDARG00000029219 97 0.846 - - - - - - - 0.846 - arginine vasopressin receptor 2a, duplicate b [Source:ZFIN;Acc:ZDB-GENE-110411-48]
69. cbx8a_1 ENSDARG00000087327 109 0.845 - - - - - - - 0.845 - chromobox homolog 8a (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040405-1]
70. klf11b ENSDARG00000013794 646 0.843 - - - - - - - 0.843 - Kruppel-like factor 11b [Source:ZFIN;Acc:ZDB-GENE-061103-82]
71. si:ch1073-357b18.4 ENSDARG00000096602 121 0.841 - - - - - - - 0.841 - si:ch1073-357b18.4 [Source:ZFIN;Acc:ZDB-GENE-121214-213]
72. BX640398.1 ENSDARG00000097190 219 0.841 - - - - - - - 0.841 -
73. dennd1b ENSDARG00000101868 328 0.84 - - - - - - - 0.840 - DENN/MADD domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060503-16]
74. tnnc1b ENSDARG00000037539 13945 0.84 0.840 - - - - - - - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
75. CASS4 ENSDARG00000006775 760 0.839 - - - - - - - 0.839 - Cas scaffold protein family member 4 [Source:ZFIN;Acc:ZDB-GENE-110131-9]
76. smim8 ENSDARG00000071040 622 0.839 - - - - - - - 0.839 - small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
77. b3gnt5a ENSDARG00000018971 938 0.839 - - - - - - - 0.839 - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-030131-8470]
78. ubox5 ENSDARG00000058563 161 0.839 - - - - - - - 0.839 - U-box domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-110411-166]
79. thyn1 ENSDARG00000042659, ENSDARG00000113223 459 0.838 - - - - - - - 0.838 - thymocyte nuclear protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1585]
80. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 0.838 - - - - - 0.838 - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
81. scp2a ENSDARG00000012194 614 0.837 - - - - - - - 0.837 - sterol carrier protein 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1846]
82. cacna2d3 ENSDARG00000078760 211 0.836 - - - - - - - 0.836 - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
83. si:dkey-122c11.9 si:dkey-122c11.9 227 0.833 - - - - - - - 0.833 -
84. rpl3 ENSDARG00000003599 797 0.833 - - - - - - - 0.833 - ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-1291]
85. slc39a1 ENSDARG00000058257, ENSDARG00000112079 293 0.833 - - - - - - - 0.833 - solute carrier family 39 (zinc transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9917]
86. rps20 ENSDARG00000036044 121457 0.832 0.832 - - - - - - - - ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
87. CABZ01044943.1 CABZ01044943.1 309 0.831 - - - - - - - 0.831 -
88. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 0.831 - - - - - - - 0.831 - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
89. zgc:173575 ENSDARG00000078281, ENSDARG00000115456 190 0.83 - - - - - - - 0.830 - zgc:173575 [Source:ZFIN;Acc:ZDB-GENE-080218-25]
90. tagln ENSDARG00000045408 48 0.828 - - - - - - - 0.828 - transgelin [Source:ZFIN;Acc:ZDB-GENE-070912-1]
91. si:dkeyp-19e1.3 ENSDARG00000051836 531 0.825 - - - - - - - 0.825 - si:dkeyp-19e1.3 [Source:ZFIN;Acc:ZDB-GENE-081104-56]
92. sema4ba ENSDARG00000074414 1194 0.824 - - - - - - - 0.824 - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba [Source:ZFIN;Acc:ZDB-GENE-070705-31]
93. ttll12 ENSDARG00000103537 364 0.824 - - - - - - - 0.824 - tubulin tyrosine ligase-like family, member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-697]
94. prmt7 ENSDARG00000051902, ENSDARG00000113277, ENSDARG00000116251 440 0.824 - - - - - - - 0.824 - protein arginine methyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1560]
95. matn3a ENSDARG00000069245 2410 0.824 - - - - - - - 0.824 - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
96. arg2 ENSDARG00000039269 571 0.824 - - - - - - - 0.824 - arginase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1334]
97. mrps2 ENSDARG00000103198 2410 0.823 - - - - - - - 0.823 - mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
98. C5H12orf49 C5H12orf49 681 0.821 - - - - - - - 0.821 -
99. col17a1b ENSDARG00000079011 143 0.82 - - - - - - - 0.820 - collagen, type XVII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7145]
100. CU638714.1 ENSDARG00000100303 2132 0.819 - - - - - - - 0.819 -

There are 204 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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