Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mt-nd3

Gene Name Gene ID Reads Annotation
mt-nd3 ENSDARG00000063914 62872 NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]










Genes with expression patterns similar to mt-nd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mt-nd3 ENSDARG00000063914 62872 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
2. atp2a1l ENSDARG00000035458 6222 1.674 - - - - - 0.820 0.854 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, like [Source:ZFIN;Acc:ZDB-GENE-041229-2]
3. rpl39 ENSDARG00000036316, ENSDARG00000117167 80631 1.668 0.743 - - - - - 0.925 - - ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
4. rps13 ENSDARG00000036298, ENSDARG00000112818 58520 1.609 0.701 - - - - - 0.908 - - ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
5. rps15a ENSDARG00000010160 94499 1.577 0.806 - 0.771 - - - - - - ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
6. rps29 ENSDARG00000041232 71334 1.571 0.834 - 0.737 - - - - - - ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
7. rps26 ENSDARG00000037071 40061 1.568 - - 0.783 - - - - - 0.785 ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-030131-8606]
8. rpl10a ENSDARG00000042905, ENSDARG00000115649 202994 1.546 0.753 - - - - - 0.793 - - ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
9. smyd2b ENSDARG00000005629 8181 1.517 0.709 - - - - - 0.808 - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
10. aldoaa ENSDARG00000011665 56184 1.459 0.744 - - - - 0.715 - - - aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
11. rpsa ENSDARG00000019181 93440 0.948 - - - - - - 0.948 - - ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
12. rpl35 ENSDARG00000018334 69583 0.947 - - - - - - 0.947 - - ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
13. tnni2b.1 ENSDARG00000035958 51597 0.943 - - - - - - 0.943 - - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
14. rtn4a ENSDARG00000044601, ENSDARG00000112237 24526 0.894 - - - - - - 0.894 - - reticulon 4a [Source:ZFIN;Acc:ZDB-GENE-030710-1]
15. tpm2 ENSDARG00000104682 36853 0.881 - - - - - - - - 0.881 tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
16. smarca5 ENSDARG00000052348 15433 0.865 - - - 0.865 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
17. tnni1al 8272 0.863 - - - - - - 0.863 - - troponin I, skeletal, slow like, transcript variant X1
18. cirbp cirbp 88363 0.855 - - - - - - 0.855 - -
19. rps23 ENSDARG00000021838 145026 0.853 - - - - - - 0.853 - - ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
20. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 0.851 - - - - - - 0.851 - - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
21. mybpc3 ENSDARG00000011615 7271 0.849 - - - - - - 0.849 - - myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
22. rpl4 ENSDARG00000041182 18655 0.845 - - - - - - 0.845 - - ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
23. ahnak ENSDARG00000061764 25962 0.842 - - - - - - - - 0.842 AHNAK nucleoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-8719]
24. rpl17 ENSDARG00000057556 60281 0.838 0.838 - - - - - - - - ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
25. Sep-02 Sep-02 10074 0.836 - - - - - - - - 0.836
26. ube2a ENSDARG00000098466 12765 0.836 - - - - - - - - 0.836 ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
27. col11a1a ENSDARG00000026165, ENSDARG00000115341 43138 0.835 - - - - - - 0.835 - - collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]
28. psmc6 ENSDARG00000037038, ENSDARG00000111223, ENSDARG00000114650 25449 0.834 - - - - - - 0.834 - - proteasome 26S subunit, ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-304]
29. RPL37A RPL37A 62256 0.831 0.831 - - - - - - - -
30. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 0.827 - - - - - - - - 0.827 GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
31. atp1b1b ENSDARG00000076833 10324 0.826 - - - - - - - - 0.826 ATPase Na+/K+ transporting subunit beta 1b [Source:ZFIN;Acc:ZDB-GENE-001127-4]
32. glulb ENSDARG00000100003, ENSDARG00000113742 19292 0.826 - - - - - - 0.826 - - glutamate-ammonia ligase (glutamine synthase) b [Source:ZFIN;Acc:ZDB-GENE-030131-8417]
33. rac1 rac1 7341 0.824 - - - - - - - - 0.824
34. blcap ENSDARG00000052073 8646 0.823 - - - - - - - - 0.823 bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
35. rps6 ENSDARG00000019778 87546 0.823 - - - - - - - - 0.823 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
36. prkab1b ENSDARG00000046143 8640 0.823 - - - - - - - - 0.823 protein kinase, AMP-activated, beta 1 non-catalytic subunit, b [Source:ZFIN;Acc:ZDB-GENE-030131-7172]
37. lasp1 ENSDARG00000057867 18721 0.823 - - - - - - - - 0.823 LIM and SH3 protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1936]
38. rpl22l1 ENSDARG00000010244 36262 0.822 - - - - - - - - 0.822 ribosomal protein L22-like 1 [Source:ZFIN;Acc:ZDB-GENE-060804-3]
39. si:ch1073-286c18.5 ENSDARG00000098567 7391 0.821 - - - - - - - - 0.821 si:ch1073-286c18.5 [Source:ZFIN;Acc:ZDB-GENE-121214-240]
40. ndufa7 ENSDARG00000036684 6051 0.821 - - - - - - - - 0.821 NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
41. hspe1 ENSDARG00000056167 21636 0.821 - - - - - - 0.821 - - heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2]
42. add1 ENSDARG00000103962 4938 0.82 - - - - - - - - 0.820 adducin 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-030909-2]
43. rbm24b ENSDARG00000031809, ENSDARG00000110167 2404 0.819 - - - - - - - - 0.819 RNA binding motif protein 24b [Source:ZFIN;Acc:ZDB-GENE-060312-43]
44. fbxw11a ENSDARG00000104806 1815 0.819 - - - - - - - - 0.819 F-box and WD repeat domain containing 11a [Source:ZFIN;Acc:ZDB-GENE-030131-6305]
45. si:ch211-152c2.3 ENSDARG00000045898 3448 0.819 - - - - - - - - 0.819 si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
46. echs1 ENSDARG00000001578 3733 0.817 - - - - - - - - 0.817 enoyl CoA hydratase, short chain, 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-617]
47. syncrip ENSDARG00000040184 24690 0.816 - - - - - - 0.816 - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
48. rab14 ENSDARG00000074246 4084 0.816 - - - - - - - - 0.816 RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
49. glrx3 ENSDARG00000098785 4138 0.815 - - - - - - - - 0.815 glutaredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-22]
50. gnl3l ENSDARG00000020595, ENSDARG00000109309 3582 0.815 - - - - - - - - 0.815 guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]
51. sdprb sdprb 13647 0.815 - - - - - - 0.815 - -
52. rhag ENSDARG00000019253 2974 0.815 - - - - - - - - 0.815 Rh associated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-8229]
53. gstp1 ENSDARG00000104068 12698 0.815 - - - - - - - - 0.815 glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
54. taok2b_1 ENSDARG00000100620 2082 0.814 - - - - - - - - 0.814 TAO kinase 2b [Source:ZFIN;Acc:ZDB-GENE-110603-3]
55. iars2 ENSDARG00000044134 1990 0.813 - - - - - - - - 0.813 isoleucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-608]
56. vbp1 ENSDARG00000030241 10619 0.813 - - - - - - 0.813 - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
57. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 0.813 - - - - - - - - 0.813 chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
58. tulp4 tulp4 1520 0.812 - - - - - - - - 0.812
59. znf410 ENSDARG00000008218 1807 0.812 - - - - - - - - 0.812 zinc finger protein 410 [Source:ZFIN;Acc:ZDB-GENE-040426-1817]
60. rnd1 rnd1 1086 0.812 - - - - - - - - 0.812
61. C3H16orf72 C3H16orf72 2059 0.812 - - - - - - - - 0.812
62. fbxo18 ENSDARG00000062983, ENSDARG00000113423 1458 0.812 - - - - - - - - 0.812 F-box protein helicase 1 [Source:ZFIN;Acc:ZDB-GENE-041210-99]
63. oxnad1 ENSDARG00000062664 2684 0.812 - - - - - - - - 0.812 oxidoreductase NAD-binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-199]
64. FAM210B ENSDARG00000052638 1755 0.812 - - - - - - - - 0.812 family with sequence similarity 210, member B [Source:ZFIN;Acc:ZDB-GENE-050913-122]
65. RPL29 ENSDARG00000077717 88791 0.811 0.811 - - - - - - - - ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
66. smad4 smad4 2519 0.811 - - - - - - - - 0.811
67. KCNAB1 KCNAB1 918 0.811 - - - - - - - - 0.811
68. sfi1 ENSDARG00000053992 1075 0.811 - - - - - - - - 0.811 SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
69. CCDC150 CCDC150 991 0.811 - - - - - - - - 0.811
70. haus1 ENSDARG00000058968 1336 0.811 - - - - - - - - 0.811 HAUS augmin-like complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-091204-387]
71. stat5.1 stat5.1 3337 0.811 - - - - - - - - 0.811
72. selt2 12741 0.81 - - - - - - 0.810 - - selenoprotein T, 2
73. rpl21 ENSDARG00000010516, ENSDARG00000110263 152264 0.81 - - - - - - 0.810 - - ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
74. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 0.81 - - - - - - - - 0.810 aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
75. zmiz1a ENSDARG00000074502 3920 0.81 - - - - - - - - 0.810 zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
76. rbm39a ENSDARG00000011613 4520 0.809 - - - - - - - - 0.809 RNA binding motif protein 39a [Source:ZFIN;Acc:ZDB-GENE-040426-2852]
77. arhgef12b ENSDARG00000100913 1358 0.809 - - - - - - - - 0.809 Rho guanine nucleotide exchange factor (GEF) 12b [Source:ZFIN;Acc:ZDB-GENE-070705-36]
78. msxd msxd 1750 0.808 - - - - - - - - 0.808
79. smarce1 ENSDARG00000016871 9628 0.807 - - - - - - - - 0.807 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
80. c1galt1b ENSDARG00000055561, ENSDARG00000113870 1795 0.807 - - - - - - - - 0.807 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9075]
81. msna ENSDARG00000058128, ENSDARG00000114614 23727 0.807 - - - - - - - - 0.807 moesin a [Source:ZFIN;Acc:ZDB-GENE-021211-2]
82. cox7c ENSDARG00000104537 12169 0.807 0.807 - - - - - - - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
83. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 0.805 - - - - - - 0.805 - - serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
84. kpnb1 ENSDARG00000104889 9282 0.805 - - - - - - 0.805 - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
85. sdhdb ENSDARG00000030139 9761 0.805 0.805 - - - - - - - - succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
86. lgals1l1 ENSDARG00000088711 4515 0.804 - - - - - - - - 0.804 lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4905]
87. HMGXB4_1 HMGXB4_1 1122 0.804 - - - - - - - - 0.804
88. psmb1 ENSDARG00000009640 8628 0.803 - - - - - - 0.803 - - proteasome subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2]
89. tuba1b ENSDARG00000045367 8485 0.803 - - - - - - - - 0.803 tubulin, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030822-1]
90. ENDOD1_5 ENDOD1_5 8723 0.803 - - - - - - - - 0.803
91. si:dkeyp-13a3.7 si:dkeyp-13a3.7 3422 0.802 - - - - - - 0.802 - -
92. SSBP4 ENSDARG00000056483 5156 0.802 - - - - - - - - 0.802 single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
93. klf11a ENSDARG00000030844 3972 0.801 - - - - - - 0.801 - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
94. snrpb ENSDARG00000011125 11729 0.801 - - - - - - - - 0.801 small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
95. rhoad rhoad 8007 0.8 - - - - - - 0.800 - -
96. uqcrc1 ENSDARG00000052304, ENSDARG00000110068 13973 0.799 - - - - - 0.799 - - - ubiquinol-cytochrome c reductase core protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1792]
97. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 0.799 - - - - - - 0.799 - - sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
98. fam133b ENSDARG00000013863 5070 0.798 - - - - - - 0.798 - - family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
99. CR548630.1 CR548630.1 3301 0.796 - - - - - - 0.796 - -
100. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 0.796 - - - - - - 0.796 - - protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]

There are 171 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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