Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mt-nd2

Gene Name Gene ID Reads Annotation
mt-nd2 ENSDARG00000063899 553982 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]










Genes with expression patterns similar to mt-nd2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mt-nd2 ENSDARG00000063899 553982 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
2. ckmb ENSDARG00000040565 505935 3.1 0.875 - - - 0.762 - 0.759 - 0.704 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
3. tmem38a ENSDARG00000024047 41883 2.362 0.740 - - 0.820 0.802 - - - - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
4. ak1 ENSDARG00000001950 26964 2.323 - - - 0.797 0.775 - 0.751 - - adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
5. actc1b ENSDARG00000099197 324665 2.317 0.765 - - 0.767 0.785 - - - - actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
6. ttnb ttnb 73721 2.279 0.796 - - - 0.760 - 0.723 - -
7. tnnt2c ENSDARG00000032242 28801 2.256 0.765 - - 0.731 0.760 - - - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
8. cav3 ENSDARG00000024141 14906 2.243 0.747 - - 0.769 0.727 - - - - caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
9. mt-co3 ENSDARG00000063912 398919 2.237 - - - 0.710 - 0.736 0.791 - - cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
10. myl10 ENSDARG00000062592 101207 2.231 0.766 - 0.722 - - - - - 0.743 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
11. pgam2 ENSDARG00000057571 23387 2.219 - - - 0.716 - 0.764 - 0.739 - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
12. myhz2 ENSDARG00000012944 69921 2.199 0.711 - - 0.740 0.748 - - - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
13. desma ENSDARG00000058656 30292 2.192 0.719 - - 0.752 0.721 - - - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
14. mt-nd4 ENSDARG00000063917 481351 1.647 0.708 - - - - - - 0.939 - NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
15. myl1 ENSDARG00000014196 98943 1.636 0.857 - - - 0.779 - - - - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
16. mt-nd1 ENSDARG00000063895 272230 1.594 0.830 - - - 0.764 - - - - NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
17. klhl31 ENSDARG00000039066 13656 1.573 - - - 0.803 0.770 - - - - kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
18. mylz3 ENSDARG00000017441 303597 1.569 0.826 - - - 0.743 - - - - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
19. aldoab ENSDARG00000034470 88942 1.542 0.774 - - - 0.768 - - - - aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
20. acta1b ENSDARG00000055618 195597 1.529 0.738 - - - 0.791 - - - - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
21. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 1.523 0.728 - - - 0.795 - - - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
22. tnni2b.1 ENSDARG00000035958 51597 1.519 0.778 - - - 0.741 - - - - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
23. ldb3b ENSDARG00000099974 33615 1.514 0.707 - - - - - - 0.807 - LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
24. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 1.513 0.789 - - - 0.724 - - - - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
25. myhz1.3 ENSDARG00000067997 155509 1.511 0.776 - - - 0.735 - - - - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
26. ntmt1 ENSDARG00000022399 5779 1.508 - - - 0.728 0.780 - - - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
27. atp2a1 ENSDARG00000020574 291561 1.501 0.747 - - - 0.754 - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
28. ttna ttna 101197 1.495 0.719 - - - 0.776 - - - -
29. casq2 ENSDARG00000008982 21802 1.48 - - - 0.765 0.715 - - - - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
30. tnnt3a ENSDARG00000030270 112506 1.473 0.714 - - - 0.759 - - - - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
31. srl ENSDARG00000104587 11126 1.47 - - - 0.730 0.740 - - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
32. pkmb ENSDARG00000099860 25094 1.461 - - - - - 0.701 0.760 - - pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
33. smyd2b ENSDARG00000005629 8181 1.461 - - - 0.700 0.761 - - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
34. xirp2a ENSDARG00000071113 7113 1.459 - - - 0.756 0.703 - - - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
35. tpma ENSDARG00000033683 752432 1.458 0.753 - - - - - 0.705 - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
36. rp42-pen rp42-pen 3395 1.426 - - - 0.723 0.703 - - - -
37. acta1a ENSDARG00000036371 137508 0.891 0.891 - - - - - - - - actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
38. rps6 ENSDARG00000019778 87546 0.889 0.889 - - - - - - - - ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
39. mt-co2 ENSDARG00000063908 621861 0.881 0.881 - - - - - - - - cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
40. tnnc2 ENSDARG00000070835, ENSDARG00000111155 259313 0.852 0.852 - - - - - - - - troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
41. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 59212 0.85 0.850 - - - - - - - - myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
42. ckma ENSDARG00000035327, ENSDARG00000114671 418792 0.845 0.845 - - - - - - - - creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
43. tnnt3b ENSDARG00000068457 101827 0.831 0.831 - - - - - - - - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
44. atp5g1 51897 0.822 - - - - - - - 0.822 - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
45. METTL21C METTL21C 1717 0.813 - - - 0.813 - - - - -
46. rpl8 ENSDARG00000014867 168995 0.81 0.810 - - - - - - - - ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
47. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 0.807 - - - - - - - 0.807 - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
48. rpl9 ENSDARG00000037350, ENSDARG00000112384 136513 0.806 0.806 - - - - - - - - ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
49. tpm2 ENSDARG00000104682 36853 0.802 0.802 - - - - - - - - tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
50. rpl21 ENSDARG00000010516, ENSDARG00000110263 152264 0.801 0.801 - - - - - - - - ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
51. hsp90aa1.1 ENSDARG00000010478 47784 0.799 0.799 - - - - - - - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
52. rps27a ENSDARG00000032725, ENSDARG00000114059 132883 0.794 0.794 - - - - - - - - ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
53. BX664721.5 BX664721.5 462 0.791 - - - - - - - 0.791 -
54. hfe2 4113 0.791 - - - - - - - 0.791 - hemochromatosis type 2
55. atp5ib 19664 0.79 - - - 0.790 - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Eb
56. si:ch211-226o13.2 84923 0.79 0.790 - - - - - - - - si:ch211-226o13.2
57. rps9 ENSDARG00000011405, ENSDARG00000113248 100731 0.788 0.788 - - - - - - - - ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
58. eif5a ENSDARG00000017235 108602 0.788 0.788 - - - - - - - - eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
59. unc45b ENSDARG00000008433 8298 0.788 - - - 0.788 - - - - - unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
60. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 0.788 - - - - - - - 0.788 - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
61. dhrs7c dhrs7c 1173 0.781 - - - - - - - 0.781 -
62. smyd1a ENSDARG00000009280 1503 0.779 - - - - - - - 0.779 - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
63. znf106a ENSDARG00000016651 6049 0.778 - - - - 0.778 - - - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
64. cdkn3 ENSDARG00000039130 1051 0.777 - - - - - - - 0.777 - cyclin-dependent kinase inhibitor 3 [Source:ZFIN;Acc:ZDB-GENE-060427-2]
65. SSX2IP SSX2IP 316 0.775 - - - - - - - 0.775 -
66. FGL1 ENSDARG00000105380 147 0.772 - - - - - - - 0.772 - fibrinogen-like 1 [Source:ZFIN;Acc:ZDB-GENE-130815-1]
67. tgm2a ENSDARG00000070157 4516 0.771 - - - 0.771 - - - - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
68. adss ENSDARG00000002071 5497 0.771 - - - 0.771 - - - - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
69. CU638714.1 ENSDARG00000100303 2132 0.767 - - - - - - - 0.767 -
70. xirp1 ENSDARG00000030722 1486 0.766 - - - - - - - 0.766 - xin actin binding repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050221-2]
71. got2a ENSDARG00000041068, ENSDARG00000114282 693 0.765 - - - - - - - 0.765 - glutamic-oxaloacetic transaminase 2a, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-2703]
72. sncga ENSDARG00000034423, ENSDARG00000112260 5469 0.756 - - - 0.756 - - - - - synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
73. btf3 ENSDARG00000035400, ENSDARG00000116462 147506 0.756 0.756 - - - - - - - - basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
74. NDUFB1 ENSDARG00000087456 8270 0.756 - - - - - - - 0.756 - NADH:ubiquinone oxidoreductase subunit B1 [Source:HGNC Symbol;Acc:HGNC:7695]
75. dhrs3a ENSDARG00000044982, ENSDARG00000109521 146 0.756 - - - - - - - 0.756 - dehydrogenase/reductase (SDR family) member 3a [Source:ZFIN;Acc:ZDB-GENE-040801-217]
76. nrd1 nrd1 324 0.755 - - - - - - - 0.755 -
77. si:ch211-53m15.1 si:ch211-53m15.1 28 0.754 - - - - - - - 0.754 -
78. htr3a ENSDARG00000089212 51 0.753 - - - - - - - 0.753 - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
79. nebl ENSDARG00000021200 40 0.752 - - - - - - - 0.752 - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
80. rpl34 ENSDARG00000029500 48540 0.751 0.751 - - - - - - - - ribosomal protein L34 [Source:ZFIN;Acc:ZDB-GENE-040426-1033]
81. polm ENSDARG00000103470 49 0.751 - - - - - - - 0.751 - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
82. CABZ01072534.1 CABZ01072534.1 69 0.75 - - - - - - - 0.750 -
83. si:ch211-64i20.3 ENSDARG00000089934, ENSDARG00000105063 42 0.75 - - - - - - - 0.750 - si:ch211-64i20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-55]
84. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 0.75 - - - - - - 0.750 - - slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
85. si:ch211-238g23.1 ENSDARG00000055746 23 0.748 - - - - - - - 0.748 - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
86. BX004880.2 BX004880.2 83 0.748 - - - - - - - 0.748 -
87. chpfb ENSDARG00000078037 30 0.748 - - - - - - - 0.748 - chondroitin polymerizing factor b [Source:ZFIN;Acc:ZDB-GENE-100504-1]
88. si:ch1073-429i10.3 75111 0.748 - 0.748 - - - - - - - si:ch1073-429i10.3, transcript variant X2
89. BX649448.1 ENSDARG00000079441 65 0.748 - - - - - - - 0.748 -
90. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 0.748 - - - 0.748 - - - - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
91. zgc:112146 ENSDARG00000104829 34 0.747 - - - - - - - 0.747 - zgc:112146 [Source:ZFIN;Acc:ZDB-GENE-050417-237]
92. styxl1 ENSDARG00000026338 29 0.747 - - - - - - - 0.747 - serine/threonine/tyrosine interacting-like 1 [Source:ZFIN;Acc:ZDB-GENE-040912-45]
93. cox5b2 ENSDARG00000068738 182 0.747 - - - - - - - 0.747 - cytochrome c oxidase subunit 5B2 [Source:ZFIN;Acc:ZDB-GENE-060825-71]
94. CCDC141 ENSDARG00000095675 94 0.747 - - - - - - - 0.747 - coiled-coil domain containing 141 [Source:ZFIN;Acc:ZDB-GENE-081104-472]
95. flt3 ENSDARG00000058503 32 0.746 - - - - - - - 0.746 - fms-related tyrosine kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050114-4]
96. CSMD3 CSMD3 0 0.746 - - - - - - - 0.746 -
97. smim8 ENSDARG00000071040 622 0.746 - - - - - - - 0.746 - small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
98. si:dkey-85k15.11 ENSDARG00000090817 20 0.746 - - - - - - - 0.746 - si:dkey-85k15.11 [Source:ZFIN;Acc:ZDB-GENE-100922-4]
99. klhl41b ENSDARG00000006757 10762 0.744 - - - - - - - 0.744 - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
100. slc5a6 slc5a6 224 0.744 - - - - - - - 0.744 -

There are 93 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA