Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mt-nd1

Gene Name Gene ID Reads Annotation
mt-nd1 ENSDARG00000063895 272230 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]










Genes with expression patterns similar to mt-nd1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mt-nd1 ENSDARG00000063895 272230 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
2. ckmb ENSDARG00000040565 505935 3.047 0.766 - - - 0.741 0.825 0.715 - - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
3. tnnt3a ENSDARG00000030270 112506 3.003 0.744 0.734 - - 0.755 0.770 - - - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
4. pmp22b ENSDARG00000060457 20406 2.957 0.767 - - - 0.705 0.706 - 0.779 - peripheral myelin protein 22b [Source:ZFIN;Acc:ZDB-GENE-060421-4337]
5. tpm3 ENSDARG00000005162 86049 2.405 0.835 - 0.796 - 0.774 - - - - tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
6. si:ch211-226o13.2 84923 2.372 0.901 - - - - 0.770 0.701 - - si:ch211-226o13.2
7. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 2.332 0.803 - - - 0.721 0.808 - - - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
8. mylz3 ENSDARG00000017441 303597 2.327 0.748 - - - 0.735 0.844 - - - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
9. ttna ttna 101197 2.322 0.794 - - - 0.749 0.779 - - -
10. tnni2b.1 ENSDARG00000035958 51597 2.278 0.775 - - - 0.746 - - 0.757 - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
11. atp2a1 ENSDARG00000020574 291561 2.181 0.731 0.733 - - 0.717 - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
12. ckma ENSDARG00000035327, ENSDARG00000114671 418792 1.596 0.832 - - - - 0.764 - - - creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
13. mt-nd2 ENSDARG00000063899 553982 1.594 0.830 - - - 0.764 - - - - NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
14. myl10 ENSDARG00000062592 101207 1.593 0.881 - - - - - - 0.712 - myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
15. tnnc2 ENSDARG00000070835, ENSDARG00000111155 259313 1.592 0.889 - - - - 0.703 - - - troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
16. actc1b ENSDARG00000099197 324665 1.581 0.795 - - - 0.786 - - - - actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
17. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 1.559 0.792 - - - 0.767 - - - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
18. ak1 ENSDARG00000001950 26964 1.558 0.785 - - - 0.773 - - - - adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
19. ldb3b ENSDARG00000099974 33615 1.542 0.825 - - - - 0.717 - - - LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
20. tmem38a ENSDARG00000024047 41883 1.537 - - - - 0.777 - - 0.760 - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
21. aldoab ENSDARG00000034470 88942 1.527 0.726 - - - 0.801 - - - - aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
22. myhz1.3 ENSDARG00000067997 155509 1.505 0.758 - - - 0.747 - - - - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
23. klhl31 ENSDARG00000039066 13656 1.505 0.804 - - - 0.701 - - - - kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
24. tmod4 ENSDARG00000020890 17436 1.496 - - - - 0.702 0.794 - - - tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
25. tnnt2c ENSDARG00000032242 28801 1.494 - - 0.736 - 0.758 - - - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
26. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 1.486 0.762 - - - - - - 0.724 - slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
27. rpl6 ENSDARG00000058451 82152 1.475 - - - - - 0.760 0.715 - - ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
28. casq2 ENSDARG00000008982 21802 1.452 - - - - 0.706 - - 0.746 - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
29. srl ENSDARG00000104587 11126 1.443 - - - - 0.714 - - 0.729 - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
30. SYNPO2 SYNPO2 7382 1.438 0.729 - - - - 0.709 - - -
31. nme2b.2 ENSDARG00000099420 70588 1.436 0.714 - - - - 0.722 - - - NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
32. txlnbb ENSDARG00000076241 6396 1.435 - - - - 0.714 0.721 - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
33. acta1a ENSDARG00000036371 137508 0.901 0.901 - - - - - - - - actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
34. h1f0 ENSDARG00000038559 39781 0.857 0.857 - - - - - - - - H1 histone family, member 0 [Source:ZFIN;Acc:ZDB-GENE-030131-337]
35. rpl18a ENSDARG00000025073 170983 0.834 0.834 - - - - - - - - ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
36. mt-co2 ENSDARG00000063908 621861 0.82 0.820 - - - - - - - - cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
37. hsp90aa1.1 ENSDARG00000010478 47784 0.809 0.809 - - - - - - - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
38. tpma ENSDARG00000033683 752432 0.801 0.801 - - - - - - - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
39. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 59212 0.796 0.796 - - - - - - - - myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
40. nmrk2 ENSDARG00000067848 10293 0.795 0.795 - - - - - - - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
41. btf3 ENSDARG00000035400, ENSDARG00000116462 147506 0.788 0.788 - - - - - - - - basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
42. tnnt3b ENSDARG00000068457 101827 0.785 0.785 - - - - - - - - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
43. mt-co3 ENSDARG00000063912 398919 0.783 0.783 - - - - - - - - cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
44. tmem182 tmem182 12589 0.773 0.773 - - - - - - - -
45. eif5a ENSDARG00000017235 108602 0.769 0.769 - - - - - - - - eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
46. tnni1al 8272 0.768 - - - - - - - 0.768 - troponin I, skeletal, slow like, transcript variant X1
47. tmem161a ENSDARG00000012790 16094 0.765 - - - - 0.765 - - - - transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
48. mt-cyb ENSDARG00000063924 233778 0.763 - - - - - 0.763 - - - cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
49. ntmt1 ENSDARG00000022399 5779 0.761 - - - - 0.761 - - - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
50. rps27a ENSDARG00000032725, ENSDARG00000114059 132883 0.76 0.760 - - - - - - - - ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
51. mylpfb ENSDARG00000002589 70167 0.756 0.756 - - - - - - - - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
52. tpm2 ENSDARG00000104682 36853 0.754 0.754 - - - - - - - - tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
53. pvalb1 ENSDARG00000037789 121195 0.753 0.753 - - - - - - - - parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
54. rpl11 ENSDARG00000043509 123498 0.748 0.748 - - - - - - - - ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
55. fkbp1aa ENSDARG00000022684 74052 0.748 - 0.748 - - - - - - - FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
56. desma ENSDARG00000058656 30292 0.745 - - - - 0.745 - - - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
57. myl1 ENSDARG00000014196 98943 0.744 - - - - 0.744 - - - - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
58. tnnc1b ENSDARG00000037539 13945 0.744 - - - - 0.744 - - - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
59. adss ENSDARG00000002071 5497 0.742 - - - - 0.742 - - - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
60. cav3 ENSDARG00000024141 14906 0.74 - - - - 0.740 - - - - caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
61. rps13 ENSDARG00000036298, ENSDARG00000112818 58520 0.74 - 0.740 - - - - - - - ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
62. hspb9 ENSDARG00000078674 2755 0.735 0.735 - - - - - - - - heat shock protein, alpha-crystallin-related, 9 [Source:ZFIN;Acc:ZDB-GENE-080214-6]
63. rps17 ENSDARG00000104011 27028 0.735 0.735 - - - - - - - - ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-040426-1852]
64. myhz2 ENSDARG00000012944 69921 0.735 - - - - 0.735 - - - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
65. ryr3 ENSDARG00000071331 6795 0.735 - - - - - 0.735 - - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
66. atp5ib 19664 0.733 - - - - 0.733 - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Eb
67. cfl1 ENSDARG00000021124 78399 0.731 - 0.731 - - - - - - - cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
68. myoz1b ENSDARG00000071445 13381 0.73 - - - - - 0.730 - - - myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
69. smyd2b ENSDARG00000005629 8181 0.729 - - - - 0.729 - - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
70. ttnb ttnb 73721 0.728 - - - - 0.728 - - - -
71. pgam2 ENSDARG00000057571 23387 0.728 - - - - 0.728 - - - - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
72. zgc:92518 ENSDARG00000016343 3837 0.727 - - - - 0.727 - - - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
73. prkg1a ENSDARG00000020656 918 0.726 - - - - - 0.726 - - - protein kinase cGMP-dependent 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1308]
74. nt5dc2 ENSDARG00000059646 3878 0.725 - 0.725 - - - - - - - 5'-nucleotidase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-17]
75. rplp2l ENSDARG00000011201 77026 0.722 0.722 - - - - - - - - ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
76. cd81 cd81 44833 0.721 0.721 - - - - - - - -
77. CABZ01028296.1 CABZ01028296.1 6203 0.721 - 0.721 - - - - - - -
78. pvalb4 ENSDARG00000024433 35736 0.72 - - - - - - - 0.720 - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
79. rp42-pen rp42-pen 3395 0.717 - - - - 0.717 - - - -
80. tnni2a.4 ENSDARG00000029069 122344 0.717 - - - - 0.717 - - - - troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
81. neb ENSDARG00000032630, ENSDARG00000109273 19493 0.715 - - - - 0.715 - - - - nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
82. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 0.712 - 0.712 - - - - - - - nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
83. rps6 ENSDARG00000019778 87546 0.711 - - - - - 0.711 - - - ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
84. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 0.71 - - - - 0.710 - - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
85. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 0.71 - - - - 0.710 - - - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
86. rpl35a ENSDARG00000088030 60686 0.709 0.709 - - - - - - - - ribosomal protein L35a [Source:ZFIN;Acc:ZDB-GENE-040718-190]
87. smtnl1 ENSDARG00000041257 7410 0.709 - 0.709 - - - - - - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
88. zgc:86709 ENSDARG00000110511, ENSDARG00000111417 22785 0.708 - - - - - - - 0.708 - zgc:86709 [Source:ZFIN;Acc:ZDB-GENE-040625-35]
89. nap1l4a ENSDARG00000070560, ENSDARG00000113907 4244 0.704 - - - - 0.704 - - - - nucleosome assembly protein 1-like 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9099]
90. pygma ENSDARG00000055518 15972 0.704 - - - - - - - 0.704 - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
91. rpl22l1 ENSDARG00000010244 36262 0.703 0.703 - - - - - - - - ribosomal protein L22-like 1 [Source:ZFIN;Acc:ZDB-GENE-060804-3]
92. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 0.703 - 0.703 - - - - - - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
93. xirp2a ENSDARG00000071113 7113 0.703 - - - - 0.703 - - - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
94. purbb ENSDARG00000103546 4983 0.702 - - - - 0.702 - - - - purine-rich element binding protein Bb [Source:ZFIN;Acc:ZDB-GENE-040426-1478]
95. cmn ENSDARG00000055527 14039 0.702 - 0.702 - - - - - - - calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]
96. hhatlb ENSDARG00000005139 6674 0.701 - - - - - - - 0.701 - hedgehog acyltransferase like, b [Source:ZFIN;Acc:ZDB-GENE-050506-130]
97. SPEG SPEG 4017 0.701 - - - - 0.701 - - - -
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA