Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mt-co3

Gene Name Gene ID Reads Annotation
mt-co3 ENSDARG00000063912 398919 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]










Genes with expression patterns similar to mt-co3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mt-co3 ENSDARG00000063912 398919 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
2. mt-cyb ENSDARG00000063924 233778 2.34 0.824 - - - - - - 0.803 0.713 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
3. mt-nd2 ENSDARG00000063899 553982 2.237 - - - 0.710 - 0.736 0.791 - - NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
4. tnnc2 ENSDARG00000070835, ENSDARG00000111155 259313 2.218 0.793 - - - 0.725 - - 0.700 - troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
5. mylz3 ENSDARG00000017441 303597 2.21 0.743 0.753 - - - - - 0.714 - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
6. mt-co2 ENSDARG00000063908 621861 2.203 0.731 - - - - 0.710 - 0.762 - cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
7. mt-atp6 ENSDARG00000063911 461280 1.729 - - - - - 0.890 - 0.839 - ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
8. ldb3b ENSDARG00000099974 33615 1.615 0.874 - - - - 0.741 - - - LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
9. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 1.594 0.881 0.713 - - - - - - - slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
10. ttnb ttnb 73721 1.57 0.727 - - - - - 0.843 - -
11. tnnt3a ENSDARG00000030270 112506 1.551 0.781 - - - - - - 0.770 - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
12. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 1.543 0.820 - - - - - - 0.723 - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
13. CR354540.2 ENSDARG00000117517 18452 1.527 0.751 - - - - 0.776 - - -
14. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 1.52 0.778 - - - - - 0.742 - - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
15. ppiaa ENSDARG00000009212 290634 1.518 0.794 0.724 - - - - - - - peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
16. tnni2a.4 ENSDARG00000029069 122344 1.505 0.788 - - - - - - 0.717 - troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
17. myhz2 ENSDARG00000012944 69921 1.504 0.787 - - - - 0.717 - - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
18. acta1a ENSDARG00000036371 137508 1.493 0.782 - - - - 0.711 - - - actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
19. ckmb ENSDARG00000040565 505935 1.488 0.760 - - - - - - 0.728 - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
20. atp2a1 ENSDARG00000020574 291561 1.488 0.763 0.725 - - - - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
21. eef1b2 ENSDARG00000044521 26570 1.476 0.747 - - - - 0.729 - - - eukaryotic translation elongation factor 1 beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7310]
22. myoz1b ENSDARG00000071445 13381 1.468 0.763 - - - - - 0.705 - - myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
23. hsp90aa1.1 ENSDARG00000010478 47784 0.874 0.874 - - - - - - - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
24. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 0.869 0.869 - - - - - - - - nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
25. rpl38 ENSDARG00000006413 59590 0.865 0.865 - - - - - - - - ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
26. rpl23a ENSDARG00000006316 59831 0.865 0.865 - - - - - - - - ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
27. tpma ENSDARG00000033683 752432 0.851 0.851 - - - - - - - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
28. rpl22l1 ENSDARG00000010244 36262 0.851 0.851 - - - - - - - - ribosomal protein L22-like 1 [Source:ZFIN;Acc:ZDB-GENE-060804-3]
29. rpl11 ENSDARG00000043509 123498 0.849 0.849 - - - - - - - - ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
30. rps16 ENSDARG00000045487 43243 0.849 0.849 - - - - - - - - ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-050506-107]
31. ak1 ENSDARG00000001950 26964 0.847 0.847 - - - - - - - - adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
32. PTPLA PTPLA 4044 0.845 0.845 - - - - - - - -
33. klhl31 ENSDARG00000039066 13656 0.839 0.839 - - - - - - - - kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
34. myl10 ENSDARG00000062592 101207 0.833 0.833 - - - - - - - - myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
35. cap2 ENSDARG00000104478 3266 0.831 0.831 - - - - - - - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
36. pgam2 ENSDARG00000057571 23387 0.828 0.828 - - - - - - - - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
37. arpp21 ENSDARG00000061081 892 0.822 0.822 - - - - - - - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
38. aldoab ENSDARG00000034470 88942 0.821 0.821 - - - - - - - - aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
39. rps23 ENSDARG00000021838 145026 0.82 0.820 - - - - - - - - ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
40. sh3bgr ENSDARG00000021633 3498 0.82 0.820 - - - - - - - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
41. rpl7 ENSDARG00000007320 81359 0.82 0.820 - - - - - - - - ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
42. tgm2a ENSDARG00000070157 4516 0.819 0.819 - - - - - - - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
43. tpm2 ENSDARG00000104682 36853 0.817 0.817 - - - - - - - - tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
44. smyd1b ENSDARG00000091253 4964 0.817 0.817 - - - - - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
45. ttna ttna 101197 0.816 0.816 - - - - - - - -
46. acta1b ENSDARG00000055618 195597 0.815 0.815 - - - - - - - - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
47. smtnl1 ENSDARG00000041257 7410 0.814 0.814 - - - - - - - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
48. rps26 ENSDARG00000037071 40061 0.812 0.812 - - - - - - - - ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-030131-8606]
49. BX324201.1 BX324201.1 3302 0.808 0.808 - - - - - - - -
50. nmrk2 ENSDARG00000067848 10293 0.808 0.808 - - - - - - - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
51. vcl vcl 6667 0.805 0.805 - - - - - - - -
52. nexn ENSDARG00000057317 10972 0.805 0.805 - - - - - - - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
53. mt-nd4 ENSDARG00000063917 481351 0.804 - - - - - 0.804 - - - NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
54. stac3 ENSDARG00000098883 1765 0.803 0.803 - - - - - - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
55. rps7 ENSDARG00000042566 57650 0.803 0.803 - - - - - - - - ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
56. murcb murcb 13655 0.803 0.803 - - - - - - - -
57. myhz1.3 ENSDARG00000067997 155509 0.802 0.802 - - - - - - - - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
58. smyd2b ENSDARG00000005629 8181 0.802 0.802 - - - - - - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
59. tmem161a ENSDARG00000012790 16094 0.797 0.797 - - - - - - - - transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
60. pygma ENSDARG00000055518 15972 0.795 0.795 - - - - - - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
61. tnni1al 8272 0.794 0.794 - - - - - - - - troponin I, skeletal, slow like, transcript variant X1
62. si:ch211-156j16.1 ENSDARG00000092035 7441 0.793 0.793 - - - - - - - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
63. NRAP ENSDARG00000009341 3565 0.793 0.793 - - - - - - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
64. synpo2lb ENSDARG00000078696 2361 0.793 0.793 - - - - - - - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
65. flncb ENSDARG00000018820 5595 0.793 0.793 - - - - - - - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
66. txlnbb ENSDARG00000076241 6396 0.793 0.793 - - - - - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
67. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 0.793 0.793 - - - - - - - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
68. rpl19 ENSDARG00000013307 122192 0.791 0.791 - - - - - - - - ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
69. hfe2 4113 0.791 0.791 - - - - - - - - hemochromatosis type 2
70. si:ch211-114n24.7 si:ch211-114n24.7 2544 0.79 0.790 - - - - - - - -
71. pvalb4 ENSDARG00000024433 35736 0.789 0.789 - - - - - - - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
72. rps12 ENSDARG00000036875, ENSDARG00000115157 92636 0.789 0.789 - - - - - - - - ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
73. tmem38a ENSDARG00000024047 41883 0.787 0.787 - - - - - - - - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
74. chrnd ENSDARG00000019342 2728 0.787 0.787 - - - - - - - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
75. TMPO TMPO 3264 0.787 0.787 - - - - - - - -
76. rps4x ENSDARG00000014690 88322 0.786 0.786 - - - - - - - - ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
77. cd81 cd81 44833 0.786 0.786 - - - - - - - -
78. AIMP1 ENSDARG00000060036 4136 0.784 0.784 - - - - - - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
79. mt-nd1 ENSDARG00000063895 272230 0.783 0.783 - - - - - - - - NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
80. eif4e2 ENSDARG00000038585 2116 0.782 0.782 - - - - - - - - eukaryotic translation initiation factor 4E family member 2 [Source:ZFIN;Acc:ZDB-GENE-050327-59]
81. mrpl22 ENSDARG00000109961 1374 0.781 0.781 - - - - - - - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
82. trim55a ENSDARG00000029596 2858 0.78 0.780 - - - - - - - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
83. rpl21 ENSDARG00000010516, ENSDARG00000110263 152264 0.779 0.779 - - - - - - - - ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
84. tmem182 tmem182 12589 0.778 0.778 - - - - - - - -
85. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 0.778 0.778 - - - - - - - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
86. PTGES3L PTGES3L 4801 0.777 0.777 - - - - - - - -
87. trdn ENSDARG00000041779 4283 0.777 0.777 - - - - - - - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
88. casq1b ENSDARG00000018105 2643 0.776 0.776 - - - - - - - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
89. casq2 ENSDARG00000008982 21802 0.776 0.776 - - - - - - - - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
90. apobec2a ENSDARG00000018881 4790 0.776 0.776 - - - - - - - - apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
91. cyp4t8 ENSDARG00000004964, ENSDARG00000116412 1111 0.774 0.774 - - - - - - - - cytochrome P450, family 4, subfamily T, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-031219-3]
92. rpl36a ENSDARG00000058105, ENSDARG00000112656 136684 0.774 0.774 - - - - - - - - ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
93. CU633479.5 ENSDARG00000114818 1815 0.772 0.772 - - - - - - - -
94. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 0.772 0.772 - - - - - - - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
95. zgc:92518 ENSDARG00000016343 3837 0.771 0.771 - - - - - - - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
96. si:dkey-181m9.5 si:dkey-181m9.5 1079 0.77 0.770 - - - - - - - -
97. pkmb ENSDARG00000099860 25094 0.769 0.769 - - - - - - - - pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
98. lama2 ENSDARG00000099390 24734 0.769 0.769 - - - - - - - - laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
99. zgc:92113 1738 0.768 0.768 - - - - - - - - zgc:92113
100. rpl10a ENSDARG00000042905, ENSDARG00000115649 202994 0.768 0.768 - - - - - - - - ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]

There are 162 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA