Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for msxe

Gene Name Gene ID Reads Annotation
msxe msxe 362










Genes with expression patterns similar to msxe

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. msxe msxe 362 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. spag1a ENSDARG00000004017 1140 2.391 - - - 0.731 - 0.884 - 0.776 - sperm associated antigen 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9443]
3. nanp ENSDARG00000075143, ENSDARG00000114467 328 2.216 0.758 - - 0.722 - 0.736 - - - N-acetylneuraminic acid phosphatase [Source:ZFIN;Acc:ZDB-GENE-050522-94]
4. si:dkey-220k22.3 ENSDARG00000094693 166 1.886 - - - - - 0.886 1.000 - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
5. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1.876 - 0.891 - - - 0.985 - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
6. C8H1orf194 C8H1orf194 111 1.874 - - - 0.917 - 0.957 - - -
7. ODF3L2 40 1.854 - - - - - 0.901 0.953 - - outer dense fiber of sperm tails 3-like 2
8. gng2_1 ENSDARG00000056831 113 1.837 - 0.891 - - - 0.946 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
9. srpk1b ENSDARG00000031560 2079 1.832 - - - - 0.950 0.882 - - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
10. elk1 ENSDARG00000078066 414 1.83 - - - 0.875 - 0.955 - - - ELK1, member of ETS oncogene family [Source:ZFIN;Acc:ZDB-GENE-090529-5]
11. fut8 fut8 652 1.825 - - - - 0.994 0.831 - - -
12. cx34.4 ENSDARG00000075854 168 1.817 - 0.875 - - - 0.942 - - - connexin 34.4 [Source:ZFIN;Acc:ZDB-GENE-040406-3]
13. dopey1 438 1.815 - 0.819 - - 0.996 - - - - dopey family member 1, transcript variant X4
14. gclc ENSDARG00000013095 2146 1.814 - - - 0.845 0.969 - - - - glutamate-cysteine ligase, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5056]
15. slc25a21 ENSDARG00000060564 344 1.807 - - - 0.860 - 0.947 - - - solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 [Source:ZFIN;Acc:ZDB-GENE-060929-664]
16. SACM1L SACM1L 416 1.804 - - - 0.903 - 0.901 - - -
17. TMEM128 552 1.787 - - - 0.865 - 0.922 - - - transmembrane protein 128
18. nexmifb ENSDARG00000029296 416 1.782 - - - 0.922 - 0.860 - - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
19. zhx2 zhx2 365 1.776 0.867 - - - - 0.909 - - -
20. GLB1L2 ENSDARG00000034941 74 1.769 - 0.827 - 0.942 - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
21. zic5 ENSDARG00000016022 1034 1.764 - - - - 0.981 0.783 - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
22. kifap3b ENSDARG00000006862 613 1.763 - 0.889 - - - 0.874 - - - kinesin-associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2219]
23. plk2b ENSDARG00000019130, ENSDARG00000111402 328 1.763 - - - 0.891 - 0.872 - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
24. marveld3 ENSDARG00000099654 113 1.762 - 0.897 - - - 0.865 - - - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
25. pdpk1b ENSDARG00000018285 957 1.761 - - - 0.773 0.988 - - - - 3-phosphoinositide dependent protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1820]
26. BX927294.1 BX927294.1 361 1.754 - - - 0.891 - 0.863 - - -
27. pan3 ENSDARG00000031637, ENSDARG00000111004 613 1.753 - - - - 0.990 0.763 - - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
28. ube4b ENSDARG00000037017 8012 1.753 - - - 0.877 0.876 - - - - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
29. TUSC5_1 TUSC5_1 320 1.753 - - - - 0.995 0.758 - - -
30. dpp6b ENSDARG00000024744 234 1.752 - - - 0.841 - 0.911 - - - dipeptidyl-peptidase 6b [Source:ZFIN;Acc:ZDB-GENE-070705-88]
31. CR759921.2 CR759921.2 583 1.751 - - - - 0.991 0.760 - - -
32. rdh12 ENSDARG00000018069 396 1.746 - 0.888 - - - 0.858 - - - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
33. lgi1a ENSDARG00000020493 1218 1.74 - 0.745 - - 0.995 - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
34. plekhg6 ENSDARG00000086056 368 1.739 0.916 - - - - 0.823 - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2517]
35. MIS12 ENSDARG00000026454 649 1.739 - - - 0.818 - 0.921 - - - MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-040426-1372]
36. retsatl ENSDARG00000034989 41 1.738 - - - - - 0.993 0.745 - - retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
37. SYT6 SYT6 64 1.738 - 0.934 - - - - 0.804 - -
38. CT030712.1 ENSDARG00000044355 83 1.728 - - - - - 0.983 0.745 - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
39. stat5.2 stat5.2 1187 1.724 - - - 0.915 - 0.809 - - -
40. ric8a ENSDARG00000007247 229 1.721 - - - - - 0.948 0.773 - - RIC8 guanine nucleotide exchange factor A [Source:ZFIN;Acc:ZDB-GENE-040927-18]
41. DLK1 60 1.718 - - - - - 0.973 0.745 - - delta like non-canonical Notch ligand 1
42. CABZ01038313.1 CABZ01038313.1 79 1.718 - - - - - 0.895 0.823 - -
43. comtb ENSDARG00000025679, ENSDARG00000111678 1692 1.715 - - - - 0.989 0.726 - - - catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
44. si:dkeyp-120h9.1 ENSDARG00000020278 3120 1.712 - - - - 0.930 0.782 - - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
45. wdr24 ENSDARG00000025507 505 1.708 - - - - 0.991 - - 0.717 - WD repeat domain 24 [Source:ZFIN;Acc:ZDB-GENE-040426-2012]
46. si:dkey-29b11.3 ENSDARG00000087388 29 1.704 - - 0.704 - - - 1.000 - - si:dkey-29b11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-178]
47. gltpd1 gltpd1 377 1.701 - - - 0.887 - 0.814 - - -
48. fignl1 ENSDARG00000016427 636 1.696 - 0.735 - - - 0.961 - - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
49. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 1.695 - - - 0.766 - 0.929 - - - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
50. LIN9 ENSDARG00000028475 227 1.693 - - - 0.774 - 0.919 - - - lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]
51. lrrc48 lrrc48 50 1.693 - - - 0.940 - - - 0.753 -
52. slc22a2 ENSDARG00000030530 313 1.69 - 0.732 - - - 0.958 - - - solute carrier family 22 (organic cation transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2167]
53. CR936200.1 CR936200.1 327 1.686 - 0.826 - - - 0.860 - - -
54. crmp1 ENSDARG00000056742 332 1.684 - 0.822 - - - 0.862 - - - collapsin response mediator protein 1 [Source:ZFIN;Acc:ZDB-GENE-050720-1]
55. nxf1 ENSDARG00000055076 3251 1.68 - - - - 0.959 0.721 - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
56. si:ch73-44m9.2 ENSDARG00000094821 101 1.679 - - - 0.934 - - 0.745 - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
57. LSM5 ENSDARG00000071573 371 1.678 - - - 0.828 - 0.850 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
58. UNKL ENSDARG00000037838 1086 1.676 - - - - 0.962 0.714 - - - unkempt family zinc finger-like [Source:ZFIN;Acc:ZDB-GENE-131120-196]
59. si:ch211-282k23.2 ENSDARG00000093591 447 1.676 - - - - - 0.950 0.726 - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
60. GRM2 GRM2 372 1.673 - - - 0.863 - 0.810 - - -
61. MLLT1 MLLT1 349 1.671 - - - - - 0.936 - 0.735 -
62. CAPN15 ENSDARG00000060600 248 1.67 - - - 0.918 - 0.752 - - - calpain 15 [Source:ZFIN;Acc:ZDB-GENE-140106-70]
63. sos2 ENSDARG00000060506 769 1.67 - - - 0.774 - 0.896 - - - son of sevenless homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090319-5]
64. msi1 ENSDARG00000010710 2634 1.666 - - - 0.777 0.889 - - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
65. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.662 - - - 0.926 - 0.736 - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
66. mapk8ip2 ENSDARG00000063157 467 1.655 - - - 0.749 - 0.906 - - - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
67. stap2a ENSDARG00000092810 591 1.654 - - - 0.878 - 0.776 - - - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
68. mppe1 ENSDARG00000045416 340 1.654 - - - 0.847 - 0.807 - - - metallophosphoesterase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-195]
69. bend3 ENSDARG00000076903 320 1.639 - - - 0.897 - 0.742 - - - BEN domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-090312-181]
70. zgc:153924 507 1.638 - - 0.782 0.856 - - - - - zgc:153924
71. RNF122 RNF122 29 1.636 - 0.891 - - - - 0.745 - -
72. uncx4.1 ENSDARG00000037760 472 1.636 - 0.811 - 0.825 - - - - - Unc4.1 homeobox (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050714-1]
73. tbcela ENSDARG00000002682 1179 1.633 - - - 0.740 - 0.893 - - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
74. slc44a5b ENSDARG00000057419 534 1.625 - - - 0.789 - 0.836 - - - solute carrier family 44, member 5b [Source:ZFIN;Acc:ZDB-GENE-081105-4]
75. hmg20a ENSDARG00000031198 1763 1.623 - - - - 0.908 - - 0.715 - high mobility group 20A [Source:ZFIN;Acc:ZDB-GENE-030131-5107]
76. dhrs13l1 ENSDARG00000098746 102 1.622 - - - - - 0.828 - 0.794 - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
77. CR626962.1 ENSDARG00000096981 220 1.616 - - - - - 0.836 0.780 - -
78. parp3 ENSDARG00000003961 146 1.61 - - - - - 0.832 - 0.778 - poly (ADP-ribose) polymerase family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7435]
79. wu:fc75a09 ENSDARG00000111625 289 1.597 - 0.812 - - - 0.785 - - - wu:fc75a09 [Source:ZFIN;Acc:ZDB-GENE-030131-4139]
80. zfpl1 ENSDARG00000103453 860 1.596 - - - 0.802 - 0.794 - - - zinc finger protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1255]
81. nr2f1a ENSDARG00000052695 5037 1.586 - - - - 0.838 0.748 - - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
82. RDM1 RDM1 28 1.582 - 0.837 - - - - 0.745 - -
83. mamdc1 mamdc1 156 1.576 - 0.821 - - - 0.755 - - -
84. zgc:110249 ENSDARG00000035221 68 1.572 - 0.827 - - - - 0.745 - - zgc:110249 [Source:ZFIN;Acc:ZDB-GENE-050522-331]
85. atg12 ENSDARG00000069545, ENSDARG00000113990 580 1.564 - - - 0.850 - 0.714 - - - ATG12 autophagy related 12 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-071205-7]
86. bbs7 ENSDARG00000059911 165 1.555 - - - - - 0.798 - 0.757 - Bardet-Biedl syndrome 7 [Source:ZFIN;Acc:ZDB-GENE-030219-90]
87. PLEKHM3 ENSDARG00000030633 496 1.555 - - - 0.842 - 0.713 - - - pleckstrin homology domain containing, family M, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-382]
88. UNCX ENSDARG00000102976 847 1.549 - 0.837 - 0.712 - - - - - UNC homeobox [Source:ZFIN;Acc:ZDB-GENE-080509-1]
89. grm4 ENSDARG00000040156 342 1.549 - - - - - 0.731 0.818 - - glutamate receptor, metabotropic 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5781]
90. notum1a ENSDARG00000031126 825 1.546 - - - 0.818 - 0.728 - - - notum, palmitoleoyl-protein carboxylesterase a [Source:ZFIN;Acc:ZDB-GENE-120807-2]
91. dgat1b ENSDARG00000054914 119 1.542 - 0.827 - - - 0.715 - - - diacylglycerol O-acyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-040718-158]
92. gon4l ENSDARG00000005867 982 1.526 - - - 0.788 - 0.738 - - - gon-4-like (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-070117-2447]
93. CABZ01100187.1 CABZ01100187.1 191 1.516 - - - - - 0.811 - 0.705 -
94. tab3 ENSDARG00000062063 525 1.514 - 0.810 - - - - - 0.704 - TGF-beta activated kinase 1 (MAP3K7) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060503-408]
95. tmem178 ENSDARG00000020758 77 1.51 - - - - - 0.765 0.745 - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
96. OVOL1 75 1.503 - - - 0.758 - - 0.745 - - ovo-like zinc finger 1, transcript variant X1
97. si:ch211-229n2.7 ENSDARG00000094088 410 1.502 0.769 - - 0.733 - - - - - si:ch211-229n2.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8579]
98. tubgcp2 ENSDARG00000013079 1520 1.498 - - - - 0.729 0.769 - - - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
99. mn1b ENSDARG00000079248 882 1.495 - - - 0.791 - 0.704 - - - meningioma 1b [Source:ZFIN;Acc:ZDB-GENE-080917-23]
100. AL929222.1 ENSDARG00000096994 1293 1.488 - 0.734 - 0.754 - - - - -

There are 2329 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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