Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for msrb3

Gene Name Gene ID Reads Annotation
msrb3 ENSDARG00000045658 988 methionine sulfoxide reductase B3 [Source:ZFIN;Acc:ZDB-GENE-040625-74]










Genes with expression patterns similar to msrb3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. msrb3 ENSDARG00000045658 988 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 methionine sulfoxide reductase B3 [Source:ZFIN;Acc:ZDB-GENE-040625-74]
2. ahsa1 ahsa1 2012 1.81 - 0.905 - - - - 0.905 - -
3. gspt1 ENSDARG00000031048, ENSDARG00000109388 2735 1.692 - 0.862 - - - - 0.830 - - G1 to S phase transition 1 [Source:ZFIN;Acc:ZDB-GENE-040822-36]
4. hhatla ENSDARG00000039051 6598 1.68 - - 0.722 - - - 0.958 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
5. rtn2a ENSDARG00000016088 12184 1.679 - - 0.748 - - - 0.931 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
6. EHBP1L1 EHBP1L1 2500 1.678 - - 0.729 - - - 0.949 - -
7. sh3bgr ENSDARG00000021633 3498 1.677 - - - - - - 0.956 - 0.721 SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
8. trdn ENSDARG00000041779 4283 1.673 - - 0.776 - - - 0.897 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
9. BX294434.1 ENSDARG00000061272 6493 1.668 - - 0.731 - - - 0.937 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
10. prx ENSDARG00000017246 6183 1.658 - - 0.730 - - - 0.928 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
11. myoz2b ENSDARG00000037266 2139 1.655 - - - 0.801 - - 0.854 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
12. pfdn6 ENSDARG00000037108 2083 1.651 - 0.775 - - - - 0.876 - - prefoldin subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1589]
13. lyrm1 ENSDARG00000026281 303 1.647 0.759 0.888 - - - - - - - LYR motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-210]
14. C22H19orf70 C22H19orf70 4393 1.64 0.731 - - - - - 0.909 - -
15. NTAN1 ENSDARG00000105182 844 1.632 - 0.874 - 0.758 - - - - - N-terminal asparagine amidase [Source:ZFIN;Acc:ZDB-GENE-040426-1896]
16. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 1.632 - - - 0.792 - - 0.840 - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
17. hspb9 ENSDARG00000078674 2755 1.626 - 0.836 - - - - 0.790 - - heat shock protein, alpha-crystallin-related, 9 [Source:ZFIN;Acc:ZDB-GENE-080214-6]
18. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.623 - - 0.756 - - - 0.867 - -
19. CABZ01080590.2 CABZ01080590.2 2038 1.622 - 0.711 - - - - 0.911 - -
20. ryr1b ENSDARG00000023797 5693 1.618 - - 0.721 - - - 0.897 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
21. LIMD1_1 LIMD1_1 348 1.617 - - - 0.791 - - 0.826 - -
22. lrig1 ENSDARG00000075625 2027 1.615 - 0.737 - - - - 0.878 - - leucine-rich repeats and immunoglobulin-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-031113-23]
23. CRAT CRAT 521 1.615 0.723 - - - - - 0.892 - -
24. SPEG SPEG 4017 1.614 - - - - - - 0.913 - 0.701
25. ppp1r14bb ENSDARG00000030161 2349 1.604 - 0.814 - - - - 0.790 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Bb [Source:ZFIN;Acc:ZDB-GENE-030616-595]
26. vapb ENSDARG00000070435, ENSDARG00000112097 6469 1.595 - - 0.755 - - - 0.840 - - VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:ZFIN;Acc:ZDB-GENE-030131-2348]
27. dnajc18 ENSDARG00000056005 8084 1.586 0.815 - - - - - 0.771 - - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
28. CLDN23 CLDN23 2002 1.584 - 0.813 - 0.771 - - - - -
29. CHCHD3 CHCHD3 1425 1.584 - - 0.721 - - - 0.863 - -
30. mto1 ENSDARG00000055679 859 1.575 - 0.869 - - - - 0.706 - - mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
31. C18H15orf61 C18H15orf61 104 1.573 - 0.835 - - - 0.738 - - -
32. sppl2 ENSDARG00000030448 1040 1.572 0.701 0.871 - - - - - - - signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
33. eprs ENSDARG00000060494 4729 1.568 - 0.728 - - - - 0.840 - - glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
34. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.568 0.717 - - - - - 0.851 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
35. tnnt3a ENSDARG00000030270 112506 1.565 - - 0.783 - - - 0.782 - - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
36. znrd1 ENSDARG00000036070 684 1.563 0.705 0.858 - - - - - - - zinc ribbon domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-131]
37. si:ch211-218g4.2 ENSDARG00000078145 778 1.558 0.715 0.843 - - - - - - - si:ch211-218g4.2 [Source:ZFIN;Acc:ZDB-GENE-090312-60]
38. immt ENSDARG00000102874 3435 1.545 - 0.758 - - - - 0.787 - - inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
39. nap1l4a ENSDARG00000070560, ENSDARG00000113907 4244 1.526 - - - 0.702 - - 0.824 - - nucleosome assembly protein 1-like 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9099]
40. rnf123 ENSDARG00000031269 519 1.524 - - - 0.823 - - 0.701 - - ring finger protein 123 [Source:ZFIN;Acc:ZDB-GENE-050208-529]
41. srpx ENSDARG00000010318 946 1.512 - 0.808 - - - - 0.704 - - sushi-repeat containing protein X-linked [Source:ZFIN;Acc:ZDB-GENE-050327-43]
42. tpma ENSDARG00000033683 752432 1.509 - - 0.721 - - - 0.788 - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
43. ulk1b ENSDARG00000074481 1212 1.506 - 0.793 - - - - 0.713 - - unc-51 like autophagy activating kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071203-2]
44. cmc2 ENSDARG00000043635 591 1.501 - - - - - 0.717 0.784 - - C-x(9)-C motif containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-409]
45. cfl2 ENSDARG00000014106 8051 1.498 - - 0.733 - - - 0.765 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
46. mylz3 ENSDARG00000017441 303597 1.492 - - 0.784 - - - 0.708 - - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
47. CABZ01074309.1 CABZ01074309.1 121 1.488 - - - 0.751 - - 0.737 - -
48. eef2l2 ENSDARG00000035256 6815 1.47 - - 0.712 - - - 0.758 - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
49. acta1b ENSDARG00000055618 195597 1.469 - - 0.746 - - - 0.723 - - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
50. ZNF609 ZNF609 2176 1.463 0.723 - - - - - 0.740 - -
51. USP54 USP54 186 1.455 - - - 0.712 - - 0.743 - -
52. dnmt3b dnmt3b 2522 1.453 - 0.735 - - - 0.718 - - -
53. zdhhc17 ENSDARG00000070441 1073 1.433 - 0.716 - - - 0.717 - - - zinc finger, DHHC-type containing 17 [Source:ZFIN;Acc:ZDB-GENE-070424-194]
54. tspan18a ENSDARG00000056656 530 1.419 0.703 - - - - - 0.716 - - tetraspanin 18a [Source:ZFIN;Acc:ZDB-GENE-040718-232]
55. chrnd ENSDARG00000019342 2728 0.96 - - - - - - 0.960 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
56. rtn2b ENSDARG00000057027 1391 0.956 - - - - - - 0.956 - - reticulon 2b [Source:ZFIN;Acc:ZDB-GENE-060331-95]
57. DNAJA4 ENSDARG00000051762 5657 0.952 - - - - - - 0.952 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
58. klhl41b ENSDARG00000006757 10762 0.95 - - - - - - 0.950 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
59. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 0.949 - - - - - - 0.949 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
60. pmp22b ENSDARG00000060457 20406 0.947 - - - - - - 0.947 - - peripheral myelin protein 22b [Source:ZFIN;Acc:ZDB-GENE-060421-4337]
61. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 0.944 - - - - - - 0.944 - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
62. NRAP ENSDARG00000009341 3565 0.942 - - - - - - 0.942 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
63. chrne ENSDARG00000034307, ENSDARG00000112263 1022 0.941 - - - - - - 0.941 - - cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
64. mdh1b ENSDARG00000018008 3196 0.941 - - - - - - 0.941 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
65. pbxip1a ENSDARG00000071015 4960 0.94 - - - - - - 0.940 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
66. chrna1 ENSDARG00000009021 2931 0.94 - - - - - - 0.940 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
67. TRIM63 TRIM63 1600 0.938 - - - - - - 0.938 - -
68. zgc:92518 ENSDARG00000016343 3837 0.937 - - - - - - 0.937 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
69. glra4a ENSDARG00000006865, ENSDARG00000109562 1117 0.937 - - - - - - 0.937 - - glycine receptor, alpha 4a [Source:ZFIN;Acc:ZDB-GENE-010410-3]
70. zgc:92113 1738 0.937 - - - - - - 0.937 - - zgc:92113
71. sar1ab ENSDARG00000033320 3984 0.935 - - - - - - 0.935 - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
72. tnw 16679 0.935 - - - - - - 0.935 - - tenascin W, transcript variant X2
73. cmya5 ENSDARG00000061379 1423 0.934 - - - - - - 0.934 - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
74. usp1 ENSDARG00000056414 1816 0.931 - 0.931 - - - - - - - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
75. nmrk2 ENSDARG00000067848 10293 0.931 - - - - - - 0.931 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
76. zgc:158296 ENSDARG00000070923 3935 0.93 - - - - - - 0.930 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
77. casq1b ENSDARG00000018105 2643 0.93 - - - - - - 0.930 - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
78. eef2k ENSDARG00000035835 2906 0.93 - - - - - - 0.930 - - eukaryotic elongation factor 2 kinase [Source:ZFIN;Acc:ZDB-GENE-020916-2]
79. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 0.929 - - - - - - 0.929 - - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
80. obsl1b ENSDARG00000077388 2511 0.929 - - - - - - 0.929 - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
81. nexn ENSDARG00000057317 10972 0.928 - - - - - - 0.928 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
82. alpk3a ENSDARG00000078989 1992 0.928 - - - - - - 0.928 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
83. PTPLA PTPLA 4044 0.928 - - - - - - 0.928 - -
84. txlnbb ENSDARG00000076241 6396 0.926 - - - - - - 0.926 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
85. gmpr ENSDARG00000016160 1537 0.925 - - - - - - 0.925 - - guanosine monophosphate reductase [Source:ZFIN;Acc:ZDB-GENE-050522-48]
86. unc45b ENSDARG00000008433 8298 0.925 - - - - - - 0.925 - - unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
87. sptb ENSDARG00000030490 7128 0.925 - - - - - - 0.925 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
88. tmem182 tmem182 12589 0.924 - - - - - - 0.924 - -
89. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 0.924 - - - - - - 0.924 - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
90. tgm2a ENSDARG00000070157 4516 0.923 - - - - - - 0.923 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
91. jph2 ENSDARG00000028625 6706 0.923 - - - - - - 0.923 - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
92. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 0.923 - 0.923 - - - - - - - ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
93. smtnl1 ENSDARG00000041257 7410 0.922 - - - - - - 0.922 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
94. mark3 mark3 1375 0.921 - 0.921 - - - - - - -
95. MUSTN1 MUSTN1 1882 0.921 - - - - - - 0.921 - -
96. COL22A1 COL22A1 4473 0.921 - - - - - - 0.921 - -
97. myom1a ENSDARG00000061249 10230 0.919 - - - - - - 0.919 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
98. sgcd ENSDARG00000098573 4980 0.917 - - - - - - 0.917 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
99. mdh2 ENSDARG00000043371 14485 0.916 - - - - - - 0.916 - - malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
100. hdac9b ENSDARG00000056642 1148 0.916 - - - - - - 0.916 - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]

There are 1307 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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