Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for msrb1a

Gene Name Gene ID Reads Annotation
msrb1a ENSDARG00000025436 640 methionine sulfoxide reductase B1a [Source:ZFIN;Acc:ZDB-GENE-030411-3]










Genes with expression patterns similar to msrb1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. msrb1a ENSDARG00000025436 640 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 methionine sulfoxide reductase B1a [Source:ZFIN;Acc:ZDB-GENE-030411-3]
2. gpx7 ENSDARG00000091511 3045 1.526 - 0.751 - - - - 0.775 - - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
3. ncoa3 ENSDARG00000077404 1957 1.508 - 0.777 - - - - 0.731 - - nuclear receptor coactivator 3 [Source:ZFIN;Acc:ZDB-GENE-051107-8]
4. mrps10 ENSDARG00000045913 1453 1.461 - 0.751 - - - - 0.710 - - mitochondrial ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040914-39]
5. snrnp70 ENSDARG00000077126 5921 0.865 - 0.865 - - - - - - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
6. USO1 ENSDARG00000019581 1617 0.855 - - - - - 0.855 - - - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
7. rassf7b ENSDARG00000003193 460 0.855 - - - - - 0.855 - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 7b [Source:ZFIN;Acc:ZDB-GENE-030429-1]
8. ephb3a ENSDARG00000031548 1872 0.853 - 0.853 - - - - - - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
9. map3k7cl ENSDARG00000069143 130 0.839 - - - 0.839 - - - - - map3k7 C-terminal like [Source:ZFIN;Acc:ZDB-GENE-091204-239]
10. acsl4l acsl4l 540 0.836 - - - - - 0.836 - - -
11. rab5b ENSDARG00000016059, ENSDARG00000114966 1252 0.835 - - - - - 0.835 - - - RAB5B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2593]
12. bmp1a ENSDARG00000028071 583 0.834 - 0.834 - - - - - - - bone morphogenetic protein 1a [Source:ZFIN;Acc:ZDB-GENE-060818-1]
13. tnni2a.2 ENSDARG00000005841 483 0.834 - 0.834 - - - - - - - troponin I type 2a (skeletal, fast), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-970]
14. DUSP26 ENSDARG00000103752 404 0.832 - 0.832 - - - - - - - dual specificity phosphatase 26 [Source:HGNC Symbol;Acc:HGNC:28161]
15. sh3glb1 sh3glb1 1335 0.832 - - - - - - 0.832 - -
16. ASXL2 ENSDARG00000076501 378 0.827 - - - - - 0.827 - - - ASXL transcriptional regulator 2 [Source:ZFIN;Acc:ZDB-GENE-100412-1]
17. C1H10orf12 C1H10orf12 1663 0.827 - 0.827 - - - - - - -
18. si:ch211-191j22.3 ENSDARG00000095459 959 0.827 - 0.827 - - - - - - - si:ch211-191j22.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4242]
19. diablob ENSDARG00000014956 745 0.825 - - - - - 0.825 - - - diablo, IAP-binding mitochondrial protein b [Source:ZFIN;Acc:ZDB-GENE-070112-202]
20. cdc5l ENSDARG00000043797 985 0.825 - 0.825 - - - - - - - CDC5 cell division cycle 5-like (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040426-821]
21. TNKS TNKS 2775 0.823 - 0.823 - - - - - - -
22. cxxc1l cxxc1l 1035 0.822 - - - - - 0.822 - - -
23. rab33ba ENSDARG00000052290 914 0.822 0.822 - - - - - - - - RAB33B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-122]
24. pom121 ENSDARG00000055113 1063 0.819 - - - - - 0.819 - - - POM121 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-6557]
25. prex1 ENSDARG00000075793 1017 0.818 - 0.818 - - - - - - - phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1428]
26. rras2 ENSDARG00000036252, ENSDARG00000111642 1714 0.816 - 0.816 - - - - - - - RAS related 2 [Source:ZFIN;Acc:ZDB-GENE-050417-352]
27. dhx9 ENSDARG00000079725 1241 0.816 - 0.816 - - - - - - - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
28. thtpa ENSDARG00000063049 286 0.815 - 0.815 - - - - - - - thiamine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-070502-2]
29. baz1a ENSDARG00000063233, ENSDARG00000099745 563 0.81 - 0.810 - - - - - - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
30. tfap2a ENSDARG00000059279 3741 0.808 - - - - - 0.808 - - - transcription factor AP-2 alpha [Source:ZFIN;Acc:ZDB-GENE-011212-6]
31. alx4a ENSDARG00000088332 895 0.807 - - - - - 0.807 - - - ALX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-070712-3]
32. rassf10a 417 0.807 - - - - - 0.807 - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
33. drg2 ENSDARG00000006642 1167 0.807 - - - - - 0.807 - - - developmentally regulated GTP binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040808-29]
34. wdr43 ENSDARG00000077264 1992 0.806 - 0.806 - - - - - - - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
35. si:ch211-242b18.1 ENSDARG00000054723 2929 0.805 - 0.805 - - - - - - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
36. timm8b ENSDARG00000055708 7291 0.804 - 0.804 - - - - - - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
37. gsk3ab ENSDARG00000015681 1322 0.803 - 0.803 - - - - - - - glycogen synthase kinase 3 alpha b [Source:ZFIN;Acc:ZDB-GENE-990714-3]
38. mlec ENSDARG00000059630 2057 0.803 - - - - - 0.803 - - - malectin [Source:ZFIN;Acc:ZDB-GENE-081105-187]
39. PVRL4 1691 0.802 - - - - - 0.802 - - - poliovirus receptor-related 4
40. fam91a1 ENSDARG00000003320, ENSDARG00000116699 1566 0.802 - 0.802 - - - - - - - family with sequence similarity 91, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1187]
41. ghrb ENSDARG00000007671 1082 0.801 - - - - - 0.801 - - - growth hormone receptor b [Source:ZFIN;Acc:ZDB-GENE-071119-4]
42. atf7a ENSDARG00000011298 703 0.801 - 0.801 - - - - - - - activating transcription factor 7a [Source:ZFIN;Acc:ZDB-GENE-050721-2]
43. chuk ENSDARG00000011662 1668 0.8 - - - - - 0.800 - - - conserved helix-loop-helix ubiquitous kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1069]
44. vgll4b ENSDARG00000103730 5266 0.798 - - - - - - 0.798 - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
45. wdr12 ENSDARG00000003287 1026 0.798 - 0.798 - - - - - - - WD repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-030131-371]
46. cox16 ENSDARG00000039136 1066 0.798 - - - - - 0.798 - - - cytochrome c oxidase assembly factor COX16 [Source:ZFIN;Acc:ZDB-GENE-050417-60]
47. TPP2 ENSDARG00000078751 2755 0.797 - - - - - 0.797 - - - tripeptidyl peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-121214-290]
48. mob1ba ENSDARG00000009169 1019 0.796 - - - - - 0.796 - - - MOB kinase activator 1Ba [Source:ZFIN;Acc:ZDB-GENE-040426-919]
49. git2a ENSDARG00000061915 884 0.796 - 0.796 - - - - - - - G protein-coupled receptor kinase interacting ArfGAP 2a [Source:ZFIN;Acc:ZDB-GENE-060526-267]
50. sav1 ENSDARG00000006196 1201 0.796 - - - - - - 0.796 - - salvador family WW domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-040912-28]
51. lhfpl2b ENSDARG00000098153 132 0.795 - - - - - 0.795 - - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
52. vcanb ENSDARG00000009401 3611 0.795 - 0.795 - - - - - - - versican b [Source:ZFIN;Acc:ZDB-GENE-030131-2185]
53. rev1 ENSDARG00000018296, ENSDARG00000115137 1159 0.795 - 0.795 - - - - - - - REV1, polymerase (DNA directed) [Source:ZFIN;Acc:ZDB-GENE-081105-180]
54. si:dkey-153m14.1 si:dkey-153m14.1 4591 0.793 - - - - - - 0.793 - -
55. cdkal1 ENSDARG00000104848 2102 0.793 - 0.793 - - - - - - - CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
56. HECW1 HECW1 1531 0.793 - 0.793 - - - - - - -
57. AL929222.1 ENSDARG00000096994 1293 0.791 - 0.791 - - - - - - -
58. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 0.79 - 0.790 - - - - - - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
59. usf1l ENSDARG00000014463, ENSDARG00000109684, ENSDARG00000114279 1581 0.789 - - - - - 0.789 - - - upstream transcription factor 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-2269]
60. auh ENSDARG00000042975 1841 0.789 - - - - - 0.789 - - - AU RNA binding protein/enoyl-CoA hydratase [Source:ZFIN;Acc:ZDB-GENE-040801-95]
61. gemin8 ENSDARG00000053496, ENSDARG00000115240 1214 0.785 - 0.785 - - - - - - - gem (nuclear organelle) associated protein 8 [Source:ZFIN;Acc:ZDB-GENE-041114-189]
62. CABZ01044023.1 ENSDARG00000117734 240 0.784 - 0.784 - - - - - - -
63. si:dkey-239h2.3 ENSDARG00000092033 398 0.784 - - - 0.784 - - - - - si:dkey-239h2.3 [Source:ZFIN;Acc:ZDB-GENE-081104-383]
64. chst2a ENSDARG00000075007 726 0.784 - 0.784 - - - - - - - carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2a [Source:ZFIN;Acc:ZDB-GENE-060929-40]
65. dlg1l ENSDARG00000102216 1960 0.784 - - - - - 0.784 - - - discs, large (Drosophila) homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-050222-3]
66. nucks1b ENSDARG00000012777 4468 0.783 - 0.783 - - - - - - - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
67. timm9 ENSDARG00000043865 2456 0.782 - - - - - - 0.782 - - translocase of inner mitochondrial membrane 9 homolog [Source:ZFIN;Acc:ZDB-GENE-021206-14]
68. cplx4c ENSDARG00000094889 253 0.781 - 0.781 - - - - - - - complexin 4c [Source:ZFIN;Acc:ZDB-GENE-101018-1]
69. pdlim2 ENSDARG00000069956 317 0.781 - - - - - 0.781 - - - PDZ and LIM domain 2 (mystique) [Source:ZFIN;Acc:ZDB-GENE-070308-4]
70. pygo2 ENSDARG00000036772 2510 0.78 - 0.780 - - - - - - - pygopus homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050809-108]
71. TULP1_1 TULP1_1 260 0.78 - 0.780 - - - - - - -
72. ercc6 ENSDARG00000075612 1175 0.78 - - - - - 0.780 - - - excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
73. slc25a12 ENSDARG00000102362 2773 0.78 - 0.780 - - - - - - - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
74. adh5 ENSDARG00000080010, ENSDARG00000111574 4980 0.78 - - - - - - 0.780 - - alcohol dehydrogenase 5 [Source:ZFIN;Acc:ZDB-GENE-011003-1]
75. pinx1 ENSDARG00000023532 4452 0.778 - - - - - 0.778 - - - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
76. gtpbp4 ENSDARG00000018961 5323 0.778 - - - - - - 0.778 - - GTP binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5982]
77. myf6 ENSDARG00000029830 1911 0.778 - 0.778 - - - - - - - myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
78. epha7 ENSDARG00000004635, ENSDARG00000112305 1373 0.777 - 0.777 - - - - - - - eph receptor A7 [Source:ZFIN;Acc:ZDB-GENE-030131-3745]
79. agpat3 ENSDARG00000036549 1093 0.776 - - - - - 0.776 - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2765]
80. si:dkey-157l19.2 ENSDARG00000060340 635 0.776 - - - - - 0.776 - - - si:dkey-157l19.2 [Source:ZFIN;Acc:ZDB-GENE-090313-190]
81. larp7 ENSDARG00000017315 1194 0.774 0.774 - - - - - - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
82. rorca ENSDARG00000057231, ENSDARG00000111082 894 0.774 - - - - - - 0.774 - - RAR-related orphan receptor C a [Source:ZFIN;Acc:ZDB-GENE-990415-250]
83. TSPAN4 TSPAN4 941 0.773 - 0.773 - - - - - - -
84. srsf9 ENSDARG00000008097 2405 0.773 - - - - - 0.773 - - - serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
85. cxadr ENSDARG00000043658, ENSDARG00000110210, ENSDARG00000111984 451 0.772 - - - - - 0.772 - - - CXADR, Ig-like cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-020814-2]
86. hbegfa ENSDARG00000075121 1865 0.772 - - - - - 0.772 - - - heparin-binding EGF-like growth factor a [Source:ZFIN;Acc:ZDB-GENE-080204-119]
87. golgb1 ENSDARG00000061951 2023 0.772 - - - - - 0.772 - - - golgin B1 [Source:ZFIN;Acc:ZDB-GENE-030429-9]
88. rbm39b ENSDARG00000041853 1421 0.772 - 0.772 - - - - - - - RNA binding motif protein 39b [Source:ZFIN;Acc:ZDB-GENE-050327-97]
89. BX511086.1 BX511086.1 8308 0.771 - 0.771 - - - - - - -
90. ppp1r2 ENSDARG00000054007 1585 0.769 - - - - - - 0.769 - - protein phosphatase 1, regulatory (inhibitor) subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1814]
91. pak6b ENSDARG00000052405 537 0.769 - - - - - 0.769 - - - p21 protein (Cdc42/Rac)-activated kinase 6b [Source:ZFIN;Acc:ZDB-GENE-041014-121]
92. ctdspl2b ENSDARG00000060586 1682 0.769 - 0.769 - - - - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1809]
93. zgc:92313 ENSDARG00000040513 790 0.769 - - - 0.769 - - - - - zgc:92313 [Source:ZFIN;Acc:ZDB-GENE-040718-339]
94. MSS51 ENSDARG00000075463 428 0.768 - 0.768 - - - - - - - MSS51 mitochondrial translational activator [Source:ZFIN;Acc:ZDB-GENE-130530-775]
95. xirp1 ENSDARG00000030722 1486 0.767 - 0.767 - - - - - - - xin actin binding repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050221-2]
96. dlgap1b ENSDARG00000037415 658 0.766 - 0.766 - - - - - - - discs, large (Drosophila) homolog-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-091116-98]
97. krr1 ENSDARG00000011246 1624 0.766 - 0.766 - - - - - - - KRR1, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060623-10]
98. pid1 ENSDARG00000098984, ENSDARG00000114639 1252 0.765 - - - - - 0.765 - - - phosphotyrosine interaction domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-72]
99. fat1 fat1 3934 0.765 - 0.765 - - - - - - -
100. vgll4a ENSDARG00000094332 1410 0.765 - - - - - 0.765 - - - vestigial-like family member 4a [Source:ZFIN;Acc:ZDB-GENE-100922-230]

There are 366 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA