Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for msnb

Gene Name Gene ID Reads Annotation
msnb ENSDARG00000028740, ENSDARG00000109311, ENSDARG00000110190 24 moesin b [Source:ZFIN;Acc:ZDB-GENE-030717-7]










Genes with expression patterns similar to msnb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. msnb ENSDARG00000028740, ENSDARG00000109311, ENSDARG00000110190 24 6 - - 1.000 1.000 1.000 - 1.000 1.000 1.000 moesin b [Source:ZFIN;Acc:ZDB-GENE-030717-7]
2. rx2 ENSDARG00000040321 112 3.208 - - 0.846 0.715 - - - 0.744 0.903 retinal homeobox gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-237]
3. rorb ENSDARG00000033498 544 3.145 - - 0.735 0.705 - - - 0.804 0.901 RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
4. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 2.902 - - - 0.745 0.710 - - 0.720 0.727 cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
5. slc6a1a ENSDARG00000045944 260 2.53 - - - - 0.887 - - 0.874 0.769 solute carrier family 6 (neurotransmitter transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-060519-23]
6. prdm1b ENSDARG00000098925 440 2.478 - - 0.835 0.717 - - - - 0.926 PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
7. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 2.412 - - 0.807 0.793 - - - - 0.812 H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
8. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 2.349 - - 0.733 - - - - 0.718 0.898 H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
9. pmelb ENSDARG00000033760 206 2.334 - - 0.764 - - - - 0.727 0.843 premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
10. fezf1 ENSDARG00000010270 379 2.306 - - - 0.822 0.766 - - - 0.718 FEZ family zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060929-970]
11. TMEM57 TMEM57 260 2.184 - - 0.763 0.705 - - - 0.716 -
12. rx1 ENSDARG00000071684 247 1.761 - - - - - - - 0.806 0.955 retinal homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-236]
13. GPRIN1 10 1.757 - - - - - - 1.000 - 0.757 G protein regulated inducer of neurite outgrowth 1
14. SLC9B1 SLC9B1 137 1.742 - - - - - - 1.000 0.742 -
15. six3b ENSDARG00000054879 2416 1.72 - - - - - - - 0.833 0.887 SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
16. C4H12orf39 C4H12orf39 73 1.717 - - - - 0.717 - 1.000 - -
17. akap1a ENSDARG00000089802 5 1.703 - - - - 0.703 - 1.000 - - A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980]
18. ndrg1b ENSDARG00000010420 116 1.695 - - - - - - - 0.764 0.931 N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
19. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.692 - - - - - - - 0.831 0.861 zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
20. vsx2 ENSDARG00000005574 102 1.668 - - 0.773 - - - - - 0.895 visual system homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001222-1]
21. atoh7 ENSDARG00000069552 254 1.66 - - - 0.705 - - - - 0.955 atonal bHLH transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-000926-1]
22. fabp11b ENSDARG00000002311 354 1.657 - - 0.715 - - - - - 0.942 fatty acid binding protein 11b [Source:ZFIN;Acc:ZDB-GENE-050522-391]
23. cspg5b ENSDARG00000099793 67 1.651 - - - - - - - 0.716 0.935 chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
24. fezf2 ENSDARG00000070677 224 1.644 - - 0.870 - - - - - 0.774 FEZ family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-001103-3]
25. mybl1 ENSDARG00000030999 158 1.639 - - - - - - - 0.813 0.826 v-myb avian myeloblastosis viral oncogene homolog-like 1 [Source:ZFIN;Acc:ZDB-GENE-041111-281]
26. foxg1b ENSDARG00000032705 354 1.636 - - 0.722 - - - - - 0.914 forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
27. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1.623 - - 0.780 - - - - - 0.843 cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
28. ccna1 ENSDARG00000043236 13 1.623 - - - - 0.814 - - - 0.809 cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-040311-2]
29. ahr1b ENSDARG00000023537 44 1.609 - - 0.738 - - - - - 0.871 aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
30. pax6a ENSDARG00000103379 3061 1.605 - - 0.708 - - - - 0.897 - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
31. zbtb18 ENSDARG00000028228 3653 1.599 - - - - - - - 0.792 0.807 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
32. slc38a3a ENSDARG00000027065, ENSDARG00000112018 95 1.591 - - - - - - - 0.827 0.764 solute carrier family 38, member 3a [Source:ZFIN;Acc:ZDB-GENE-070615-25]
33. fzd5 ENSDARG00000025420 1082 1.582 - - - - - - - 0.705 0.877 frizzled class receptor 5 [Source:ZFIN;Acc:ZDB-GENE-990415-218]
34. cxxc4 ENSDARG00000077817 197 1.57 - - - - - - - 0.815 0.755 CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
35. ephb2a ENSDARG00000037373, ENSDARG00000114174 104 1.552 - - 0.751 - - - - - 0.801 eph receptor B2a [Source:ZFIN;Acc:ZDB-GENE-070713-2]
36. grifin ENSDARG00000033382 141 1.549 - - 0.759 - - - - 0.790 - galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
37. otx2 766 1.548 - - - - - - - 0.777 0.771 orthodenticle homeobox 2, transcript variant X2
38. SP5 SP5 8 1.54 - - 0.756 0.784 - - - - -
39. lmo1 ENSDARG00000034504 260 1.531 - - - - - - - 0.724 0.807 LIM domain only 1 [Source:ZFIN;Acc:ZDB-GENE-021115-6]
40. lingo2 lingo2 67 1.531 - - - - - - - 0.811 0.720
41. defbl1 ENSDARG00000075161 211 1.528 - - - - - - - 0.701 0.827 defensin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-070207-1]
42. zgc:158654 19 1.524 - - - - 0.803 - - - 0.721 zgc:158654, transcript variant X1
43. celf4 ENSDARG00000070045 1537 1.502 - - 0.712 - - - - 0.790 - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
44. amer2 ENSDARG00000075222 594 1.494 - - - 0.729 - - - - 0.765 APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
45. CABZ01029738.1 CABZ01029738.1 327 1.491 - - - - - - - 0.774 0.717
46. gpr37l1b ENSDARG00000056774, ENSDARG00000114481 143 1.487 - - - - - - - 0.759 0.728 G protein-coupled receptor 37 like 1b [Source:ZFIN;Acc:ZDB-GENE-081104-324]
47. DNER ENSDARG00000061031 123 1.468 - - 0.746 - - - - 0.722 - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
48. si:ch211-274p24.3 si:ch211-274p24.3 72 1.454 - - 0.722 0.732 - - - - -
49. celf3a ENSDARG00000034668 2432 1.448 - - - - - - - 0.704 0.744 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
50. fxyd6 ENSDARG00000100971 51 1.44 - - - - - - - 0.730 0.710 FXYD domain containing ion transport regulator 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5919]
51. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 1.436 - - - 0.712 - - - 0.724 - SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
52. crybb1l2 ENSDARG00000016793 723 1.43 - - 0.707 0.723 - - - - - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
53. crybb1l1 ENSDARG00000007576 1020 1.419 - - 0.717 - - - - 0.702 - crystallin, beta B1, like 1 [Source:ZFIN;Acc:ZDB-GENE-100112-3]
54. EGFR_1 EGFR_1 2 1 - - - - - - 1.000 - -
55. snx33 ENSDARG00000014954 45 1 - - - - - - 1.000 - - sorting nexin 33 [Source:ZFIN;Acc:ZDB-GENE-041111-209]
56. GPR97_1 GPR97_1 2 1 - - - - - - 1.000 - -
57. si:ch211-1f22.17 si:ch211-1f22.17 10 1 - - - - - - 1.000 - -
58. si:ch211-250n8.1 ENSDARG00000088736 4 1 - - - - - - 1.000 - - si:ch211-250n8.1 [Source:ZFIN;Acc:ZDB-GENE-130603-2]
59. usp53b ENSDARG00000076499 16 1 - - - - - - 1.000 - - ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]
60. RECK ENSDARG00000090039 15 1 - - - - - - 1.000 - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
61. flnb ENSDARG00000092281 10 1 - - - - - - 1.000 - - filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
62. gpr155a ENSDARG00000090804 27 1 - - - - - - 1.000 - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
63. CMTM8 CMTM8 71 1 - - - - - - 1.000 - -
64. alg13 ENSDARG00000054374 2 1 - - - - - - 1.000 - - ALG13, UDP-N-acetylglucosaminyltransferase subunit [Source:ZFIN;Acc:ZDB-GENE-060307-1]
65. KAZN_1 KAZN_1 13 1 - - - - - - 1.000 - -
66. si:dkey-21n8.3 si:dkey-21n8.3 5 1 - - - - - - 1.000 - -
67. paplnb ENSDARG00000042186 18 1 - - - - - - 1.000 - - papilin b, proteoglycan-like sulfated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-6023]
68. setd1bb ENSDARG00000077244 34 1 - - - - - - 1.000 - - SET domain containing 1B, b [Source:ZFIN;Acc:ZDB-GENE-080522-1]
69. KLHDC3 ENSDARG00000102772 14 1 - - - - - - 1.000 - - kelch domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2426]
70. gpr75 ENSDARG00000098526 32 1 - - - - - - 1.000 - - G protein-coupled receptor 75 [Source:ZFIN;Acc:ZDB-GENE-100316-3]
71. si:ch211-203l7.3 si:ch211-203l7.3 0 1 - - - - - - 1.000 - -
72. FJX1 ENSDARG00000035873 22 1 - - - - - - 1.000 - - four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
73. CU695006.1 CU695006.1 4 1 - - - - - - 1.000 - -
74. XCR1 XCR1 9 1 - - - - - - 1.000 - -
75. WIPF1 WIPF1 32 1 - - - - - - 1.000 - -
76. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1 - - - - - - 1.000 - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
77. asb2a_1 asb2a_1 6 1 - - - - - - 1.000 - -
78. cacng5a ENSDARG00000003326 17 1 - - - - - - 1.000 - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
79. BX572077.3 BX572077.3 20 1 - - - - - - 1.000 - -
80. prom1b ENSDARG00000034007, ENSDARG00000111216, ENSDARG00000111262 14 1 - - - - - - 1.000 - - prominin 1 b [Source:ZFIN;Acc:ZDB-GENE-031003-1]
81. si:dkey-279j5.1 ENSDARG00000101459 17 1 - - - - - - 1.000 - - si:dkey-279j5.1 [Source:ZFIN;Acc:ZDB-GENE-120703-27]
82. CT027682.3 CT027682.3 0 1 - - - - - - 1.000 - -
83. PFKL PFKL 9 1 - - - - 1.000 - - - -
84. CABZ01048021.1 CABZ01048021.1 15 1 - - - - - - 1.000 - -
85. socs1a ENSDARG00000038095 20 1 - - - - - - 1.000 - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
86. myd88 ENSDARG00000010169 86 1 - - - - - - 1.000 - - myeloid differentiation primary response 88 [Source:ZFIN;Acc:ZDB-GENE-040219-3]
87. tnni2a.1 ENSDARG00000045592 15 1 - - - - - - 1.000 - - troponin I type 2a (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041114-60]
88. UBAC2_1 UBAC2_1 23 1 - - - - - - 1.000 - -
89. kcnj1a.2 ENSDARG00000090866 8 1 - - - - - - 1.000 - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050327-22]
90. cyp1c2 ENSDARG00000101789 3 1 - - - - - - 1.000 - - cytochrome P450, family 1, subfamily C, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050705-1]
91. prpf3_1 ENSDARG00000086425, ENSDARG00000116776 84 1 - - - - - - 1.000 - - PRP3 pre-mRNA processing factor 3 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040823-3]
92. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 1 - - - - - - 1.000 - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
93. fam151a ENSDARG00000058218 40 1 - - - - - - 1.000 - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
94. CT025887.1 ENSDARG00000114574 1 1 - - - - - - 1.000 - - uncharacterized LOC110440185 [Source:NCBI gene;Acc:110440185]
95. klhl24 klhl24 40 1 - - - - - - 1.000 - -
96. chrna9 ENSDARG00000054680 4 1 - - - - - - 1.000 - - cholinergic receptor, nicotinic, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-090312-63]
97. si:dkey-1j5.4 ENSDARG00000073747 1 1 - - - - - - 1.000 - - si:dkey-1j5.4 [Source:ZFIN;Acc:ZDB-GENE-130603-91]
98. si:dkey-57b6.4 si:dkey-57b6.4 3 1 - - - - - - 1.000 - -
99. CU467646.3 ENSDARG00000099076 36 1 - - - - - - 1.000 - - mucin-2-like [Source:NCBI gene;Acc:108179180]
100. kcnab1 kcnab1 10 1 - - - - - - 1.000 - -

There are 413 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA