Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for msl2a

Gene Name Gene ID Reads Annotation
msl2a ENSDARG00000038909 1357 male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]










Genes with expression patterns similar to msl2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. msl2a ENSDARG00000038909 1357 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
2. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 3.074 - - - - 0.811 - 0.701 0.724 0.838 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
3. marcksa ENSDARG00000004049 2518 3.068 - - - - - 0.805 0.767 0.710 0.786 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
4. tmpob ENSDARG00000022978 8121 3.062 0.793 - - - - 0.709 0.838 - 0.722 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
5. tcea1 ENSDARG00000003531 2912 3.034 - - - 0.735 - 0.748 0.769 - 0.782 transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
6. si:ch211-202e12.3 401 3.019 - - - - - 0.789 0.736 0.771 0.723 si:ch211-202e12.3, transcript variant X6
7. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 3.005 - - - - 0.732 0.737 0.796 0.740 - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
8. nrarpb ENSDARG00000018958 6225 3.003 - - - 0.724 - 0.801 0.770 - 0.708 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
9. tuba1c ENSDARG00000055216 8384 2.98 - - - - 0.742 0.758 0.709 - 0.771 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
10. nbeaa ENSDARG00000070080 862 2.956 - - 0.705 - - - 0.707 0.771 0.773 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
11. gap43 ENSDARG00000099744 4114 2.944 - - - - - 0.768 0.723 0.704 0.749 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
12. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 2.853 - - - - - 0.727 0.707 0.701 0.718 cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
13. hnrnpub ENSDARG00000004735 16496 2.443 - - - - - 0.779 0.843 - 0.821 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
14. CYTH2 ENSDARG00000028800 2349 2.433 - - - - - 0.717 0.908 - 0.808 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
15. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.428 - - - - - 0.775 0.895 - 0.758 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
16. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.427 - - - 0.806 - 0.810 0.811 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
17. sema6a ENSDARG00000102165 1401 2.426 - - - - - 0.844 0.791 - 0.791 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
18. hmgb3a ENSDARG00000056725 15668 2.394 - - - - - 0.861 0.800 - 0.733 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
19. relnl relnl 863 2.383 0.819 - - - - 0.802 0.762 - -
20. fzd3a ENSDARG00000021664 1958 2.383 - - - - - 0.786 0.822 - 0.775 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
21. zgc:174906 ENSDARG00000075314 2187 2.375 - - - 0.785 - 0.785 0.805 - - zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
22. tgif1 ENSDARG00000059337 4020 2.375 - - - 0.777 - - 0.828 - 0.770 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
23. tmem35 ENSDARG00000052567 5685 2.372 - - - - - 0.805 0.777 - 0.790 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
24. zswim5 ENSDARG00000055900 4243 2.367 - - - - - 0.848 0.736 - 0.783 zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
25. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.36 - - - - - 0.758 0.838 - 0.764 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
26. pcdh19 ENSDARG00000034344 2378 2.355 - - - - - 0.834 0.721 - 0.800 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
27. hmgb1b ENSDARG00000030479 10398 2.353 - - 0.731 - - 0.837 0.785 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
28. celf3a ENSDARG00000034668 2432 2.345 - - - - - 0.813 0.737 - 0.795 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
29. ptprna ENSDARG00000058646 1327 2.338 - - - - 0.736 0.817 0.785 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
30. nova2 ENSDARG00000017673 7685 2.333 - - - 0.712 - 0.814 0.807 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
31. CABZ01088330.1 CABZ01088330.1 679 2.324 0.709 - - - - 0.850 0.765 - -
32. TUBA1A ENSDARG00000001889 25294 2.323 - - - 0.710 - 0.822 0.791 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
33. arnt2 ENSDARG00000103697 5731 2.323 - - - - - 0.837 0.776 - 0.710 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
34. AGO1 ENSDARG00000092644 4521 2.317 - - - - - 0.804 0.778 - 0.735 argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
35. ZFHX3 ENSDARG00000103057 7759 2.316 0.781 - - - - 0.758 0.777 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
36. sumo3a ENSDARG00000028119 13447 2.309 - - - - - 0.817 0.741 - 0.751 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
37. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.295 - - - 0.718 - - 0.761 - 0.816 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
38. ddx19 ENSDARG00000005699 4602 2.29 - - - - - 0.791 0.738 - 0.761 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
39. nes ENSDARG00000088805 2710 2.286 - - - - 0.735 0.787 0.764 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
40. wfikkn2a ENSDARG00000013460 859 2.281 - - - - - 0.759 0.768 - 0.754 info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-120914-1]
41. ptprnb ENSDARG00000077047 2743 2.279 - - 0.770 - - 0.802 0.707 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
42. rtn1b ENSDARG00000021143 1682 2.277 - - - - - 0.715 0.782 - 0.780 reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
43. snrpd3l ENSDARG00000076283 7655 2.276 - - - - - 0.723 0.740 - 0.813 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
44. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.276 - - - 0.751 - - 0.747 - 0.778 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
45. fam60al 2846 2.275 - - - 0.765 - 0.766 - - 0.744 family with sequence similarity 60, member A, like
46. rbm25 rbm25 3629 2.274 - - - - - 0.817 0.739 - 0.718
47. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.27 0.704 - - - - 0.813 0.753 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
48. CABZ01111990.1 CABZ01111990.1 4374 2.268 - - - - - 0.756 0.739 0.773 -
49. whsc1l1 8544 2.267 - - - - - 0.812 0.704 - 0.751 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
50. grin1a ENSDARG00000027828 1327 2.267 - 0.773 - - - 0.737 0.757 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
51. vezf1a ENSDARG00000008247 1449 2.264 - - - - - 0.736 0.822 - 0.706 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
52. scocb ENSDARG00000002217 1844 2.262 - - - - - 0.766 0.781 0.715 - short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
53. tshz1 ENSDARG00000005026 1948 2.261 0.702 - - - - 0.704 0.855 - - teashirt zinc finger homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030820-3]
54. ncana 1537 2.26 - - - 0.711 - 0.730 0.819 - - neurocan a
55. PACS1_1 PACS1_1 1264 2.258 - - - - - 0.801 0.727 0.730 -
56. uhrf1 ENSDARG00000103409 3282 2.255 - - - 0.734 0.746 0.775 - - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
57. rap2ip rap2ip 681 2.247 - - - - - 0.783 0.753 - 0.711
58. elavl3 ENSDARG00000014420 8644 2.241 - - - - - 0.768 0.740 0.733 - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
59. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.225 - 0.732 - - - - 0.745 - 0.748 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
60. tox ENSDARG00000032317 9126 2.222 - - - - - 0.702 0.735 - 0.785 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
61. kif22 ENSDARG00000102624 3694 2.217 - - - - - 0.716 0.755 - 0.746 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
62. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.216 - - - - - 0.738 0.769 - 0.709 G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
63. rcor2 ENSDARG00000008278 1678 2.202 - - - - - 0.706 0.737 0.759 - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
64. mllt11 ENSDARG00000071026 2518 2.201 - - - - - 0.737 0.708 - 0.756 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
65. u2af1 ENSDARG00000015325 3217 2.192 - - - - - 0.721 - 0.726 0.745 U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
66. ssbp4 ENSDARG00000056483 10196 2.191 - - - - - 0.707 0.754 0.730 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
67. st18 663 2.181 - - - - - 0.705 0.773 0.703 - suppression of tumorigenicity 18, zinc finger
68. SPOCK1 ENSDARG00000074644 794 2.178 - - - - - 0.710 0.739 - 0.729 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
69. her4.3 ENSDARG00000070770 613 2.174 - - - - - 0.733 0.725 - 0.716 hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
70. chd7 ENSDARG00000075211 12085 2.174 - - - - - 0.717 0.739 0.718 - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
71. her4.1 ENSDARG00000056732 1264 2.167 - - - - 0.715 0.729 0.723 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
72. coe2 coe2 1633 2.16 - - - - - 0.705 - 0.755 0.700
73. gad2 ENSDARG00000015537 724 2.152 - - - - - 0.706 0.736 0.710 - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
74. dut ENSDARG00000106529 3120 2.148 0.710 - - 0.702 - - 0.736 - - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
75. AKT3 AKT3 1729 2.14 - - - 0.701 - 0.718 0.721 - -
76. creb1a ENSDARG00000053586 5068 1.673 - - - - - 0.859 - - 0.814 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
77. cbx1b ENSDARG00000054442 1206 1.665 - - - - - 0.824 0.841 - - chromobox homolog 1b (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040625-68]
78. b4galt2 ENSDARG00000077994 480 1.662 - - - - - 0.801 0.861 - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-070912-258]
79. hoxa9b ENSDARG00000056819 3081 1.661 - - - - - 0.845 0.816 - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
80. chat chat 463 1.644 - - - - - 0.881 0.763 - -
81. aatkb ENSDARG00000104442 392 1.642 - 0.829 - - - - 0.813 - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
82. CDK5R1 CDK5R1 562 1.64 - - - - - 0.830 0.810 - -
83. pdzrn4 ENSDARG00000045687 362 1.638 - - - - - 0.865 0.773 - - PDZ domain containing ring finger 4 [Source:ZFIN;Acc:ZDB-GENE-041210-237]
84. smc1al ENSDARG00000058203 8838 1.638 - - - - - 0.846 - - 0.792 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
85. vim ENSDARG00000010008 3551 1.635 - - - - - 0.824 0.811 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
86. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.633 - - - - - 0.755 0.878 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
87. CABZ01115322.1 CABZ01115322.1 1283 1.63 - - - - - 0.805 0.825 - -
88. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.624 - - - - - 0.811 0.813 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
89. nup205 ENSDARG00000042530, ENSDARG00000114489 2255 1.622 - - - - - 0.800 0.822 - - nucleoporin 205 [Source:ZFIN;Acc:ZDB-GENE-040715-8]
90. tle2 5014 1.621 - - - - 0.741 - 0.880 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
91. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 1.614 - - - - - 0.832 0.782 - - contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
92. TMEM57 TMEM57 260 1.612 - 0.829 - - - - - - 0.783
93. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.61 - - - - - 0.851 0.759 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
94. sall1a ENSDARG00000074319, ENSDARG00000111696 1486 1.61 - - - - - 0.840 0.770 - - spalt-like transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020228-2]
95. pou3f3a ENSDARG00000042032 2835 1.61 - - - - - 0.821 0.789 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
96. lamb2l ENSDARG00000033950 952 1.61 - - - 0.747 - - 0.863 - - laminin, beta 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-4205]
97. slc1a3a ENSDARG00000104431 9888 1.607 - - - - - 0.758 0.849 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
98. si:dkey-251i10.2 ENSDARG00000093957 4424 1.604 - 0.857 - - - - 0.747 - - si:dkey-251i10.2 [Source:ZFIN;Acc:ZDB-GENE-050506-102]
99. CU928222.1 ENSDARG00000097436 1662 1.603 - - - - - 0.816 0.787 - -
100. atp6v0cb ENSDARG00000036577 3472 1.597 - - - - - 0.814 0.783 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]

There are 1591 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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