Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for msi2a

Gene Name Gene ID Reads Annotation
msi2a ENSDARG00000033901, ENSDARG00000114442 256 musashi RNA-binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030826-25]










Genes with expression patterns similar to msi2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. msi2a ENSDARG00000033901, ENSDARG00000114442 256 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 musashi RNA-binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030826-25]
2. tsen2 ENSDARG00000091851 1467 1.871 - - - - - - 0.932 0.939 - TSEN2 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-060929-918]
3. CR354432.1 CR354432.1 424 1.78 - 0.875 - - - - - 0.905 -
4. C5H9orf117 C5H9orf117 88 1.753 0.869 - - - - - 0.884 - -
5. PIK3R6 PIK3R6 149 1.712 0.768 - - - - - - 0.944 -
6. tmem168a ENSDARG00000068705 498 1.706 - 0.876 - - - - - 0.830 - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
7. zgc:153292 ENSDARG00000070458, ENSDARG00000112223 134 1.694 - - - - - 0.741 - 0.953 - zgc:153292 [Source:ZFIN;Acc:ZDB-GENE-060929-1098]
8. tmem141 ENSDARG00000101963 513 1.679 - 0.780 - - - - - 0.899 - transmembrane protein 141 [Source:ZFIN;Acc:ZDB-GENE-060929-272]
9. CABZ01068246.1 ENSDARG00000114719 353 1.67 - 0.751 - - - - - 0.919 -
10. si:dkey-173l11.3 si:dkey-173l11.3 14 1.653 - 0.870 - - - - 0.783 - -
11. DHRS7C DHRS7C 363 1.626 - - - - - 0.701 - 0.925 -
12. gosr2 ENSDARG00000053070 944 1.618 - 0.711 - - - - - 0.907 - golgi SNAP receptor complex member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3290]
13. bag4 ENSDARG00000043179 568 1.612 - 0.731 - - - - - 0.881 - BCL2 associated athanogene 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5484]
14. TNFRSF11B ENSDARG00000098377 98 1.606 - 0.861 - - - - 0.745 - - tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]
15. timmdc1 ENSDARG00000053466 2179 1.592 0.729 0.863 - - - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-369]
16. CABZ01024770.1 CABZ01024770.1 150 1.578 0.824 0.754 - - - - - - -
17. gfra2a ENSDARG00000042723 592 1.54 - - - - - - 0.714 0.826 - GDNF family receptor alpha 2a [Source:ZFIN;Acc:ZDB-GENE-040630-1]
18. CZv9_NA429H14orf28 CZv9_NA429H14orf28 157 1.537 - - - - 0.717 - 0.820 - -
19. si:dkey-104n9.1 ENSDARG00000093042 41 1.507 - - - - - 0.724 0.783 - - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
20. MYO7B MYO7B 8 1.503 - - - - - 0.720 0.783 - -
21. med16 ENSDARG00000040779, ENSDARG00000116309 939 1.498 - 0.787 - - - - 0.711 - - mediator complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-090306-4]
22. spata4_1 ENSDARG00000036189, ENSDARG00000114468 39 1.447 - - - - - 0.720 0.727 - - spermatogenesis associated 4 [Source:ZFIN;Acc:ZDB-GENE-050417-153]
23. si:ch211-212k5.2 si:ch211-212k5.2 152 0.976 - - - - - - 0.976 - -
24. CABZ01067945.1 CABZ01067945.1 469 0.968 - - - - - - - 0.968 -
25. si:ch73-61d6.3 ENSDARG00000057826 274 0.965 - - - - - - - 0.965 - si:ch73-61d6.3 [Source:ZFIN;Acc:ZDB-GENE-091204-109]
26. npb ENSDARG00000078828 230 0.963 - - - - - - - 0.963 - neuropeptide B [Source:ZFIN;Acc:ZDB-GENE-040107-40]
27. C9H2orf69 C9H2orf69 148 0.963 - - - - - - - 0.963 -
28. FP102801.1_1 FP102801.1_1 238 0.962 - - - - - - - 0.962 -
29. kcnk9 ENSDARG00000104563 92 0.962 - - - - - - - 0.962 - potassium channel, subfamily K, member 9 [Source:ZFIN;Acc:ZDB-GENE-070705-260]
30. rpp30 ENSDARG00000027428 286 0.961 - - - - - - - 0.961 - ribonuclease P/MRP 30 subunit [Source:ZFIN;Acc:ZDB-GENE-050320-45]
31. gdap1l1 ENSDARG00000028628 233 0.96 - - - - - - - 0.960 - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
32. ADCYAP1R1 ADCYAP1R1 118 0.959 - - - - - - - 0.959 -
33. CABZ01088365.1 CABZ01088365.1 66 0.958 - - - - - - - 0.958 -
34. CABZ01041962.1 ENSDARG00000076082 690 0.958 - - - - - - - 0.958 - uncharacterized LOC798124 [Source:NCBI gene;Acc:798124]
35. zgc:113336 ENSDARG00000104078 147 0.958 - - - - - - - 0.958 - zgc:113336 [Source:ZFIN;Acc:ZDB-GENE-050320-55]
36. rxfp2b ENSDARG00000019660 464 0.957 - - - - - - - 0.957 - relaxin family peptide receptor 2b [Source:ZFIN;Acc:ZDB-GENE-110408-27]
37. mapk4 ENSDARG00000017681, ENSDARG00000110581 303 0.957 - - - - - - - 0.957 - mitogen-activated protein kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2835]
38. gli2b ENSDARG00000020884 1468 0.956 - - - - - - - 0.956 - GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
39. PARP6_1 PARP6_1 331 0.956 - - - - - - - 0.956 -
40. srrm2 ENSDARG00000037965 1967 0.956 - - - - - - - 0.956 - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
41. C22H19orf44 C22H19orf44 481 0.956 - - - - - - - 0.956 -
42. ccdc41 ccdc41 97 0.954 - - - - - - - 0.954 -
43. FGD5 FGD5 250 0.954 - - - - - - - 0.954 -
44. pigm ENSDARG00000024277 86 0.954 - - - - - - - 0.954 - phosphatidylinositol glycan anchor biosynthesis, class M [Source:ZFIN;Acc:ZDB-GENE-040426-1393]
45. rad9a ENSDARG00000056984, ENSDARG00000115514 152 0.953 - - - - - - - 0.953 - RAD9 checkpoint clamp component A [Source:ZFIN;Acc:ZDB-GENE-040426-935]
46. si:ch211-233h19.2 ENSDARG00000042213 47 0.953 - - - - - - - 0.953 - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
47. CR848025.1 ENSDARG00000100501 35 0.953 - - - - - - - 0.953 - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
48. ZNF76 ENSDARG00000013279 260 0.953 - - - - - - - 0.953 - zinc finger protein 76 [Source:ZFIN;Acc:ZDB-GENE-061027-379]
49. si:dkey-10c21.1 ENSDARG00000079133 32 0.953 - - - - - - - 0.953 - si:dkey-10c21.1 [Source:ZFIN;Acc:ZDB-GENE-081104-302]
50. pak1ip1 ENSDARG00000044488 1995 0.953 - - - - - - - 0.953 - PAK1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8414]
51. zpcx ENSDARG00000059252, ENSDARG00000111002 33 0.952 - - - - - - - 0.952 - zona pellucida protein C [Source:ZFIN;Acc:ZDB-GENE-040824-1]
52. fancg ENSDARG00000024967, ENSDARG00000113462 82 0.952 - - - - - - - 0.952 - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
53. wdr76 ENSDARG00000053554, ENSDARG00000115151 813 0.952 - - - - - - - 0.952 - WD repeat domain 76 [Source:ZFIN;Acc:ZDB-GENE-030131-4513]
54. si:ch211-218m3.16 ENSDARG00000044336 33 0.952 - - - - - - - 0.952 - si:ch211-218m3.16 [Source:ZFIN;Acc:ZDB-GENE-091116-19]
55. CABZ01032488.1 ENSDARG00000099154 262 0.952 - - - - - - - 0.952 - wu:fb14d09 [Source:NCBI gene;Acc:100536795]
56. MSH4 ENSDARG00000075826 37 0.952 - - - - - - - 0.952 - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
57. GIPR ENSDARG00000025478 87 0.952 - - - - - - - 0.952 - gastric inhibitory polypeptide receptor [Source:ZFIN;Acc:ZDB-GENE-050516-4]
58. tbc1d10a tbc1d10a 462 0.952 - - - - - - - 0.952 -
59. CR388228.1 ENSDARG00000117809 31 0.952 - - - - - - - 0.952 - uncharacterized LOC110437756 [Source:NCBI gene;Acc:110437756]
60. fbxl20 ENSDARG00000075567 138 0.952 - - - - - - - 0.952 - F-box and leucine-rich repeat protein 20 [Source:ZFIN;Acc:ZDB-GENE-081031-27]
61. si:dkey-242e21.3 ENSDARG00000075723 77 0.952 - - - - - - - 0.952 - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
62. si:ch211-173p18.3_1 ENSDARG00000035821 36 0.952 - - - - - - - 0.952 - si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
63. dnase1 ENSDARG00000012539 65 0.952 - - - - - - - 0.952 - deoxyribonuclease I [Source:ZFIN;Acc:ZDB-GENE-040718-423]
64. meiob 75 0.952 - - - - - - - 0.952 - meiosis specific with OB domains
65. si:dkeyp-87d1.1 ENSDARG00000104681 35 0.952 - - - - - - - 0.952 - si:dkeyp-87d1.1 [Source:ZFIN;Acc:ZDB-GENE-041014-75]
66. nitr3a_1 ENSDARG00000110676 44 0.951 - - - - - - - 0.951 - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
67. si:dkey-11f4.20 ENSDARG00000100887 38 0.951 - - - - - - - 0.951 - si:dkey-11f4.20 [Source:ZFIN;Acc:ZDB-GENE-070912-359]
68. megf8_1 ENSDARG00000079751, ENSDARG00000103934 722 0.951 - - - - - - - 0.951 - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
69. si:ch211-193e13.5 ENSDARG00000052656 61 0.95 - - - - - - - 0.950 - si:ch211-193e13.5 [Source:ZFIN;Acc:ZDB-GENE-081104-158]
70. pnp5b ENSDARG00000099802 551 0.95 - - - - - - - 0.950 - purine nucleoside phosphorylase 5b [Source:ZFIN;Acc:ZDB-GENE-040912-54]
71. CR847543.1 ENSDARG00000086708 155 0.95 - - - - - - - 0.950 -
72. si:dkey-9i5.1 si:dkey-9i5.1 36 0.95 - - - - - - - 0.950 -
73. htr3b ENSDARG00000061749 49 0.95 - - - - - - - 0.950 - 5-hydroxytryptamine (serotonin) receptor 3B [Source:ZFIN;Acc:ZDB-GENE-071012-4]
74. pou2f2b pou2f2b 134 0.95 - - - - - - - 0.950 -
75. nr3c2 ENSDARG00000102082, ENSDARG00000115513 122 0.95 - - - - - - - 0.950 - nuclear receptor subfamily 3, group C, member 2 [Source:ZFIN;Acc:ZDB-GENE-060531-23]
76. si:dkeyp-27e10.6 si:dkeyp-27e10.6 36 0.949 - - - - - - - 0.949 -
77. rraga ENSDARG00000104149 515 0.949 - - - - - - - 0.949 - Ras-related GTP binding A [Source:ZFIN;Acc:ZDB-GENE-030131-4083]
78. camk1da ENSDARG00000074905, ENSDARG00000111604 479 0.949 - - - - - - - 0.949 - calcium/calmodulin-dependent protein kinase 1Da [Source:ZFIN;Acc:ZDB-GENE-080402-7]
79. mecr ENSDARG00000032326 314 0.948 - - - - - - - 0.948 - mitochondrial trans-2-enoyl-CoA reductase [Source:ZFIN;Acc:ZDB-GENE-050417-399]
80. rasl10a ENSDARG00000062314 207 0.948 - - - - - - - 0.948 - RAS-like, family 10, member A [Source:ZFIN;Acc:ZDB-GENE-060526-273]
81. si:dkey-97a13.9 si:dkey-97a13.9 169 0.947 - - - - - - - 0.947 -
82. scpp8 ENSDARG00000093124 54 0.946 - - - - - - - 0.946 - secretory calcium-binding phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-090424-2]
83. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 0.946 - - - - - - - 0.946 - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
84. TRIM67 ENSDARG00000108787 290 0.946 - - - - - - - 0.946 - tripartite motif containing 67 [Source:HGNC Symbol;Acc:HGNC:31859]
85. si:dkey-6n6.2 ENSDARG00000058032 1186 0.946 - - - - - - - 0.946 - si:dkey-6n6.2 [Source:ZFIN;Acc:ZDB-GENE-060503-173]
86. nmu ENSDARG00000043299 67 0.945 - - - - - - - 0.945 - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
87. uncx4.1 ENSDARG00000037760 472 0.945 - - - - - - - 0.945 - Unc4.1 homeobox (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050714-1]
88. manea ENSDARG00000001898 450 0.944 - - - - - - - 0.944 - mannosidase, endo-alpha [Source:ZFIN;Acc:ZDB-GENE-040912-87]
89. pard6b ENSDARG00000003865 990 0.944 - - - - - - - 0.944 - par-6 partitioning defective 6 homolog beta (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-090312-133]
90. RFC4 ENSDARG00000042458 3694 0.944 - - - - - - - 0.944 - replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
91. APBA3 APBA3 852 0.942 - - - - - - - 0.942 -
92. astn1 ENSDARG00000068323 348 0.941 - - - - - - - 0.941 - astrotactin 1 [Source:ZFIN;Acc:ZDB-GENE-050320-140]
93. myo6a ENSDARG00000044016 847 0.941 - - - - - - - 0.941 - myosin VIa [Source:ZFIN;Acc:ZDB-GENE-040819-2]
94. calca ENSDARG00000056590 150 0.941 - - - - - - - 0.941 - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
95. asb16 ENSDARG00000056468, ENSDARG00000110292 126 0.94 - - - - - - - 0.940 - ankyrin repeat and SOCS box containing 16 [Source:ZFIN;Acc:ZDB-GENE-031031-3]
96. C3H19orf52 C3H19orf52 541 0.94 - - - - - - - 0.940 -
97. si:ch73-108h4.3 si:ch73-108h4.3 193 0.94 - - - - - - - 0.940 -
98. gnb1a ENSDARG00000090454 481 0.939 - - - - - - - 0.939 - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
99. calb1 ENSDARG00000031598 252 0.939 - - - - - - - 0.939 - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
100. ROBO3_1 ROBO3_1 468 0.938 - - - - - - - 0.938 -

There are 1205 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA