Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for msh6

Gene Name Gene ID Reads Annotation
msh6 ENSDARG00000104541 197 mutS homolog 6 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-020905-3]










Genes with expression patterns similar to msh6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. msh6 ENSDARG00000104541 197 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mutS homolog 6 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-020905-3]
2. zgc:174862 ENSDARG00000077571 201 1.734 0.734 - - - - 1.000 - - - zgc:174862 [Source:ZFIN;Acc:ZDB-GENE-080303-29]
3. zgc:92275 ENSDARG00000034048 9 1.703 - - - - - 1.000 0.703 - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
4. pappab ENSDARG00000059858 11 1.703 - - - - - 1.000 0.703 - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
5. foxg1c ENSDARG00000068380, ENSDARG00000114414 25 1.605 0.774 - - - - - 0.831 - - forkhead box G1c [Source:ZFIN;Acc:ZDB-GENE-050419-26]
6. MYL4 ENSDARG00000011519 309 1.545 0.722 - - - - - 0.823 - - myosin, light chain 4, alkali; atrial, embryonic [Source:ZFIN;Acc:ZDB-GENE-050626-112]
7. ENSDARG00000090150 ENSDARG00000090150 966 1.534 - 0.807 - - - - 0.727 - -
8. RBPMS ENSDARG00000099396 61 1.509 0.740 - - - 0.769 - - - - RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
9. fam58a 423 1.5 0.762 0.738 - - - - - - - family with sequence similarity 58, member A, transcript variant X1
10. slc25a23b ENSDARG00000024708 51 1.488 - 0.702 - - - - 0.786 - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23b [Source:ZFIN;Acc:ZDB-GENE-040724-220]
11. si:dkey-30c15.9 si:dkey-30c15.9 4 1.477 0.774 - - - - - 0.703 - -
12. tmem59l ENSDARG00000003655 1536 1.463 0.703 0.760 - - - - - - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
13. KHDRBS3 ENSDARG00000101020 408 1.459 - - - - 0.733 - 0.726 - - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
14. si:ch211-51h9.7 ENSDARG00000074720 227 1.446 - - - - 0.745 0.701 - - - si:ch211-51h9.7 [Source:ZFIN;Acc:ZDB-GENE-081104-235]
15. tceanc2 ENSDARG00000062919 32 1.437 0.734 - - - - - 0.703 - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
16. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 1.437 0.734 - - - - - 0.703 - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
17. deptor ENSDARG00000040930 191 1.41 - 0.709 - - 0.701 - - - - DEP domain containing MTOR-interacting protein [Source:ZFIN;Acc:ZDB-GENE-061013-453]
18. EPB41L2 ENSDARG00000093374 7 1 - - - - - 1.000 - - - erythrocyte membrane protein band 4.1 like 2 [Source:HGNC Symbol;Acc:HGNC:3379]
19. CR391998.1 ENSDARG00000091817 15 1 - - - - - 1.000 - - - putative protein TPRXL [Source:NCBI gene;Acc:101882255]
20. mbnl3 ENSDARG00000016085 6 1 - - - - - 1.000 - - - muscleblind-like splicing regulator 3 [Source:ZFIN;Acc:ZDB-GENE-081002-3]
21. cbln8 ENSDARG00000019294 0 1 - - - - - 1.000 - - - cerebellin 8 [Source:ZFIN;Acc:ZDB-GENE-080204-13]
22. PAQR8 ENSDARG00000088828 26 1 - - - - - 1.000 - - - progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
23. si:rp71-68n21.9 ENSDARG00000067751 7 1 - - - - - 1.000 - - - si:rp71-68n21.9 [Source:ZFIN;Acc:ZDB-GENE-081105-100]
24. si:dkeyp-67e1.6 ENSDARG00000073947, ENSDARG00000113513, ENSDARG00000113783 20 1 - - - - - 1.000 - - - si:dkeyp-67e1.6 [Source:ZFIN;Acc:ZDB-GENE-061207-87]
25. ftr42 4 1 - - - - - 1.000 - - - finTRIM family, member 42
26. MYO15B ENSDARG00000074852 6 1 - - - - - 1.000 - - - myosin XVB [Source:ZFIN;Acc:ZDB-GENE-030131-4797]
27. si:dkeyp-53e4.3 si:dkeyp-53e4.3 0 1 - - - - - 1.000 - - -
28. si:dkey-121j17.5 ENSDARG00000014232 18 1 - - - - - 1.000 - - - si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
29. si:ch211-63o20.10 13 1 - - - - - 1.000 - - - si:ch211-63o20.10
30. aicda ENSDARG00000015734 3 1 - - - - - 1.000 - - - activation-induced cytidine deaminase [Source:ZFIN;Acc:ZDB-GENE-041122-2]
31. CABZ01067727.1 CABZ01067727.1 2 1 - - - - - 1.000 - - -
32. si:ch211-53m15.1 si:ch211-53m15.1 28 1 - - - - - 1.000 - - -
33. si:ch211-278p9.2 ENSDARG00000095274 0 1 - - - - - 1.000 - - - si:ch211-278p9.2 [Source:ZFIN;Acc:ZDB-GENE-081028-37]
34. pla2g15 ENSDARG00000103271 4 1 - - - - - 1.000 - - - phospholipase A2, group XV [Source:ZFIN;Acc:ZDB-GENE-030131-6948]
35. slc23a3 ENSDARG00000088891 47 1 - - - - - 1.000 - - - solute carrier family 23, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-714]
36. H2AFX_1 H2AFX_1 28 1 - - - - - 1.000 - - -
37. ptprq ENSDARG00000008849 3 1 - - - - - 1.000 - - - protein tyrosine phosphatase, receptor type, Q [Source:ZFIN;Acc:ZDB-GENE-050419-183]
38. pdgfrb ENSDARG00000100897 0 1 - - - - - 1.000 - - - platelet-derived growth factor receptor, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030805-2]
39. CT868708.1 ENSDARG00000097601 2 1 - - - - - 1.000 - - -
40. CR387932.1 ENSDARG00000097344 2 1 - - - - - 1.000 - - -
41. LRRTM4 2 1 - - - - - 1.000 - - - leucine rich repeat transmembrane neuronal 4
42. crygm2a ENSDARG00000057536 1 1 - - - - - 1.000 - - - crystallin, gamma M2a [Source:ZFIN;Acc:ZDB-GENE-050516-9]
43. CABZ01049058.1 CABZ01049058.1 7 1 - - - - - 1.000 - - -
44. CU550716.4 CU550716.4 14 1 - - - - - 1.000 - - -
45. slc15a1a ENSDARG00000100315 23 1 - - - - - 1.000 - - - solute carrier family 15 (oligopeptide transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-091204-9]
46. si:ch211-272h9.2 si:ch211-272h9.2 1 1 - - - - - 1.000 - - -
47. si:ch211-203b20.4 ENSDARG00000091790 3 1 - - - - - 1.000 - - - si:ch211-203b20.4 [Source:ZFIN;Acc:ZDB-GENE-060503-208]
48. fgf22 ENSDARG00000076510, ENSDARG00000114053, ENSDARG00000115407 3 1 - - - - - 1.000 - - - fibroblast growth factor 22 [Source:ZFIN;Acc:ZDB-GENE-050208-380]
49. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1 - - - - - 1.000 - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
50. zgc:154125 ENSDARG00000071463 7 1 - - - - - 1.000 - - - zgc:154125 [Source:ZFIN;Acc:ZDB-GENE-061013-717]
51. valopb ENSDARG00000054181, ENSDARG00000110871 2 1 - - - - - 1.000 - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
52. CR749167.1 ENSDARG00000100165 38 1 - - - - - 1.000 - - -
53. si:ch211-193e5.3 si:ch211-193e5.3 0 1 - - - - - 1.000 - - -
54. foxe1 ENSDARG00000079266 6 1 - - - - - 1.000 - - - forkhead box E1 [Source:ZFIN;Acc:ZDB-GENE-061116-1]
55. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 1 - - - - - 1.000 - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
56. si:dkey-93m18.3 ENSDARG00000092664 30 1 - - - - - 1.000 - - - si:dkey-93m18.3 [Source:ZFIN;Acc:ZDB-GENE-091204-346]
57. fubp3 ENSDARG00000086896 21 1 - - - - - 1.000 - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
58. BX248496.1 BX248496.1 0 1 - - - - - 1.000 - - -
59. gsc ENSDARG00000059073, ENSDARG00000111184, ENSDARG00000115937 152 1 - - - - - 1.000 - - - goosecoid [Source:ZFIN;Acc:ZDB-GENE-980528-2060]
60. GPR113 GPR113 0 1 - - - - - 1.000 - - -
61. si:dkey-162h11.3 41 1 - - - - - 1.000 - - - si:dkey-162h11.3, transcript variant X2
62. RAB37 RAB37 0 1 - - - - - 1.000 - - -
63. igfbp6b ENSDARG00000090833 37 1 - - - - - 1.000 - - - insulin-like growth factor binding protein 6b [Source:ZFIN;Acc:ZDB-GENE-090521-2]
64. zgc:136872 ENSDARG00000008553 9 1 - - - - - 1.000 - - - zgc:136872 [Source:ZFIN;Acc:ZDB-GENE-060421-5204]
65. HYKK_1 HYKK_1 4 1 - - - - - 1.000 - - -
66. GPR26 ENSDARG00000074389, ENSDARG00000116243 21 1 - - - - - 1.000 - - - G protein-coupled receptor 26 [Source:ZFIN;Acc:ZDB-GENE-131121-131]
67. USH1G USH1G 25 1 - - - - - 1.000 - - -
68. si:ch73-27e22.5 si:ch73-27e22.5 10 1 - - - - - 1.000 - - -
69. PEG3_17 PEG3_17 15 1 - - - - - 1.000 - - -
70. slco1f4 ENSDARG00000101014 0 1 - - - - - 1.000 - - - solute carrier organic anion transporter family, member 1F4 [Source:ZFIN;Acc:ZDB-GENE-070112-2172]
71. phox2ba ENSDARG00000075330 1 1 - - - - - 1.000 - - - paired-like homeobox 2ba [Source:ZFIN;Acc:ZDB-GENE-090313-51]
72. ftr19 ENSDARG00000094131 0 1 - - - - - 1.000 - - - finTRIM family, member 19 [Source:ZFIN;Acc:ZDB-GENE-090506-5]
73. CCDC150 CCDC150 991 1 - - - - - 1.000 - - -
74. cx30.9 ENSDARG00000070362 17 1 - - - - - 1.000 - - - connexin 30.9 [Source:ZFIN;Acc:ZDB-GENE-050616-2]
75. si:ch211-249h16.8 ENSDARG00000093630 1 1 - - - - - 1.000 - - - si:ch211-249h16.8 [Source:ZFIN;Acc:ZDB-GENE-090311-36]
76. si:ch211-285c6.1 ENSDARG00000076257 2 1 - - - - - 1.000 - - - si:ch211-285c6.1 [Source:ZFIN;Acc:ZDB-GENE-041001-89]
77. si:dkeyp-35e5.9 ENSDARG00000103527 24 1 - - - - - 1.000 - - - si:dkeyp-35e5.9 [Source:ZFIN;Acc:ZDB-GENE-110913-107]
78. tmem174 ENSDARG00000035388 2 1 - - - - - 1.000 - - - transmembrane protein 174 [Source:ZFIN;Acc:ZDB-GENE-080819-2]
79. FP236162.1 FP236162.1 2 1 - - - - - 1.000 - - -
80. crygmxl1 ENSDARG00000018797 7 1 - - - - - 1.000 - - - crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]
81. dpyda dpyda 12 1 - - - - - 1.000 - - -
82. akt3a ENSDARG00000104810 21 1 - - - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
83. BX957353.1 BX957353.1 10 1 - - - - - 1.000 - - -
84. BX537305.1 ENSDARG00000113834 10 1 - - - - - 1.000 - - -
85. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 1 - - - - - 1.000 - - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
86. iqsec3b ENSDARG00000093091 10 1 - - - - - 1.000 - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
87. C3AR1 18 1 - - - - - 1.000 - - - C3a anaphylatoxin chemotactic receptor
88. tcf23 ENSDARG00000087381 6 1 - - - - - 1.000 - - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
89. CABZ01023601.1 CABZ01023601.1 1 1 - - - - - 1.000 - - -
90. cyp2k22 ENSDARG00000040433 13 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily K, polypeptide 22 [Source:ZFIN;Acc:ZDB-GENE-040426-822]
91. C25H11orf74 C25H11orf74 161 1 - - - - - 1.000 - - -
92. ZNF337_23 ZNF337_23 39 1 - - - - - 1.000 - - -
93. inha ENSDARG00000052433, ENSDARG00000116262 6 1 - - - - - 1.000 - - - inhibin subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060503-554]
94. klc1a ENSDARG00000009796 10 1 - - - - - 1.000 - - - kinesin light chain 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1599]
95. zgc:103559 ENSDARG00000038293 1 1 - - - - - 1.000 - - - zgc:103559 [Source:ZFIN;Acc:ZDB-GENE-041212-22]
96. pard6ga ENSDARG00000031876 3 1 - - - - - 1.000 - - - par-6 family cell polarity regulator gamma a [Source:ZFIN;Acc:ZDB-GENE-050923-1]
97. crx ENSDARG00000011989, ENSDARG00000113850 330 1 - - - - - 1.000 - - - cone-rod homeobox [Source:ZFIN;Acc:ZDB-GENE-010403-1]
98. v2rh13 ENSDARG00000088192 0 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h13 [Source:ZFIN;Acc:ZDB-GENE-050419-264]
99. si:ch211-280c4.3 si:ch211-280c4.3 0 1 - - - - - 1.000 - - -
100. sftpbb ENSDARG00000067566 13 1 - - - - - 1.000 - - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]

There are 959 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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