Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for msh6

Gene Name Gene ID Reads Annotation
msh6 ENSDARG00000104541 197 mutS homolog 6 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-020905-3]










Genes with expression patterns similar to msh6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. msh6 ENSDARG00000104541 197 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mutS homolog 6 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-020905-3]
2. zgc:174862 ENSDARG00000077571 201 1.734 0.734 - - - - 1.000 - - - zgc:174862 [Source:ZFIN;Acc:ZDB-GENE-080303-29]
3. pappab ENSDARG00000059858 11 1.703 - - - - - 1.000 0.703 - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
4. zgc:92275 ENSDARG00000034048 9 1.703 - - - - - 1.000 0.703 - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
5. foxg1c ENSDARG00000068380, ENSDARG00000114414 25 1.605 0.774 - - - - - 0.831 - - forkhead box G1c [Source:ZFIN;Acc:ZDB-GENE-050419-26]
6. MYL4 ENSDARG00000011519 309 1.545 0.722 - - - - - 0.823 - - myosin, light chain 4, alkali; atrial, embryonic [Source:ZFIN;Acc:ZDB-GENE-050626-112]
7. ENSDARG00000090150 ENSDARG00000090150 966 1.534 - 0.807 - - - - 0.727 - -
8. RBPMS ENSDARG00000099396 61 1.509 0.740 - - - 0.769 - - - - RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
9. fam58a 423 1.5 0.762 0.738 - - - - - - - family with sequence similarity 58, member A, transcript variant X1
10. slc25a23b ENSDARG00000024708 51 1.488 - 0.702 - - - - 0.786 - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23b [Source:ZFIN;Acc:ZDB-GENE-040724-220]
11. si:dkey-30c15.9 si:dkey-30c15.9 4 1.477 0.774 - - - - - 0.703 - -
12. tmem59l ENSDARG00000003655 1536 1.463 0.703 0.760 - - - - - - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
13. KHDRBS3 ENSDARG00000101020 408 1.459 - - - - 0.733 - 0.726 - - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
14. si:ch211-51h9.7 ENSDARG00000074720 227 1.446 - - - - 0.745 0.701 - - - si:ch211-51h9.7 [Source:ZFIN;Acc:ZDB-GENE-081104-235]
15. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 1.437 0.734 - - - - - 0.703 - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
16. tceanc2 ENSDARG00000062919 32 1.437 0.734 - - - - - 0.703 - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
17. deptor ENSDARG00000040930 191 1.41 - 0.709 - - 0.701 - - - - DEP domain containing MTOR-interacting protein [Source:ZFIN;Acc:ZDB-GENE-061013-453]
18. C25H11orf74 C25H11orf74 161 1 - - - - - 1.000 - - -
19. crygm2d13 ENSDARG00000057460 1093 1 - - - - - 1.000 - - - crystallin, gamma M2d13 [Source:ZFIN;Acc:ZDB-GENE-040718-105]
20. PEG3_8 PEG3_8 1 1 - - - - - 1.000 - - -
21. si:dkey-39e8.5 si:dkey-39e8.5 2 1 - - - - - 1.000 - - -
22. si:ch73-119o17.1 si:ch73-119o17.1 6 1 - - - - - 1.000 - - -
23. CR387932.1 ENSDARG00000097344 2 1 - - - - - 1.000 - - -
24. gcgrb ENSDARG00000036272 54 1 - - - - - 1.000 - - - glucagon receptor b [Source:ZFIN;Acc:ZDB-GENE-050516-2]
25. si:dkeyp-67e1.6 ENSDARG00000073947, ENSDARG00000113513, ENSDARG00000113783 20 1 - - - - - 1.000 - - - si:dkeyp-67e1.6 [Source:ZFIN;Acc:ZDB-GENE-061207-87]
26. lctla ENSDARG00000036139, ENSDARG00000116316 32 1 - - - - - 1.000 - - - lactase-like a [Source:ZFIN;Acc:ZDB-GENE-040718-233]
27. CU633740.1 CU633740.1 8 1 - - - - - 1.000 - - -
28. rnf217 ENSDARG00000060944 10 1 - - - - - 1.000 - - - ring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
29. si:ch211-193e5.3 si:ch211-193e5.3 0 1 - - - - - 1.000 - - -
30. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1 - - - - - 1.000 - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
31. si:ch211-285c6.1 ENSDARG00000076257 2 1 - - - - - 1.000 - - - si:ch211-285c6.1 [Source:ZFIN;Acc:ZDB-GENE-041001-89]
32. FLVCR2 FLVCR2 5 1 - - - - - 1.000 - - -
33. BX537305.1 ENSDARG00000113834 10 1 - - - - - 1.000 - - -
34. valopb ENSDARG00000054181, ENSDARG00000110871 2 1 - - - - - 1.000 - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
35. aicda ENSDARG00000015734 3 1 - - - - - 1.000 - - - activation-induced cytidine deaminase [Source:ZFIN;Acc:ZDB-GENE-041122-2]
36. olfch1 ENSDARG00000100026 3 1 - - - - - 1.000 - - - olfactory receptor C family, h1 [Source:ZFIN;Acc:ZDB-GENE-060503-819]
37. si:ch211-137i24.12 ENSDARG00000094537 35 1 - - - - - 1.000 - - - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
38. si:ch211-207e19.15 ENSDARG00000113022 5 1 - - - - - 1.000 - - - si:ch211-207e19.15 [Source:ZFIN;Acc:ZDB-GENE-110914-27]
39. PCOLCE PCOLCE 25 1 - - - - - 1.000 - - -
40. CR749167.1 ENSDARG00000100165 38 1 - - - - - 1.000 - - -
41. si:ch211-278p9.2 ENSDARG00000095274 0 1 - - - - - 1.000 - - - si:ch211-278p9.2 [Source:ZFIN;Acc:ZDB-GENE-081028-37]
42. tmem174 ENSDARG00000035388 2 1 - - - - - 1.000 - - - transmembrane protein 174 [Source:ZFIN;Acc:ZDB-GENE-080819-2]
43. SQLE SQLE 1 1 - - - - - 1.000 - - -
44. BX248496.1 BX248496.1 0 1 - - - - - 1.000 - - -
45. BX322612.1 BX322612.1 236 1 - - - - - 1.000 - - -
46. ccr12.2 ccr12.2 2 1 - - - - - 1.000 - - -
47. CELA1_3 CELA1_3 0 1 - - - - - 1.000 - - -
48. PLXNB2_1 PLXNB2_1 10 1 - - - - - 1.000 - - -
49. kif13bb ENSDARG00000073859 7 1 - - - - - 1.000 - - - kinesin family member 13Bb [Source:ZFIN;Acc:ZDB-GENE-090908-5]
50. cel.2 ENSDARG00000029822 0 1 - - - - - 1.000 - - - carboxyl ester lipase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-061110-10]
51. mst1rb ENSDARG00000004871, ENSDARG00000116535 1 1 - - - - - 1.000 - - - macrophage stimulating 1 receptor b [Source:ZFIN;Acc:ZDB-GENE-071218-3]
52. igfbp6b ENSDARG00000090833 37 1 - - - - - 1.000 - - - insulin-like growth factor binding protein 6b [Source:ZFIN;Acc:ZDB-GENE-090521-2]
53. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1 - - - - - 1.000 - - - patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
54. ZNF337_23 ZNF337_23 39 1 - - - - - 1.000 - - -
55. asz1 ENSDARG00000004823, ENSDARG00000116151 8 1 - - - - - 1.000 - - - ankyrin repeat, SAM and basic leucine zipper domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-988]
56. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - - - 1.000 - - -
57. pdx1 ENSDARG00000002779, ENSDARG00000109275 28 1 - - - - - 1.000 - - - pancreatic and duodenal homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-122]
58. crx ENSDARG00000011989, ENSDARG00000113850 330 1 - - - - - 1.000 - - - cone-rod homeobox [Source:ZFIN;Acc:ZDB-GENE-010403-1]
59. GPR113 GPR113 0 1 - - - - - 1.000 - - -
60. CR354382.1 CR354382.1 42 1 - - - - - 1.000 - - -
61. inha ENSDARG00000052433, ENSDARG00000116262 6 1 - - - - - 1.000 - - - inhibin subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060503-554]
62. crygn2 ENSDARG00000030411 2551 1 - - - - - 1.000 - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
63. RAB37 RAB37 0 1 - - - - - 1.000 - - -
64. ZP2 ZP2 14 1 - - - - - 1.000 - - -
65. slc13a5 slc13a5 15 1 - - - - - 1.000 - - -
66. si:dkey-199f5.4 ENSDARG00000110483 4 1 - - - - - 1.000 - - - si:dkey-199f5.4 [Source:ZFIN;Acc:ZDB-GENE-100922-53]
67. CR735107.4 CR735107.4 0 1 - - - - - 1.000 - - -
68. ndr2 ENSDARG00000101279 2 1 - - - - - 1.000 - - - nodal-related 2 [Source:ZFIN;Acc:ZDB-GENE-990415-181]
69. diaph3 ENSDARG00000090785 16 1 - - - - - 1.000 - - - diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
70. cyp2k22 ENSDARG00000040433 13 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily K, polypeptide 22 [Source:ZFIN;Acc:ZDB-GENE-040426-822]
71. si:ch211-223a10.3 si:ch211-223a10.3 3 1 - - - - - 1.000 - - -
72. PAQR8 ENSDARG00000088828 26 1 - - - - - 1.000 - - - progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
73. si:dkeyp-35e5.9 ENSDARG00000103527 24 1 - - - - - 1.000 - - - si:dkeyp-35e5.9 [Source:ZFIN;Acc:ZDB-GENE-110913-107]
74. tyro3 ENSDARG00000005356 4 1 - - - - - 1.000 - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
75. camk1gb ENSDARG00000008788 189 1 - - - - - 1.000 - - - calcium/calmodulin-dependent protein kinase IGb [Source:ZFIN;Acc:ZDB-GENE-040426-1694]
76. LARP4 LARP4 48 1 - - - - - 1.000 - - -
77. stxbp4 ENSDARG00000076997 20 1 - - - - - 1.000 - - - syntaxin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-110420-5]
78. PEG3_17 PEG3_17 15 1 - - - - - 1.000 - - -
79. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 1 - - - - - 1.000 - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
80. si:ch211-197e7.1 ENSDARG00000095200 1 1 - - - - - 1.000 - - - si:ch211-197e7.1 [Source:ZFIN;Acc:ZDB-GENE-081103-26]
81. si:dkey-228g21.5 si:dkey-228g21.5 1 1 - - - - - 1.000 - - -
82. si:dkey-52l1.1 si:dkey-52l1.1 1 1 - - - - - 1.000 - - -
83. pla2g15 ENSDARG00000103271 4 1 - - - - - 1.000 - - - phospholipase A2, group XV [Source:ZFIN;Acc:ZDB-GENE-030131-6948]
84. EPB41L2 ENSDARG00000093374 7 1 - - - - - 1.000 - - - erythrocyte membrane protein band 4.1 like 2 [Source:HGNC Symbol;Acc:HGNC:3379]
85. btr06 ENSDARG00000054184 1 1 - - - - - 1.000 - - - bloodthirsty-related gene family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080516-2]
86. srd5a2a ENSDARG00000043587 21 1 - - - - - 1.000 - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
87. abl2 ENSDARG00000013841 145 1 - - - - - 1.000 - - - c-abl oncogene 2, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020809-2]
88. si:dkeyp-75d2.5 si:dkeyp-75d2.5 21 1 - - - - - 1.000 - - -
89. si:busm1-180g5.7 si:busm1-180g5.7 15 1 - - - - - 1.000 - - -
90. fubp3 ENSDARG00000086896 21 1 - - - - - 1.000 - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
91. gcdhl gcdhl 38 1 - - - - - 1.000 - - -
92. iqsec3b ENSDARG00000093091 10 1 - - - - - 1.000 - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
93. BX927237.2 BX927237.2 16 1 - - - - - 1.000 - - -
94. si:dkey-7i4.1 ENSDARG00000086897 2 1 - - - - - 1.000 - - - si:dkey-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-081028-64]
95. si:dkey-162h11.3 41 1 - - - - - 1.000 - - - si:dkey-162h11.3, transcript variant X2
96. crygm2a ENSDARG00000057536 1 1 - - - - - 1.000 - - - crystallin, gamma M2a [Source:ZFIN;Acc:ZDB-GENE-050516-9]
97. si:dkey-44g23.9 si:dkey-44g23.9 1 1 - - - - - 1.000 - - -
98. pcdh2g12 5 1 - - - - - 1.000 - - - protocadherin 2 gamma 12
99. si:ch211-233m11.1 ENSDARG00000074653 1 1 - - - - - 1.000 - - - si:ch211-233m11.1 [Source:ZFIN;Acc:ZDB-GENE-081028-16]
100. abch1 ENSDARG00000071341 1 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family H, member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-42]

There are 959 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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