Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for msgn1

Gene Name Gene ID Reads Annotation
msgn1 ENSDARG00000070546 188 mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]










Genes with expression patterns similar to msgn1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. msgn1 ENSDARG00000070546 188 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
2. si:dkey-85k15.4 ENSDARG00000095047 25 2.745 1.000 1.000 - - - - 0.745 - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
3. zgc:152968 ENSDARG00000037002 6 2.728 - 1.000 - - 0.983 - 0.745 - - zgc:152968 [Source:ZFIN;Acc:ZDB-GENE-061013-448]
4. KCNK17 ENSDARG00000105453 16 2.509 0.710 - - - - - 1.000 - 0.799 potassium channel, subfamily K, member 17 [Source:ZFIN;Acc:ZDB-GENE-120113-3]
5. supt3h ENSDARG00000098141 18 2 - 1.000 - - - - 1.000 - - SPT3 homolog, SAGA and STAGA complex component [Source:ZFIN;Acc:ZDB-GENE-040718-370]
6. BX321870.1 ENSDARG00000098519 9 2 - 1.000 - - - 1.000 - - -
7. bmp1b ENSDARG00000028053 25 2 - 1.000 - - - 1.000 - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
8. tmem168b ENSDARG00000062168 17 1.984 - - - - 0.984 1.000 - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
9. fbxw10 ENSDARG00000086484 11 1.983 1.000 - - - 0.983 - - - - F-box and WD repeat domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-101021-1]
10. SMARCA4 ENSDARG00000104339 48 1.942 0.942 1.000 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
11. si:ch211-197e7.8 si:ch211-197e7.8 4 1.914 1.000 - - - - - - - 0.914
12. BX649554.3_1 BX649554.3_1 1071 1.913 - - 0.997 - 0.916 - - - -
13. fn1 fn1 2538 1.894 - - 0.951 - 0.943 - - - -
14. ZNF337_16 ZNF337_16 22 1.865 0.865 1.000 - - - - - - -
15. fat3a ENSDARG00000033840 902 1.84 - 0.880 0.960 - - - - - - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
16. LYPLAL1 ENSDARG00000088764 87 1.84 - 0.865 - - 0.975 - - - - lysophospholipase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-32]
17. si:ch73-173m3.3 si:ch73-173m3.3 425 1.84 - 0.872 0.968 - - - - - -
18. ZC2HC1C ENSDARG00000070526 14 1.827 0.841 - - - 0.986 - - - - zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
19. pmvk ENSDARG00000070798, ENSDARG00000109348 76 1.82 0.820 - - - - 1.000 - - - phosphomevalonate kinase [Source:ZFIN;Acc:ZDB-GENE-070410-91]
20. DOCK4 DOCK4 78 1.82 - 1.000 - - 0.820 - - - -
21. phf21aa ENSDARG00000006878 31 1.816 - 1.000 - - 0.816 - - - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
22. dnaaf3 ENSDARG00000092662 20 1.791 - - - - 0.791 1.000 - - - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
23. PTGR2 ENSDARG00000070673 43 1.77 - 1.000 - - - 0.770 - - - prostaglandin reductase 2 [Source:ZFIN;Acc:ZDB-GENE-050506-71]
24. ccdc37 ccdc37 36 1.766 1.000 - - - 0.766 - - - -
25. map3k19 ENSDARG00000094272 59 1.752 0.880 - - - 0.872 - - - - mitogen-activated protein kinase kinase kinase 19 [Source:ZFIN;Acc:ZDB-GENE-081104-140]
26. prlrb ENSDARG00000045955 12 1.745 1.000 - - - - - 0.745 - - prolactin receptor b [Source:ZFIN;Acc:ZDB-GENE-070705-155]
27. syne3 ENSDARG00000023237 23 1.745 - - - - - 1.000 0.745 - - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
28. GMNC ENSDARG00000068719 28 1.745 - - - - - 1.000 0.745 - - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
29. swsap1 ENSDARG00000093423 14 1.745 - 1.000 - - - - 0.745 - - SWIM-type zinc finger 7 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-071116-2]
30. tmem178 ENSDARG00000020758 77 1.745 - 1.000 - - - - 0.745 - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
31. kcnh1a ENSDARG00000024167 9 1.745 - 1.000 - - - - 0.745 - - potassium voltage-gated channel, subfamily H (eag-related), member 1a [Source:ZFIN;Acc:ZDB-GENE-061226-1]
32. tpbgl ENSDARG00000114338 5 1.745 - - - - - 1.000 0.745 - - trophoblast glycoprotein-like [Source:ZFIN;Acc:ZDB-GENE-120209-2]
33. TRIM35_1 TRIM35_1 11 1.745 - - - - - 1.000 0.745 - -
34. si:dkeyp-51f12.2 ENSDARG00000095606 24 1.745 - 1.000 - - - - 0.745 - - si:dkeyp-51f12.2 [Source:ZFIN;Acc:ZDB-GENE-070705-546]
35. CABZ01088134.1 ENSDARG00000033587 4 1.745 - - - - - 1.000 0.745 - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
36. zgc:158432 ENSDARG00000067806, ENSDARG00000109239 4 1.745 - - - - - 1.000 0.745 - - zgc:158432 [Source:ZFIN;Acc:ZDB-GENE-061201-57]
37. CU652893.1 ENSDARG00000104131 3 1.745 - 1.000 - - - - 0.745 - -
38. nceh1a ENSDARG00000020427 35 1.745 - - - - - 1.000 0.745 - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
39. supt7l ENSDARG00000013461 41 1.744 - - - - 0.744 1.000 - - - SPT7-like STAGA complex gamma subunit [Source:ZFIN;Acc:ZDB-GENE-050227-17]
40. im:7141269 ENSDARG00000101756 30 1.742 - 1.000 - - - 0.742 - - - im:7141269 [Source:ZFIN;Acc:ZDB-GENE-041111-134]
41. si:dkey-202i12.5 si:dkey-202i12.5 20 1.725 - - - - 0.980 - 0.745 - -
42. rictora ENSDARG00000100867 20 1.721 - - - - 0.976 - 0.745 - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
43. gpr124 gpr124 25 1.719 1.000 - - - - 0.719 - - -
44. shox ENSDARG00000025891 338 1.702 1.000 - - - - - - - 0.702 short stature homeobox [Source:ZFIN;Acc:ZDB-GENE-051030-21]
45. wnt5b ENSDARG00000102464 1662 1.701 - - 0.985 - 0.716 - - - - wingless-type MMTV integration site family, member 5b [Source:ZFIN;Acc:ZDB-GENE-980526-87]
46. dyx1c1 dyx1c1 36 1.693 - - - - 0.820 0.873 - - -
47. EXD1 ENSDARG00000098669 27 1.69 - 0.941 - - 0.749 - - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
48. si:ch211-274p24.4 ENSDARG00000087088 36 1.685 - - - - 0.943 - 0.742 - - si:ch211-274p24.4 [Source:ZFIN;Acc:ZDB-GENE-091204-337]
49. fhl2b ENSDARG00000003991 32 1.683 0.802 - - - - 0.881 - - - four and a half LIM domains 2b [Source:ZFIN;Acc:ZDB-GENE-041010-121]
50. her1 ENSDARG00000014722 29 1.681 - - - - 0.936 - 0.745 - - hairy-related 1 [Source:ZFIN;Acc:ZDB-GENE-980526-125]
51. TULP1 TULP1 50 1.679 - - - - 0.934 - 0.745 - -
52. rsph4a ENSDARG00000067606 132 1.674 - - - - 0.932 0.742 - - - radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
53. got1l1 ENSDARG00000053644 49 1.666 0.953 - - - 0.713 - - - - glutamic-oxaloacetic transaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-556]
54. tdrd5 ENSDARG00000071450 25 1.656 0.911 - - - - - 0.745 - - tudor domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050208-502]
55. foxj1a ENSDARG00000101919 1095 1.648 - - 0.869 - - - 0.779 - - forkhead box J1a [Source:ZFIN;Acc:ZDB-GENE-060929-1178]
56. emx3 ENSDARG00000020417 85 1.624 - - - - 0.849 - - - 0.775 empty spiracles homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-53]
57. tcerg1a ENSDARG00000098822 204 1.622 0.812 - - - - - 0.810 - - transcription elongation regulator 1a (CA150) [Source:ZFIN;Acc:ZDB-GENE-030131-1791]
58. ropn1l ENSDARG00000058370, ENSDARG00000114122 57 1.617 - 0.723 - - 0.894 - - - - rhophilin associated tail protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040724-235]
59. eda ENSDARG00000074591, ENSDARG00000113529 263 1.609 0.850 - - - 0.759 - - - - ectodysplasin A [Source:ZFIN;Acc:ZDB-GENE-050107-6]
60. CU896555.1 CU896555.1 27 1.597 - - - 0.888 0.709 - - - -
61. SIRT4 ENSDARG00000010415 118 1.578 - - - - 0.833 - 0.745 - - sirtuin 4 [Source:ZFIN;Acc:ZDB-GENE-041010-65]
62. arsk ENSDARG00000059714, ENSDARG00000115105 31 1.566 - - - - 0.821 - 0.745 - - arylsulfatase family, member K [Source:ZFIN;Acc:ZDB-GENE-060929-332]
63. ptger4a ENSDARG00000059236 13 1.547 0.802 - - - - - 0.745 - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
64. TRPC4 TRPC4 18 1.544 - - - - - - 0.745 - 0.799
65. RNaseP_nuc_1 RNaseP_nuc_1 19 1.531 0.786 - - - - - 0.745 - -
66. CU694368.1 CU694368.1 56 1.527 - - - - - 0.787 0.740 - -
67. ing1 ENSDARG00000019116 394 1.513 - 0.785 - - 0.728 - - - - inhibitor of growth family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-4388]
68. grn1 ENSDARG00000089362 20 1.507 - - - - - 0.762 0.745 - - granulin 1 [Source:ZFIN;Acc:ZDB-GENE-060103-1]
69. bmpr1aa ENSDARG00000019728, ENSDARG00000115025 49 1.507 - - - - - 0.762 0.745 - - bone morphogenetic protein receptor, type IAa [Source:ZFIN;Acc:ZDB-GENE-000502-1]
70. ccdc147 ccdc147 39 1.503 0.758 - - - - - 0.745 - -
71. casc1 ENSDARG00000016815 99 1.499 - - - - 0.762 - 0.737 - - cancer susceptibility candidate 1 [Source:ZFIN;Acc:ZDB-GENE-041210-153]
72. ELFN2 ELFN2 7 1.487 - - - - - 0.742 0.745 - -
73. def8 ENSDARG00000068208 50 1.487 - - - - - 0.742 0.745 - - differentially expressed in FDCP 8 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041114-96]
74. zgc:171704 ENSDARG00000018048 14 1.479 - 0.734 - - - - 0.745 - - zgc:171704 [Source:ZFIN;Acc:ZDB-GENE-070820-16]
75. mfsd6l ENSDARG00000014761 60 1.46 - - - - 0.715 - 0.745 - - major facilitator superfamily domain containing 6-like [Source:ZFIN;Acc:ZDB-GENE-040801-105]
76. MYCT1 MYCT1 64 1.46 0.753 - - - - 0.707 - - -
77. si:dkey-225f23.4 ENSDARG00000102520 86 1.415 0.711 - - - - 0.704 - - - si:dkey-225f23.4 [Source:NCBI gene;Acc:100005326]
78. ZSWIM2 ENSDARG00000075700 8 1 1.000 - - - - - - - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
79. dclre1a ENSDARG00000091768 94 1 - 1.000 - - - - - - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
80. si:ch211-117i10.10 si:ch211-117i10.10 18 1 - - - - - 1.000 - - -
81. LMTK3 LMTK3 222 1 - 1.000 - - - - - - -
82. BX465203.1 ENSDARG00000113985 8 1 - - - - - 1.000 - - -
83. sytl4 ENSDARG00000102433 19 1 - 1.000 - - - - - - - synaptotagmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070209-217]
84. ATG7 ENSDARG00000102893 1 1 1.000 - - - - - - - - ATG7 autophagy related 7 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1633]
85. asb13a.2 ENSDARG00000045765, ENSDARG00000109879 8 1 1.000 - - - - - - - - ankyrin repeat and SOCS box containing 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041210-88]
86. figf 48 1 - 1.000 - - - - - - - c-fos induced growth factor, transcript variant X2
87. si:ch211-59h6.1 ENSDARG00000013022 193 1 - - - - - 1.000 - - - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
88. myl7 ENSDARG00000019096 1023 1 1.000 - - - - - - - - myosin, light chain 7, regulatory [Source:ZFIN;Acc:ZDB-GENE-991019-3]
89. RPGRIP1 ENSDARG00000076055 10 1 - 1.000 - - - - - - - RPGR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-394]
90. CU467888.1 CU467888.1 30 1 - 1.000 - - - - - - -
91. sycp2 ENSDARG00000088950 3 1 - 1.000 - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
92. TMPRSS7 5 1 1.000 - - - - - - - - transmembrane protease, serine 7
93. CABZ01085979.1 CABZ01085979.1 4 1 - 1.000 - - - - - - -
94. bsx ENSDARG00000068976, ENSDARG00000110782 139 1 1.000 - - - - - - - - brain-specific homeobox [Source:ZFIN;Acc:ZDB-GENE-040628-4]
95. otx5 ENSDARG00000043483 282 1 - - - - - 1.000 - - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
96. si:ch211-126g16.8 3 1 - - - - - 1.000 - - - si:ch211-126g16.8, transcript variant X1
97. si:ch211-152l15.4 si:ch211-152l15.4 13 1 - 1.000 - - - - - - -
98. CCDC66 2 1 - 1.000 - - - - - - - coiled-coil domain containing 66
99. si:ch211-220f16.1 ENSDARG00000093977 4 1 1.000 - - - - - - - - si:ch211-220f16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-198]
100. MEX3D MEX3D 293 1 - - - - - 1.000 - - -

There are 1680 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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