Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mrto4

Gene Name Gene ID Reads Annotation
mrto4 ENSDARG00000007130 1086 MRT4 homolog, ribosome maturation factor [Source:ZFIN;Acc:ZDB-GENE-050417-142]










Genes with expression patterns similar to mrto4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mrto4 ENSDARG00000007130 1086 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 MRT4 homolog, ribosome maturation factor [Source:ZFIN;Acc:ZDB-GENE-050417-142]
2. grsf1 ENSDARG00000053021 2752 1.696 - 0.847 - - - 0.849 - - - G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
3. plecb ENSDARG00000021987 13621 1.626 0.834 0.792 - - - - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
4. arpp21 ENSDARG00000061081 892 1.603 0.842 0.761 - - - - - - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
5. cd248b ENSDARG00000077938 2561 1.593 - 0.823 - - - 0.770 - - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
6. ccdc58 ENSDARG00000045351 972 1.589 - 0.823 - - - 0.766 - - - coiled-coil domain containing 58 [Source:ZFIN;Acc:ZDB-GENE-040426-1780]
7. C13H10orf71 3489 1.58 0.822 0.758 - - - - - - - chromosome 13 C10orf71 homolog
8. sptb ENSDARG00000030490 7128 1.579 0.833 0.746 - - - - - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
9. fbxl22 ENSDARG00000096995 1290 1.574 0.771 0.803 - - - - - - - F-box and leucine-rich repeat protein 22 [Source:ZFIN;Acc:ZDB-GENE-050227-1]
10. hfe2 4113 1.562 0.739 0.823 - - - - - - - hemochromatosis type 2
11. mrpl43 ENSDARG00000076334 4045 1.542 0.726 - - - - 0.816 - - - mitochondrial ribosomal protein L43 [Source:ZFIN;Acc:ZDB-GENE-040718-125]
12. si:ch211-197l9.2 ENSDARG00000078244 655 1.538 0.714 0.824 - - - - - - - si:ch211-197l9.2 [Source:ZFIN;Acc:ZDB-GENE-091204-369]
13. PHB2 PHB2 3755 1.537 0.803 0.734 - - - - - - -
14. chrnd ENSDARG00000019342 2728 1.535 0.777 0.758 - - - - - - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
15. txlnbb ENSDARG00000076241 6396 1.524 0.809 0.715 - - - - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
16. ntmt1 ENSDARG00000022399 5779 1.522 0.737 0.785 - - - - - - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
17. smyd1b ENSDARG00000091253 4964 1.521 0.791 0.730 - - - - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
18. FHOD3_1 FHOD3_1 983 1.52 0.750 0.770 - - - - - - -
19. cacng1 cacng1 3118 1.503 0.729 0.774 - - - - - - -
20. hapln1a ENSDARG00000089769 12334 1.501 0.747 0.754 - - - - - - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
21. ube2nb ENSDARG00000045877 4583 1.5 - 0.795 - 0.705 - - - - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
22. dchs1b ENSDARG00000079850 831 1.495 0.757 0.738 - - - - - - - dachsous cadherin-related 1b [Source:ZFIN;Acc:ZDB-GENE-050208-41]
23. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.493 0.789 0.704 - - - - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
24. kcnma1a ENSDARG00000079840 2584 1.489 0.740 0.749 - - - - - - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
25. cth ENSDARG00000074301 3860 1.488 0.732 0.756 - - - - - - - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
26. alg3 ENSDARG00000053155 1843 1.485 - 0.761 - - - 0.724 - - - asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-050522-334]
27. rnf139 ENSDARG00000036929 494 1.481 - 0.731 - - - 0.750 - - - ring finger protein 139 [Source:ZFIN;Acc:ZDB-GENE-080401-4]
28. pcyt1aa ENSDARG00000011233 1985 1.48 - - - - - 0.726 0.754 - - phosphate cytidylyltransferase 1, choline, alpha a [Source:ZFIN;Acc:ZDB-GENE-050417-108]
29. tcea3 ENSDARG00000004724 674 1.477 0.751 0.726 - - - - - - - transcription elongation factor A (SII), 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1860]
30. vcl vcl 6667 1.468 0.758 0.710 - - - - - - -
31. sgcg_1 ENSDARG00000038107 1998 1.465 0.747 - - - - 0.718 - - - sarcoglycan, gamma [Source:ZFIN;Acc:ZDB-GENE-030724-2]
32. BX248510.1 ENSDARG00000075422 1449 1.458 0.741 - - - - 0.717 - - - mitochondrial ribosomal protein L49 [Source:NCBI gene;Acc:558658]
33. lrpprc ENSDARG00000043970 3847 1.457 - 0.726 - - - 0.731 - - - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
34. pygma ENSDARG00000055518 15972 1.454 0.726 0.728 - - - - - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
35. PHTF2 ENSDARG00000102123, ENSDARG00000114503 898 1.453 - 0.708 - - - 0.745 - - - putative homeodomain transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-040711-4]
36. hhatla ENSDARG00000039051 6598 1.446 0.745 0.701 - - - - - - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
37. WU:FC32F04 WU:FC32F04 2525 1.443 0.740 0.703 - - - - - - -
38. ITGB1BP2 ENSDARG00000030176 2472 1.436 0.721 0.715 - - - - - - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
39. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 1.435 0.732 0.703 - - - - - - - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
40. six2b ENSDARG00000054878 567 1.428 0.700 0.728 - - - - - - - SIX homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080723-23]
41. bag3 ENSDARG00000039486 1087 1.424 0.713 0.711 - - - - - - - BCL2 associated athanogene 3 [Source:ZFIN;Acc:ZDB-GENE-040801-40]
42. CU638714.1 ENSDARG00000100303 2132 1.417 - 0.705 - - - 0.712 - - -
43. hibadhb ENSDARG00000007959 4858 1.415 - - - - - 0.704 0.711 - - 3-hydroxyisobutyrate dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-1582]
44. alpk3a ENSDARG00000078989 1992 1.408 0.706 0.702 - - - - - - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
45. rbmx ENSDARG00000014244 3445 0.885 - 0.885 - - - - - - - RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
46. mrps9 ENSDARG00000061505 1636 0.884 - - - - - 0.884 - - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
47. znf106a ENSDARG00000016651 6049 0.876 - 0.876 - - - - - - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
48. C12H10orf71 C12H10orf71 595 0.867 0.867 - - - - - - - -
49. enpp1 ENSDARG00000005789 3267 0.861 0.861 - - - - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-172]
50. si:ch73-30n17.4 si:ch73-30n17.4 650 0.856 - - - - - 0.856 - - -
51. mtdhb ENSDARG00000004939 1225 0.856 - 0.856 - - - - - - - metadherin b [Source:ZFIN;Acc:ZDB-GENE-090929-2]
52. prx ENSDARG00000017246 6183 0.855 0.855 - - - - - - - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
53. fam192a ENSDARG00000041631 4113 0.854 - - - - - - 0.854 - - family with sequence similarity 192, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6692]
54. ehd1b ENSDARG00000014793, ENSDARG00000110243, ENSDARG00000110919 2496 0.853 - 0.853 - - - - - - - EH-domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2069]
55. aass ENSDARG00000051816 3795 0.852 - 0.852 - - - - - - - aminoadipate-semialdehyde synthase [Source:ZFIN;Acc:ZDB-GENE-061220-8]
56. gpd1l ENSDARG00000040024 2182 0.849 - 0.849 - - - - - - - glycerol-3-phosphate dehydrogenase 1 like [Source:ZFIN;Acc:ZDB-GENE-041010-220]
57. cd2bp2 ENSDARG00000027357, ENSDARG00000115040, ENSDARG00000115297 1808 0.844 - 0.844 - - - - - - - CD2 (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-925]
58. CR392006.1 CR392006.1 1401 0.843 0.843 - - - - - - - -
59. pno1 ENSDARG00000008502 4547 0.842 - 0.842 - - - - - - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
60. drap1 ENSDARG00000041203 6749 0.842 - 0.842 - - - - - - - DR1-associated protein 1 (negative cofactor 2 alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-400]
61. qars ENSDARG00000010316 2715 0.841 - 0.841 - - - - - - - glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
62. lpl ENSDARG00000087697 2578 0.84 - 0.840 - - - - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
63. AL929007.1 AL929007.1 3649 0.839 - 0.839 - - - - - - -
64. eef2l2 ENSDARG00000035256 6815 0.837 0.837 - - - - - - - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
65. jam2a ENSDARG00000058996 701 0.837 - 0.837 - - - - - - - junctional adhesion molecule 2a [Source:ZFIN;Acc:ZDB-GENE-031204-3]
66. ppp6r3 ENSDARG00000013379 2912 0.833 - 0.833 - - - - - - - protein phosphatase 6, regulatory subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3251]
67. si:dkey-181m9.5 si:dkey-181m9.5 1079 0.832 0.832 - - - - - - - -
68. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 0.832 0.832 - - - - - - - - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
69. zgc:153662 zgc:153662 4604 0.832 0.832 - - - - - - - -
70. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 0.831 - 0.831 - - - - - - - structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
71. CCRN4L CCRN4L 518 0.829 0.829 - - - - - - - -
72. smtnl ENSDARG00000055632, ENSDARG00000109489 788 0.828 - 0.828 - - - - - - - smoothelin, like [Source:ZFIN;Acc:ZDB-GENE-040212-1]
73. timm8b ENSDARG00000055708 7291 0.827 - 0.827 - - - - - - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
74. smpx ENSDARG00000045302 2175 0.826 0.826 - - - - - - - - small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
75. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 0.825 0.825 - - - - - - - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
76. celf1 ENSDARG00000005315 5598 0.824 - 0.824 - - - - - - - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
77. TXNDC16 ENSDARG00000032256 231 0.824 - - - - - 0.824 - - - thioredoxin domain containing 16 [Source:ZFIN;Acc:ZDB-GENE-100712-1]
78. CABZ01045618.2 CABZ01045618.2 1663 0.824 - 0.824 - - - - - - -
79. rnd3a ENSDARG00000076799 4705 0.824 - 0.824 - - - - - - - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
80. dmd ENSDARG00000008487, ENSDARG00000115779 536 0.823 0.823 - - - - - - - - dystrophin [Source:ZFIN;Acc:ZDB-GENE-010426-1]
81. tmem41ab ENSDARG00000026771, ENSDARG00000114061, ENSDARG00000116237 641 0.819 0.819 - - - - - - - - transmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
82. cdkal1 ENSDARG00000104848 2102 0.819 - 0.819 - - - - - - - CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
83. cacna1sa ENSDARG00000029457 883 0.819 0.819 - - - - - - - - calcium channel, voltage-dependent, L type, alpha 1S subunit, a [Source:ZFIN;Acc:ZDB-GENE-090514-1]
84. mc1r ENSDARG00000020237 108 0.818 - - - - - 0.818 - - - melanocortin 1 receptor [Source:ZFIN;Acc:ZDB-GENE-030502-1]
85. slc25a5 ENSDARG00000092553 626 0.818 - - - - - - 0.818 - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:ZFIN;Acc:ZDB-GENE-020419-9]
86. elmo1 ENSDARG00000098753 6966 0.816 - 0.816 - - - - - - - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
87. rpf2 ENSDARG00000043960 2719 0.816 - 0.816 - - - - - - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
88. SH3GLB1 SH3GLB1 2274 0.815 - 0.815 - - - - - - -
89. TULP1_1 TULP1_1 260 0.815 0.815 - - - - - - - -
90. ndufab1b ENSDARG00000014915 12796 0.814 - 0.814 - - - - - - - NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
91. gtpbp1 ENSDARG00000053467 1786 0.813 - 0.813 - - - - - - - GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030909-12]
92. ssb ENSDARG00000029252 3394 0.813 - 0.813 - - - - - - - Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]
93. metap1 ENSDARG00000033440, ENSDARG00000110334 6569 0.813 - 0.813 - - - - - - - methionyl aminopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-050626-124]
94. mrpl17 ENSDARG00000075677 1840 0.812 0.812 - - - - - - - - mitochondrial ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-040912-133]
95. mpp6b ENSDARG00000029761 2142 0.812 - 0.812 - - - - - - - membrane protein, palmitoylated 6b (MAGUK p55 subfamily member 6) [Source:ZFIN;Acc:ZDB-GENE-040426-775]
96. mrps2 ENSDARG00000103198 2410 0.811 - 0.811 - - - - - - - mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
97. hmcn2 ENSDARG00000079327, ENSDARG00000086060 1075 0.81 - 0.810 - - - - - - - hemicentin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9765]
98. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 0.809 - 0.809 - - - - - - - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
99. dctn4 ENSDARG00000023988 860 0.809 - - - - - 0.809 - - - dynactin 4 [Source:ZFIN;Acc:ZDB-GENE-050417-306]
100. klhl41b ENSDARG00000006757 10762 0.809 0.809 - - - - - - - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]

There are 630 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA