Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mrps6

Gene Name Gene ID Reads Annotation
mrps6 ENSDARG00000039543 1892 mitochondrial ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-060825-59]










Genes with expression patterns similar to mrps6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mrps6 ENSDARG00000039543 1892 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-060825-59]
2. acsl1 acsl1 4216 2.579 0.769 0.995 - - - - 0.815 - -
3. sox6 ENSDARG00000015536 7728 2.462 0.790 0.949 - - - - 0.723 - - SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
4. ppapdc3 ppapdc3 4924 2.461 0.741 0.989 - - - - 0.731 - -
5. mrpl54 ENSDARG00000071468 2715 2.326 0.749 - - - - 0.784 0.793 - - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
6. ATP5J_2 ATP5J_2 2381 2.268 0.782 - - - - 0.739 0.747 - -
7. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 1.834 - 0.995 - - - - 0.839 - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
8. phb ENSDARG00000057414 9551 1.82 - 0.975 - - - - 0.845 - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
9. CABZ01076275.1 ENSDARG00000100753 5137 1.799 - 0.993 - - - - 0.806 - - scavenger receptor class B, member 2b [Source:NCBI gene;Acc:564077]
10. nxf1 ENSDARG00000055076 3251 1.787 - 0.991 - - - - 0.796 - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
11. cox6a1 ENSDARG00000022438 18811 1.761 - 0.991 - - - - 0.770 - - cytochrome c oxidase subunit 6A1 [Source:ZFIN;Acc:ZDB-GENE-030131-7715]
12. txndc12 ENSDARG00000038980 795 1.73 - 0.996 - - - - 0.734 - - thioredoxin domain containing 12 (endoplasmic reticulum) [Source:ZFIN;Acc:ZDB-GENE-050522-497]
13. ndufb5 ENSDARG00000070824, ENSDARG00000116923 9287 1.727 - 0.989 - - - - 0.738 - - NADH:ubiquinone oxidoreductase subunit B5 [Source:ZFIN;Acc:ZDB-GENE-011010-1]
14. asb12a ENSDARG00000017086, ENSDARG00000110715 4230 1.717 - 0.991 - - - 0.726 - - - ankyrin repeat and SOCS box-containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-1647]
15. msi2b ENSDARG00000032614 3095 1.716 0.717 0.999 - - - - - - - musashi RNA-binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1268]
16. urm1 ENSDARG00000091198, ENSDARG00000111234 1213 1.708 - 0.997 - - - 0.711 - - - ubiquitin related modifier 1 [Source:ZFIN;Acc:ZDB-GENE-091204-300]
17. eif3g ENSDARG00000016889 10367 1.706 - 0.970 - - - - 0.736 - - eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
18. pvalb4 ENSDARG00000024433 35736 1.701 - 0.985 - - - - 0.716 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
19. tnfrsf9a ENSDARG00000060498, ENSDARG00000116466 679 1.699 0.701 0.998 - - - - - - - tumor necrosis factor receptor superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060421-8213]
20. C1QBP ENSDARG00000039887 11186 1.665 0.763 - - - - - 0.902 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
21. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.662 0.735 0.927 - - - - - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
22. snrpd3l ENSDARG00000076283 7655 1.653 - 0.923 - - - - 0.730 - - small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
23. hibadhb ENSDARG00000007959 4858 1.641 - - - - - 0.779 0.862 - - 3-hydroxyisobutyrate dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-1582]
24. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 1.627 0.760 - - - - - 0.867 - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
25. cpeb3 ENSDARG00000060103 2367 1.618 - - - - - 0.800 0.818 - - cytoplasmic polyadenylation element binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-090312-68]
26. dnajc15 ENSDARG00000038309 1274 1.608 0.839 - - - - - 0.769 - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
27. ppp2cb ENSDARG00000099241, ENSDARG00000111489 25466 1.595 - 0.890 - - - - 0.705 - - protein phosphatase 2, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-040426-2487]
28. prickle1a ENSDARG00000040649 700 1.586 - - - - - - 0.770 0.816 - prickle homolog 1a [Source:ZFIN;Acc:ZDB-GENE-030724-5]
29. arpp21 ENSDARG00000061081 892 1.583 - - - - - - 0.788 0.795 - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
30. COQ7 ENSDARG00000062594 989 1.583 - - - - - - 0.736 0.847 - coenzyme Q7 homolog, ubiquinone (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-262]
31. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.581 0.767 - - - - - 0.814 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
32. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.562 0.710 - - - - - 0.852 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
33. sgcd ENSDARG00000098573 4980 1.557 0.797 - - - - - 0.760 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
34. TMEM185A TMEM185A 5505 1.555 - - - - - 0.733 0.822 - -
35. alpk3a ENSDARG00000078989 1992 1.554 0.799 - - - - - 0.755 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
36. mrpl38 ENSDARG00000039667 1145 1.549 - - - - - 0.734 0.815 - - mitochondrial ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-040426-2373]
37. efemp2a ENSDARG00000094324 39261 1.546 0.728 - - - - - 0.818 - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
38. cetn4 ENSDARG00000041215 898 1.544 - - - - - 0.725 - 0.819 - centrin 4 [Source:ZFIN;Acc:ZDB-GENE-030826-21]
39. fundc2 ENSDARG00000103740 3856 1.539 - - - - - 0.762 - 0.777 - fun14 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041010-26]
40. pygmb ENSDARG00000013317 5454 1.538 - - - - - - 0.762 0.776 - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
41. mir133b_1 671 1.538 0.721 - - - - - - 0.817 - microRNA 133b
42. zgc:193541 ENSDARG00000092873 21276 1.532 - - - - - 0.743 0.789 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
43. flncb ENSDARG00000018820 5595 1.532 0.767 - - - - - 0.765 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
44. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.526 0.762 - - - - - 0.764 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
45. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 1.521 0.721 - - - - - 0.800 - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
46. arvcfb ENSDARG00000061688 2388 1.513 0.732 - - - - - 0.781 - - ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
47. acaca ENSDARG00000078512, ENSDARG00000114071 386 1.513 - - - - - 0.705 - 0.808 - acetyl-CoA carboxylase alpha [Source:ZFIN;Acc:ZDB-GENE-060526-74]
48. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 1.512 - - - - - 0.762 0.750 - - NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
49. klhl21 ENSDARG00000039255 2550 1.507 0.798 - - - - - 0.709 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
50. tcp11l2 ENSDARG00000027316 1906 1.507 - - - - - - 0.756 0.751 - t-complex 11, testis-specific-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1956]
51. SCARF2 1117 1.504 0.783 - - - - - 0.721 - - scavenger receptor class F, member 2
52. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.503 0.791 - - - - - 0.712 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
53. cul2 ENSDARG00000013965 1407 1.503 0.780 - - - - - 0.723 - - cullin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8032]
54. col4a1 ENSDARG00000055009 3083 1.501 - - - - - 0.761 0.740 - - collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
55. sod2 ENSDARG00000042644 1382 1.501 - - - - - 0.728 0.773 - - superoxide dismutase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7742]
56. ndufs5 ENSDARG00000006290 15918 1.498 0.720 0.778 - - - - - - - NADH:ubiquinone oxidoreductase subunit S5 [Source:ZFIN;Acc:ZDB-GENE-050522-437]
57. fam212aa 1132 1.495 - - - - - - 0.762 0.733 - family with sequence similarity 212, member Aa, transcript variant X1
58. sypl2b ENSDARG00000000690 2006 1.495 - - - - - 0.710 0.785 - - synaptophysin-like 2b [Source:ZFIN;Acc:ZDB-GENE-050417-309]
59. mrps9 ENSDARG00000061505 1636 1.494 - - - - - 0.722 0.772 - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
60. si:ch1073-184j22.2 ENSDARG00000078598 707 1.494 - - - - - - 0.734 0.760 - si:ch1073-184j22.2 [Source:ZFIN;Acc:ZDB-GENE-081104-32]
61. tnnt2d ENSDARG00000002988 7590 1.493 0.788 - - - - - 0.705 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
62. lamb2 ENSDARG00000002084 3265 1.49 0.761 - - 0.729 - - - - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
63. zgc:92518 ENSDARG00000016343 3837 1.49 0.754 - - - - - 0.736 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
64. kcnma1a ENSDARG00000079840 2584 1.489 0.759 - - - - - 0.730 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
65. celf1 ENSDARG00000005315 5598 1.489 0.718 - - - - - 0.771 - - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
66. COQ5 ENSDARG00000035618 556 1.486 0.774 - - - - - 0.712 - - coenzyme Q5, methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040912-5]
67. GSTK1_1 GSTK1_1 316 1.486 - - - - - 0.700 0.786 - -
68. TMPO TMPO 3264 1.484 0.749 - - - - - 0.735 - -
69. enpp1 ENSDARG00000005789 3267 1.483 0.709 - - - - - 0.774 - - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-172]
70. kdm6bb ENSDARG00000056929 4807 1.482 - - - - - 0.746 0.736 - - lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
71. C8H5orf51 C8H5orf51 1199 1.48 - - - - - 0.706 - 0.774 -
72. rps19 ENSDARG00000030602 77975 1.478 - 0.743 - - - - 0.735 - - ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
73. actr6 ENSDARG00000021370 650 1.478 - - - - - 0.728 0.750 - - ARP6 actin related protein 6 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3543]
74. hs6st1b ENSDARG00000071501, ENSDARG00000116688 843 1.475 0.711 - - - - - 0.764 - - heparan sulfate 6-O-sulfotransferase 1b [Source:ZFIN;Acc:ZDB-GENE-070103-2]
75. hspg2 ENSDARG00000076564 3440 1.475 - - - - - - 0.728 0.747 - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
76. sh3bgr ENSDARG00000021633 3498 1.47 - - - - - - 0.719 0.751 - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
77. cd248b ENSDARG00000077938 2561 1.466 - - - - - 0.747 0.719 - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
78. txlnbb ENSDARG00000076241 6396 1.464 0.730 - - - - - 0.734 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
79. tns1 tns1 5891 1.463 0.704 - - - - - 0.759 - -
80. hapln1a ENSDARG00000089769 12334 1.463 0.750 - - - - - 0.713 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
81. nfybb ENSDARG00000045611, ENSDARG00000110926 350 1.456 - - - - - 0.741 - 0.715 - nuclear transcription factor Y, beta b [Source:ZFIN;Acc:ZDB-GENE-050306-25]
82. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 1.454 0.724 - - - - - 0.730 - - mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
83. fam84a ENSDARG00000018921 375 1.453 0.702 - - - - 0.751 - - - family with sequence similarity 84, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1247]
84. PTP4A3 ENSDARG00000039997 3814 1.45 0.745 - - - - - 0.705 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
85. myod1 ENSDARG00000030110 6019 1.447 0.714 - - - - - 0.733 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
86. COMP 2018 1.445 0.725 - - - - - 0.720 - - cartilage oligomeric matrix protein, transcript variant X1
87. zeb1b ENSDARG00000013207, ENSDARG00000113922 2571 1.44 0.704 - - - - - 0.736 - - zinc finger E-box binding homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010621-1]
88. cyc1 ENSDARG00000038075 16699 1.439 - - - - - 0.724 0.715 - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
89. pelo ENSDARG00000055477 1927 1.426 - - - 0.717 - - 0.709 - - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
90. nop16 ENSDARG00000044402 3645 1.423 0.714 - - - - - 0.709 - - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
91. vbp1 ENSDARG00000030241 10619 1.419 0.714 - - - - 0.705 - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
92. hspa4a ENSDARG00000004754 3439 1.416 0.701 - - - - - 0.715 - - heat shock protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2832]
93. hibadha ENSDARG00000102906 778 1.413 - - - - - - 0.709 0.704 - 3-hydroxyisobutyrate dehydrogenase a [Source:ZFIN;Acc:ZDB-GENE-040801-264]
94. IL17RD ENSDARG00000098359 2309 0.999 - 0.999 - - - - - - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
95. aurka ENSDARG00000012485 3304 0.999 - 0.999 - - - - - - - aurora kinase A [Source:ZFIN;Acc:ZDB-GENE-040801-161]
96. tusc2b ENSDARG00000025340 2391 0.999 - 0.999 - - - - - - - tumor suppressor 2, mitochondrial calcium regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-99]
97. mir205 2147 0.998 - 0.998 - - - - - - - microRNA 205
98. oraov1 497 0.997 - 0.997 - - - - - - - oral cancer overexpressed 1
99. elnb ENSDARG00000069017 744 0.997 - 0.997 - - - - - - - elastin b [Source:ZFIN;Acc:ZDB-GENE-061212-2]
100. pus10 ENSDARG00000079973 637 0.997 - 0.997 - - - - - - - pseudouridylate synthase 10 [Source:ZFIN;Acc:ZDB-GENE-080204-5]

There are 1219 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA