Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mrps5

Gene Name Gene ID Reads Annotation
mrps5 ENSDARG00000062209, ENSDARG00000114003 619 mitochondrial ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-060929-264]










Genes with expression patterns similar to mrps5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mrps5 ENSDARG00000062209, ENSDARG00000114003 619 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-060929-264]
2. gramd1a ENSDARG00000076689 1148 1.615 - 0.795 - - - 0.820 - - - GRAM domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-060503-688]
3. pdrg1 ENSDARG00000045017 628 1.61 - - - - - - 0.770 0.840 - p53 and DNA-damage regulated 1 [Source:ZFIN;Acc:ZDB-GENE-050417-276]
4. SACM1L_1 SACM1L_1 750 1.595 - - - - - 0.761 0.834 - -
5. STARD4 ENSDARG00000102477 411 1.557 - - - - - - 0.761 0.796 - StAR-related lipid transfer (START) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-168]
6. CABZ01081148.1 CABZ01081148.1 789 1.554 - 0.761 - - - - 0.793 - -
7. sod1 ENSDARG00000043848 1514 1.547 - 0.742 - - - - 0.805 - - superoxide dismutase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-990415-258]
8. sdf2 ENSDARG00000024026 805 1.545 - - - - - 0.783 - 0.762 - stromal cell-derived factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8823]
9. nudcd1 ENSDARG00000036158 608 1.525 - - - - - - 0.709 0.816 - NudC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-483]
10. clec16a ENSDARG00000038094 501 1.514 - 0.741 - - - - 0.773 - - C-type lectin domain containing 16A [Source:ZFIN;Acc:ZDB-GENE-040426-951]
11. FAM195A FAM195A 1134 1.51 - - - 0.734 - 0.776 - - -
12. tspan5a ENSDARG00000086033 1865 1.504 0.705 0.799 - - - - - - - tetraspanin 5a [Source:ZFIN;Acc:ZDB-GENE-041010-145]
13. fas ENSDARG00000043586 194 1.501 - - - - - 0.720 - 0.781 - Fas cell surface death receptor [Source:ZFIN;Acc:ZDB-GENE-061019-2]
14. CABZ01068246.1 ENSDARG00000114719 353 1.485 - 0.785 - - - 0.700 - - -
15. pcdh1b ENSDARG00000036175 101 1.467 - 0.711 - - - - - 0.756 - protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2]
16. fdx1l 461 1.459 - - - - - 0.731 - 0.728 - ferredoxin 1-like
17. ccbl1 702 1.449 - 0.710 - - - 0.739 - - - cysteine conjugate-beta lyase, cytoplasmic, transcript variant X1
18. zgc:112964 ENSDARG00000101200 4751 1.447 - 0.712 - - - - - 0.735 - zgc:112964 [Source:ZFIN;Acc:ZDB-GENE-050306-47]
19. sfmbt2 ENSDARG00000045519 251 1.43 - 0.721 - - - - - 0.709 - Scm like with four mbt domains 2 [Source:ZFIN;Acc:ZDB-GENE-041210-196]
20. cirh1a 767 1.419 0.716 - - - - - 0.703 - - cirrhosis, autosomal recessive 1A (cirhin), transcript variant X1
21. zgc:193742 ENSDARG00000092387, ENSDARG00000115140, ENSDARG00000116906 653 0.899 - 0.899 - - - - - - - zgc:193742 [Source:ZFIN;Acc:ZDB-GENE-081022-37]
22. zgc:56585 ENSDARG00000026236 704 0.893 - 0.893 - - - - - - - zgc:56585 [Source:ZFIN;Acc:ZDB-GENE-040426-1084]
23. NCBP1 585 0.888 - 0.888 - - - - - - - nuclear cap binding protein subunit 1
24. mapk6 ENSDARG00000032103 6422 0.888 - 0.888 - - - - - - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
25. mark2a ENSDARG00000079905 1765 0.883 - 0.883 - - - - - - - MAP/microtubule affinity-regulating kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4145]
26. si:dkey-61l1.4 ENSDARG00000092567 1012 0.883 - 0.883 - - - - - - - si:dkey-61l1.4 [Source:ZFIN;Acc:ZDB-GENE-070705-483]
27. pura pura 1854 0.876 - 0.876 - - - - - - -
28. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 0.868 - 0.868 - - - - - - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
29. SLC29A3 ENSDARG00000077828 382 0.866 - - - - - 0.866 - - - solute carrier family 29 (equilibrative nucleoside transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-081107-66]
30. srfbp1 ENSDARG00000075323 2262 0.864 - 0.864 - - - - - - - serum response factor binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1991]
31. rhot1a ENSDARG00000099996 2059 0.861 - - - - - - 0.861 - - ras homolog family member T1a [Source:ZFIN;Acc:ZDB-GENE-030131-5354]
32. ATP13A3 ENSDARG00000076622 1000 0.86 - 0.860 - - - - - - - ATPase 13A3 [Source:ZFIN;Acc:ZDB-GENE-120521-1]
33. PPP1R8 PPP1R8 1897 0.86 - 0.860 - - - - - - -
34. sema3c ENSDARG00000034300 881 0.858 - - - - - - - 0.858 - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:ZFIN;Acc:ZDB-GENE-050513-5]
35. u2af2a ENSDARG00000012505 2920 0.857 - 0.857 - - - - - - - U2 small nuclear RNA auxiliary factor 2a [Source:ZFIN;Acc:ZDB-GENE-050706-131]
36. epha4a ENSDARG00000054454 1501 0.855 - 0.855 - - - - - - - eph receptor A4a [Source:ZFIN;Acc:ZDB-GENE-001207-7]
37. usp10 ENSDARG00000103422 4247 0.854 - 0.854 - - - - - - - ubiquitin specific peptidase 10 [Source:ZFIN;Acc:ZDB-GENE-030219-132]
38. zgc:92664 ENSDARG00000015161 1651 0.853 - 0.853 - - - - - - - zgc:92664 [Source:ZFIN;Acc:ZDB-GENE-040718-119]
39. zgc:66427 ENSDARG00000023303, ENSDARG00000114732 1239 0.853 - - - - - - 0.853 - - zgc:66427 [Source:ZFIN;Acc:ZDB-GENE-040426-1913]
40. dcps ENSDARG00000009862 571 0.847 - 0.847 - - - - - - - decapping enzyme, scavenger [Source:ZFIN;Acc:ZDB-GENE-040311-1]
41. reep3l reep3l 608 0.846 - 0.846 - - - - - - -
42. ms4a17a.11 ENSDARG00000094809 1086 0.842 - - - - - 0.842 - - - membrane-spanning 4-domains, subfamily A, member 17A.11 [Source:ZFIN;Acc:ZDB-GENE-050417-157]
43. tnpo2 ENSDARG00000038239 2469 0.842 - 0.842 - - - - - - - transportin 2 (importin 3, karyopherin beta 2b) [Source:ZFIN;Acc:ZDB-GENE-040822-16]
44. luc7l ENSDARG00000055903 3357 0.842 - 0.842 - - - - - - - LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
45. RBM7 ENSDARG00000020841 1203 0.841 - 0.841 - - - - - - - RNA binding motif protein 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6724]
46. mfap1 ENSDARG00000018241 833 0.836 - 0.836 - - - - - - - microfibril associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1075]
47. npepl1 ENSDARG00000012871 3064 0.836 - - - - - 0.836 - - - aminopeptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-177]
48. CACFD1 ENSDARG00000090818 1298 0.835 - 0.835 - - - - - - - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
49. gpatch8 ENSDARG00000059768 2743 0.835 - 0.835 - - - - - - - G patch domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030131-6966]
50. tprg1l ENSDARG00000068149 1605 0.835 - 0.835 - - - - - - - tumor protein p63 regulated 1-like [Source:ZFIN;Acc:ZDB-GENE-070531-2]
51. PREB ENSDARG00000101602 626 0.835 - 0.835 - - - - - - - prolactin regulatory element binding [Source:ZFIN;Acc:ZDB-GENE-040718-385]
52. cnep1r1 ENSDARG00000036064 1440 0.834 - - - - - - - 0.834 - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050417-425]
53. sema3ga ENSDARG00000042545 1603 0.834 - - - - - 0.834 - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga [Source:ZFIN;Acc:ZDB-GENE-050513-3]
54. tango6 ENSDARG00000034001 203 0.833 - 0.833 - - - - - - - transport and golgi organization 6 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050419-237]
55. ssh2a ENSDARG00000088440 1149 0.832 - 0.832 - - - - - - - slingshot protein phosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3810]
56. cab39l1 ENSDARG00000021374, ENSDARG00000112995 2033 0.832 - - - - - 0.832 - - - calcium binding protein 39, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2897]
57. nck2b ENSDARG00000043361 908 0.832 - 0.832 - - - - - - - NCK adaptor protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-235]
58. mtss1 ENSDARG00000059604 837 0.83 - 0.830 - - - - - - - metastasis suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081105-141]
59. BX571715.2 BX571715.2 1316 0.83 - - - - - 0.830 - - -
60. CLEC19A ENSDARG00000113127, ENSDARG00000115545 486 0.829 - 0.829 - - - - - - - C-type lectin domain containing 19A [Source:ZFIN;Acc:ZDB-GENE-080917-46]
61. cops4 ENSDARG00000043732 1508 0.829 - 0.829 - - - - - - - COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-030131-4317]
62. ZDHHC20_1 ZDHHC20_1 440 0.826 - - - - - - - 0.826 -
63. rbbp5 ENSDARG00000042147 702 0.823 - 0.823 - - - - - - - retinoblastoma binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-040426-886]
64. sh3glb2a ENSDARG00000008983 452 0.822 - 0.822 - - - - - - - SH3-domain GRB2-like endophilin B2a [Source:ZFIN;Acc:ZDB-GENE-061201-8]
65. otud3 ENSDARG00000022648 263 0.82 - - - - - - - 0.820 - OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
66. pphln1 ENSDARG00000045692 1023 0.82 - 0.820 - - - - - - - periphilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1873]
67. sox5 ENSDARG00000011582 3632 0.819 - 0.819 - - - - - - - SRY (sex determining region Y)-box 5 [Source:ZFIN;Acc:ZDB-GENE-000607-13]
68. anxa13 ENSDARG00000013976 2476 0.818 - 0.818 - - - - - - - annexin A13 [Source:ZFIN;Acc:ZDB-GENE-010406-1]
69. si:dkey-121j17.6 ENSDARG00000069661 456 0.817 - - - - - - - 0.817 - si:dkey-121j17.6 [Source:ZFIN;Acc:ZDB-GENE-121214-361]
70. ANKRD40 ENSDARG00000076490 748 0.817 - - - - - - - 0.817 - ankyrin repeat domain 40 [Source:ZFIN;Acc:ZDB-GENE-120612-2]
71. cyba ENSDARG00000018283 702 0.817 - 0.817 - - - - - - - cytochrome b-245, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-1526]
72. asxl1 ENSDARG00000036956, ENSDARG00000115751 2955 0.817 - 0.817 - - - - - - - ASXL transcriptional regulator 1 [Source:ZFIN;Acc:ZDB-GENE-091116-9]
73. tpd52l1 ENSDARG00000042548 61 0.816 - - - - - - - 0.816 - tumor protein D52-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-121]
74. tnfsf10l ENSDARG00000004196, ENSDARG00000110725 1756 0.815 - 0.815 - - - - - - - TNF superfamily member 10, like [Source:ZFIN;Acc:ZDB-GENE-010801-1]
75. ube2j1 ENSDARG00000033489 497 0.815 - 0.815 - - - - - - - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
76. tsc22d2 ENSDARG00000041839 1109 0.814 - - - - - 0.814 - - - TSC22 domain family 2 [Source:ZFIN;Acc:ZDB-GENE-031001-12]
77. mtmr7a ENSDARG00000037101, ENSDARG00000111336 161 0.814 - - - - - - - 0.814 - myotubularin related protein 7a [Source:ZFIN;Acc:ZDB-GENE-060421-7754]
78. ccnl1a ENSDARG00000055124, ENSDARG00000116311 2174 0.813 - - - - - - - 0.813 - cyclin L1a [Source:ZFIN;Acc:ZDB-GENE-050419-206]
79. cdk9 ENSDARG00000044811, ENSDARG00000111590 2524 0.812 - 0.812 - - - - - - - cyclin-dependent kinase 9 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-030131-321]
80. MBD1 MBD1 557 0.812 - - 0.812 - - - - - -
81. map2k7 ENSDARG00000008279 285 0.812 - 0.812 - - - - - - - mitogen-activated protein kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-090312-186]
82. raph1 raph1 442 0.811 - 0.811 - - - - - - -
83. fam173b ENSDARG00000033451 513 0.811 - 0.811 - - - - - - - family with sequence similarity 173, member B [Source:ZFIN;Acc:ZDB-GENE-041114-90]
84. C3H16orf89 C3H16orf89 449 0.811 - - - - - - - 0.811 -
85. CD93 CD93 270 0.81 - - - - - - - 0.810 -
86. MSI1 ENSDARG00000010710 478 0.81 - 0.810 - - - - - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
87. CABZ01063556.1 ENSDARG00000116344 319 0.81 - - - - - - - 0.810 - L antigen family member 3 [Source:NCBI gene;Acc:100536597]
88. pdcd2l ENSDARG00000002754 417 0.809 - 0.809 - - - - - - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
89. alox5 alox5 406 0.808 - - - - - - - 0.808 -
90. itgb6 ENSDARG00000002494 559 0.808 - 0.808 - - - - - - - integrin, beta 6 [Source:ZFIN;Acc:ZDB-GENE-100812-2]
91. ck2a2a ck2a2a 1695 0.808 - - - - - - 0.808 - -
92. OXSM ENSDARG00000098855 253 0.807 - - - - - - - 0.807 - 3-oxoacyl-ACP synthase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-170215-2]
93. PROSER1 ENSDARG00000086302 1935 0.807 - 0.807 - - - - - - - proline and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-111003-1]
94. uggt2 ENSDARG00000062089 661 0.807 - 0.807 - - - - - - - UDP-glucose glycoprotein glucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050517-21]
95. si:ch211-264e16.1 ENSDARG00000068947 1358 0.806 - - - - - - - 0.806 - si:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]
96. dusp11 ENSDARG00000038156 2490 0.806 - - - - - 0.806 - - - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
97. si:dkeyp-27e10.3 ENSDARG00000063008 369 0.805 - - - - - - - 0.805 - si:dkeyp-27e10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-96]
98. ints8 ENSDARG00000057986 1063 0.805 - - - - - - - 0.805 - integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
99. BX957278.1 ENSDARG00000010940 317 0.805 - 0.805 - - - - - - -
100. cd151 ENSDARG00000038288 975 0.805 - 0.805 - - - - - - - CD151 molecule [Source:ZFIN;Acc:ZDB-GENE-041010-137]

There are 728 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA