Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mrps18c

Gene Name Gene ID Reads Annotation
mrps18c ENSDARG00000069624, ENSDARG00000114200 983 mitochondrial ribosomal protein S18C [Source:ZFIN;Acc:ZDB-GENE-060503-609]










Genes with expression patterns similar to mrps18c

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mrps18c ENSDARG00000069624, ENSDARG00000114200 983 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein S18C [Source:ZFIN;Acc:ZDB-GENE-060503-609]
2. zgc:175214 ENSDARG00000022891 1013 1.632 - 0.821 - - - - 0.811 - - zgc:175214 [Source:ZFIN;Acc:ZDB-GENE-080303-32]
3. tmem53 ENSDARG00000038789 411 1.578 - 0.857 - - - - 0.721 - - transmembrane protein 53 [Source:ZFIN;Acc:ZDB-GENE-040718-384]
4. klhl41a ENSDARG00000068888 1034 1.577 - 0.803 - - - - 0.774 - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
5. rfc5 ENSDARG00000035634 974 1.562 - 0.791 - - - - 0.771 - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
6. fxn ENSDARG00000074356 524 1.531 - 0.784 - - - - 0.747 - - frataxin [Source:ZFIN;Acc:ZDB-GENE-070209-286]
7. gemin2 ENSDARG00000015638 886 1.495 - 0.718 - - - - 0.777 - - gem (nuclear organelle) associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3756]
8. TRIM63 TRIM63 1600 1.494 0.701 0.793 - - - - - - -
9. si:ch211-76m11.11 si:ch211-76m11.11 460 1.484 - 0.734 - - - 0.750 - - -
10. r3hdm1 ENSDARG00000101458 5241 1.446 - - - - - 0.704 0.742 - - R3H domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7119]
11. asap1a ENSDARG00000029463 1566 1.439 - 0.708 - - - - 0.731 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]
12. fam195b 1159 1.409 - - - - - 0.705 0.704 - - family with sequence similarity 195, member B
13. kirrela 1170 0.924 - - - - - - 0.924 - - kin of IRRE like a, transcript variant X2
14. ppig ENSDARG00000044431 3427 0.888 - - - - - - 0.888 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
15. ndufaf5 ENSDARG00000061629 421 0.878 - - - - - - 0.878 - - NADH:ubiquinone oxidoreductase complex assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-070410-110]
16. aebp1 ENSDARG00000091726 906 0.876 - - - - - - 0.876 - - AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
17. polr3e ENSDARG00000037358 1864 0.874 - - - - - - 0.874 - - polymerase (RNA) III (DNA directed) polypeptide E [Source:ZFIN;Acc:ZDB-GENE-030131-8462]
18. rgs6 ENSDARG00000015627 669 0.872 - 0.872 - - - - - - - regulator of G protein signaling 6 [Source:ZFIN;Acc:ZDB-GENE-030131-31]
19. slmo2 slmo2 5559 0.872 - - - - - - 0.872 - -
20. si:dkey-153m14.1 si:dkey-153m14.1 4591 0.865 - - - - - - 0.865 - -
21. eif3eb ENSDARG00000002549, ENSDARG00000113466 223 0.863 - 0.863 - - - - - - - eukaryotic translation initiation factor 3, subunit E, b [Source:ZFIN;Acc:ZDB-GENE-050208-283]
22. rad54b ENSDARG00000092134 231 0.859 - - - - - - 0.859 - - RAD54 homolog B [Source:ZFIN;Acc:ZDB-GENE-060810-50]
23. C13H9orf72 C13H9orf72 2310 0.855 - 0.855 - - - - - - -
24. ndc1 ENSDARG00000021120 2417 0.854 - - - - - - 0.854 - - NDC1 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-7176]
25. HBQ1 HBQ1 413 0.852 - 0.852 - - - - - - -
26. MZT1 ENSDARG00000096668 2514 0.85 - - - - - - 0.850 - - mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]
27. MSL1_1 MSL1_1 2365 0.85 - - - - - - 0.850 - -
28. tsen2 ENSDARG00000091851 1467 0.849 - 0.849 - - - - - - - TSEN2 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-060929-918]
29. cyb561a3a ENSDARG00000056281 667 0.849 - - - - - - 0.849 - - cytochrome b561 family, member A3a [Source:ZFIN;Acc:ZDB-GENE-060526-374]
30. mov10b.1 ENSDARG00000061177 370 0.848 - 0.848 - - - - - - - Moloney leukemia virus 10b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9089]
31. brd8 ENSDARG00000025071 2605 0.848 - 0.848 - - - - - - - bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
32. etv4 ENSDARG00000018303, ENSDARG00000115855 3889 0.846 - - - - - - 0.846 - - ets variant 4 [Source:ZFIN;Acc:ZDB-GENE-990415-71]
33. si:dkey-285e18.8 si:dkey-285e18.8 170 0.844 - 0.844 - - - - - - -
34. DST ENSDARG00000101858 4395 0.842 - - - - - - 0.842 - - dystonin [Source:HGNC Symbol;Acc:HGNC:1090]
35. caprin1b ENSDARG00000054272 7033 0.841 - - - - - - 0.841 - - cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
36. znf346 ENSDARG00000060695 3942 0.84 - - - - - - 0.840 - - zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
37. dhx37 ENSDARG00000062612 488 0.84 - 0.840 - - - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Source:ZFIN;Acc:ZDB-GENE-030131-4505]
38. emc4 ENSDARG00000039268 553 0.839 - - - - - - 0.839 - - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
39. pa2g4b ENSDARG00000070657 7999 0.838 - - - - - - 0.838 - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
40. NEDD4 NEDD4 2040 0.836 - - - - - - 0.836 - -
41. C20H1orf112 C20H1orf112 316 0.834 - 0.834 - - - - - - -
42. ptprz1a ENSDARG00000051814 385 0.834 - 0.834 - - - - - - - protein tyrosine phosphatase, receptor-type, Z polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-090406-1]
43. cdk2ap2 ENSDARG00000103145 8024 0.834 - - - - - - 0.834 - - cyclin-dependent kinase 2 associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040718-35]
44. FRMD4A ENSDARG00000042249 2883 0.833 - - - - - - 0.833 - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
45. tmem70 ENSDARG00000078773 1290 0.832 - - - - - - 0.832 - - transmembrane protein 70 [Source:ZFIN;Acc:ZDB-GENE-070912-593]
46. fnta ENSDARG00000099143 1845 0.832 - - - - - - 0.832 - - farnesyltransferase, CAAX box, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-866]
47. cmtm3 ENSDARG00000008811, ENSDARG00000115417 502 0.832 - - - - - - 0.832 - - CKLF-like MARVEL transmembrane domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040801-206]
48. add2 ENSDARG00000074581 1402 0.832 - 0.832 - - - - - - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
49. si:dkeyp-69b9.3 ENSDARG00000088881 109 0.832 - 0.832 - - - - - - - si:dkeyp-69b9.3 [Source:ZFIN;Acc:ZDB-GENE-100922-275]
50. apobec2a ENSDARG00000018881 4790 0.831 - 0.831 - - - - - - - apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
51. ZNF70_2 ZNF70_2 1866 0.831 - - - - - - 0.831 - -
52. mrps10 ENSDARG00000045913 1453 0.831 - - - - - - 0.831 - - mitochondrial ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040914-39]
53. ramp2 ENSDARG00000037895 633 0.83 - - - - - - 0.830 - - receptor (G protein-coupled) activity modifying protein 2 [Source:ZFIN;Acc:ZDB-GENE-080204-79]
54. u2af2a ENSDARG00000012505 2920 0.829 - - - - - - 0.829 - - U2 small nuclear RNA auxiliary factor 2a [Source:ZFIN;Acc:ZDB-GENE-050706-131]
55. tmem50a ENSDARG00000015757 3244 0.828 - - - - - - 0.828 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
56. gfer ENSDARG00000070061 1119 0.827 - - - - - - 0.827 - - growth factor, augmenter of liver regeneration (ERV1 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060810-186]
57. kbtbd12 ENSDARG00000001882 1196 0.827 - 0.827 - - - - - - - kelch repeat and BTB (POZ) domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-050904-1]
58. si:ch211-242b18.1 ENSDARG00000054723 2929 0.825 - 0.825 - - - - - - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
59. gpx7 ENSDARG00000091511 3045 0.823 - - - - - - 0.823 - - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
60. CABZ01044943.1 CABZ01044943.1 309 0.823 - 0.823 - - - - - - -
61. sdhaf2 ENSDARG00000062971, ENSDARG00000114840 1320 0.821 - - - - - - 0.821 - - succinate dehydrogenase complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7564]
62. rsu1 ENSDARG00000102885 3604 0.821 - - - - - - 0.821 - - Ras suppressor protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-518]
63. hoxc4a ENSDARG00000070338 1382 0.821 - 0.821 - - - - - - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
64. ctdspla ENSDARG00000071673 1447 0.821 - - - - - - 0.821 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
65. stk11 ENSDARG00000046074 506 0.82 - - - - - - 0.820 - - serine/threonine kinase 11 [Source:ZFIN;Acc:ZDB-GENE-050417-383]
66. fitm1 ENSDARG00000056464 1759 0.819 - 0.819 - - - - - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
67. mettl2a ENSDARG00000008105, ENSDARG00000113100 1036 0.818 - - - - - - 0.818 - - methyltransferase like 2A [Source:ZFIN;Acc:ZDB-GENE-050417-462]
68. ccdc28b ENSDARG00000011222 528 0.816 - 0.816 - - - - - - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
69. rltpr 258 0.815 - 0.815 - - - - - - - RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing, transcript variant X1
70. wsb1 ENSDARG00000021343 3828 0.815 - - - - - - 0.815 - - WD repeat and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1946]
71. TSSC4 ENSDARG00000036144 1994 0.815 - - - - - - 0.815 - - tumor suppressing subtransferable candidate 4 [Source:ZFIN;Acc:ZDB-GENE-060825-263]
72. hira ENSDARG00000013434 2204 0.813 - 0.813 - - - - - - - histone cell cycle regulator a [Source:ZFIN;Acc:ZDB-GENE-030131-6296]
73. st13 ENSDARG00000021973 7787 0.812 - - - - - - 0.812 - - ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
74. mif ENSDARG00000071336 1328 0.811 - 0.811 - - - - - - - macrophage migration inhibitory factor [Source:ZFIN;Acc:ZDB-GENE-080708-1]
75. NCOA7 NCOA7 658 0.811 - 0.811 - - - - - - -
76. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 0.811 - - - - - - 0.811 - - NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
77. ube2g1b ENSDARG00000069527 5376 0.81 - - - - - - 0.810 - - ubiquitin-conjugating enzyme E2G 1b (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2939]
78. mfap2 ENSDARG00000059367 3774 0.81 - - - - - - 0.810 - - microfibril associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6710]
79. ucp3 ENSDARG00000091209 137 0.81 - 0.810 - - - - - - - uncoupling protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1317]
80. gpsm1b ENSDARG00000054874 1308 0.809 - 0.809 - - - - - - - G protein signaling modulator 1b [Source:ZFIN;Acc:ZDB-GENE-110203-5]
81. CABZ01028770.1 ENSDARG00000099506 700 0.808 - - - - - - 0.808 - - ras-related C3 botulinum toxin substrate 1-like [Source:NCBI gene;Acc:100537765]
82. suz12a ENSDARG00000070256 2229 0.807 - - - - - - 0.807 - - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
83. polr1a ENSDARG00000098375 1224 0.807 - 0.807 - - - - - - - RNA polymerase I subunit A [Source:ZFIN;Acc:ZDB-GENE-030131-5286]
84. ndufa2 ENSDARG00000021984 4754 0.807 - - - - - - 0.807 - - NADH:ubiquinone oxidoreductase subunit A2 [Source:ZFIN;Acc:ZDB-GENE-050522-377]
85. gnl3 ENSDARG00000006219 3854 0.805 - - - - - 0.805 - - - guanine nucleotide binding protein-like 3 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-030131-616]
86. slc35d1a ENSDARG00000011973 670 0.805 - - - - - - 0.805 - - solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1a [Source:ZFIN;Acc:ZDB-GENE-040826-5]
87. slc4a4a ENSDARG00000013730 1441 0.804 - - - - - - 0.804 - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4a [Source:ZFIN;Acc:ZDB-GENE-060526-274]
88. casq1b ENSDARG00000018105 2643 0.804 - 0.804 - - - - - - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
89. lpl ENSDARG00000087697 2578 0.804 - 0.804 - - - - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
90. ube2d4 ENSDARG00000015057 1089 0.803 - 0.803 - - - - - - - ubiquitin-conjugating enzyme E2D 4 (putative) [Source:ZFIN;Acc:ZDB-GENE-070424-86]
91. prune ENSDARG00000076246, ENSDARG00000115232 875 0.803 - - - - - - 0.803 - - prune exopolyphosphatase [Source:ZFIN;Acc:ZDB-GENE-100609-1]
92. ssbp1 ENSDARG00000039350 809 0.803 - 0.803 - - - - - - - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
93. denr ENSDARG00000037229 8370 0.802 - - - - - - 0.802 - - density-regulated protein [Source:ZFIN;Acc:ZDB-GENE-040718-450]
94. wfdc2 ENSDARG00000089187 653 0.802 - 0.802 - - - - - - - WAP four-disulfide core domain 2 [Source:ZFIN;Acc:ZDB-GENE-090313-47]
95. PPIP5K1 PPIP5K1 997 0.802 - 0.802 - - - - - - -
96. TMPO TMPO 3264 0.8 - 0.800 - - - - - - -
97. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 0.8 - - - - - - 0.800 - - ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
98. MRPL55 MRPL55 1711 0.799 - - - - - - 0.799 - -
99. MAP3K15 ENSDARG00000013310, ENSDARG00000110884 1232 0.799 - - - - - - 0.799 - - mitogen-activated protein kinase kinase kinase 15 [Source:ZFIN;Acc:ZDB-GENE-091204-246]
100. mettl20 56 0.798 - 0.798 - - - - - - - methyltransferase like 20

There are 606 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA