Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mrps18b

Gene Name Gene ID Reads Annotation
mrps18b ENSDARG00000007065 2121 mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]










Genes with expression patterns similar to mrps18b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mrps18b ENSDARG00000007065 2121 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
2. mrps15 ENSDARG00000109289 3258 3.155 0.712 0.799 0.891 - - - 0.753 - - mitochondrial ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-040718-188]
3. supt16h ENSDARG00000079949 4755 2.597 - 0.741 0.953 - - - - - 0.903 SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
4. yth2 yth2 3716 2.551 - 0.775 0.975 - - - 0.801 - -
5. cacng1 cacng1 3118 2.508 0.756 0.891 - - - - - 0.861 -
6. CDIP1 ENSDARG00000076118 1294 2.506 - - - - - - 0.709 0.874 0.923 cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]
7. PHB2 PHB2 3755 2.491 - 0.901 - - - - 0.729 - 0.861
8. eif2s1b ENSDARG00000052178 11961 2.388 - - 0.930 - - - 0.728 0.730 - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
9. mrps2 ENSDARG00000103198 2410 2.375 - 0.737 - - - - 0.772 - 0.866 mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
10. alpk3a ENSDARG00000078989 1992 2.284 0.706 0.870 - - - - 0.708 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
11. dnajc19 ENSDARG00000044420 1756 2.262 - 0.745 - - - - 0.706 - 0.811 DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1730]
12. pitrm1 ENSDARG00000038563, ENSDARG00000115745 1321 2.261 0.718 0.823 - - - - 0.720 - - pitrilysin metallopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2876]
13. cars ENSDARG00000036164 2019 2.237 - 0.702 - - - 0.744 - - 0.791 cysteinyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030328-29]
14. minos1 ENSDARG00000101619 5273 2.155 0.704 0.711 - - - - 0.740 - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
15. mrps16 ENSDARG00000098972, ENSDARG00000115452 2085 2.154 0.715 0.732 - - - - 0.707 - - mitochondrial ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-041010-123]
16. hdac10 ENSDARG00000086458 676 1.922 - - 0.991 - - - - - 0.931 histone deacetylase 10 [Source:ZFIN;Acc:ZDB-GENE-030131-5464]
17. dhdds ENSDARG00000039851 1135 1.903 - - 0.991 - - - - - 0.912 dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
18. wdr45 ENSDARG00000090219 829 1.89 - - 0.975 - - - - - 0.915 WD repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-040426-990]
19. six1b ENSDARG00000026473 1908 1.887 - 0.895 0.992 - - - - - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
20. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.878 - - - - - - - 0.986 0.892 FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
21. smtnl ENSDARG00000055632, ENSDARG00000109489 788 1.863 - 0.887 - - - - - 0.976 - smoothelin, like [Source:ZFIN;Acc:ZDB-GENE-040212-1]
22. creb1a ENSDARG00000053586 5068 1.838 - - 0.971 - - - - 0.867 - cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
23. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 1.826 - 0.850 0.976 - - - - - - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
24. mfn1b ENSDARG00000079219 1699 1.811 - 0.827 - - - - - 0.984 - mitofusin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1553]
25. pdzrn3b ENSDARG00000073869 1566 1.807 - 0.900 - - - - - - 0.907 PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
26. grpel2 ENSDARG00000069421 5673 1.796 - 0.809 0.987 - - - - - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
27. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.782 - 0.791 0.991 - - - - - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
28. cdkal1 ENSDARG00000104848 2102 1.78 - 0.884 0.896 - - - - - - CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
29. hs2st1a ENSDARG00000099478 864 1.775 - - - - - - 0.798 0.977 - heparan sulfate 2-O-sulfotransferase 1a [Source:ZFIN;Acc:ZDB-GENE-070112-2312]
30. dna2 ENSDARG00000078759 846 1.773 - 0.782 0.991 - - - - - - DNA replication helicase/nuclease 2 [Source:ZFIN;Acc:ZDB-GENE-090313-71]
31. syncripl ENSDARG00000026723 3889 1.763 - - - - - - - 0.931 0.832 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
32. TCEB3 2429 1.759 - - 0.990 - - - - - 0.769 transcription elongation factor B (SIII), polypeptide 3
33. igfbp5b ENSDARG00000025348 3803 1.757 - 0.812 - - - - - 0.945 - insulin-like growth factor binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-040319-2]
34. sesn3 ENSDARG00000015822 5328 1.748 - - 0.991 - - - - - 0.757 sestrin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2924]
35. TNPO2 ENSDARG00000042887 2290 1.747 - - - - - - - 0.897 0.850 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
36. wu:fb17g07 wu:fb17g07 10567 1.744 - 0.846 - - - - - 0.898 -
37. tmem47 ENSDARG00000057322 4691 1.743 - 0.760 0.983 - - - - - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
38. zgc:113278 ENSDARG00000037813 525 1.742 - 0.756 - - - - - 0.986 - zgc:113278 [Source:ZFIN;Acc:ZDB-GENE-050327-66]
39. nol12 ENSDARG00000038027 2288 1.741 - 0.748 0.993 - - - - - - nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
40. slc1a6 ENSDARG00000010096 764 1.736 - 0.743 0.993 - - - - - - solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-071004-45]
41. ppp1r14bb ENSDARG00000030161 2349 1.733 - - 0.994 - - - 0.739 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Bb [Source:ZFIN;Acc:ZDB-GENE-030616-595]
42. pes ENSDARG00000018902 3286 1.726 - 0.870 - - - - - - 0.856 pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
43. MRPS36 ENSDARG00000079823, ENSDARG00000113427 3694 1.726 - - - - - - 0.801 0.925 - mitochondrial ribosomal protein S36 [Source:ZFIN;Acc:ZDB-GENE-081104-343]
44. lnpep ENSDARG00000100394 1436 1.719 - 0.869 - - - - - - 0.850 leucyl/cystinyl aminopeptidase [Source:ZFIN;Acc:ZDB-GENE-030131-1534]
45. scaf4a ENSDARG00000077093 2408 1.713 - 0.735 - - - - - 0.978 - SR-related CTD-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9003]
46. SH3BGRL ENSDARG00000058302 4525 1.713 - - 0.965 - - - - - 0.748 SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
47. pdhx ENSDARG00000051756 924 1.712 - 0.884 - - - - 0.828 - - pyruvate dehydrogenase complex, component X [Source:ZFIN;Acc:ZDB-GENE-040426-1539]
48. mlf1 ENSDARG00000077301 789 1.703 - 0.719 - - - - - 0.984 - myeloid leukemia factor 1 [Source:ZFIN;Acc:ZDB-GENE-080917-7]
49. mrps18a ENSDARG00000024465 5187 1.696 - - 0.982 - - - 0.714 - - mitochondrial ribosomal protein S18A [Source:ZFIN;Acc:ZDB-GENE-041210-109]
50. dtnbp1a ENSDARG00000055115 976 1.696 - - - - - - 0.712 0.984 - dystrobrevin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1036]
51. hspa4a ENSDARG00000004754 3439 1.694 - - 0.984 - - - 0.710 - - heat shock protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2832]
52. sars ENSDARG00000008237 3330 1.691 - 0.856 - - - - - 0.835 - seryl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040831-1]
53. slc27a1a ENSDARG00000006240, ENSDARG00000109799 1471 1.691 - 0.727 - - - - - 0.964 - solute carrier family 27 (fatty acid transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050320-112]
54. sod2 ENSDARG00000042644 1382 1.686 - - - - - - 0.800 0.886 - superoxide dismutase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7742]
55. tmem63bb ENSDARG00000106631 503 1.685 - 0.753 - - - - - - 0.932 transmembrane protein 63Bb [Source:NCBI gene;Acc:569678]
56. ryr3 ENSDARG00000071331 6795 1.684 0.834 0.850 - - - - - - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
57. bahcc1 bahcc1 1934 1.679 - - - - - - - 0.754 0.925
58. PARL 2511 1.677 - - - - - 0.763 - - 0.914 presenilin associated rhomboid like
59. eif2s3 ENSDARG00000008292 17051 1.676 - 0.821 0.855 - - - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
60. mrpl38 ENSDARG00000039667 1145 1.67 - 0.842 - - - - 0.828 - - mitochondrial ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-040426-2373]
61. egln1 egln1 3746 1.665 - - - - 0.706 - - 0.959 -
62. rbm34 ENSDARG00000101877 1573 1.664 - - - - - - 0.742 - 0.922 RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
63. prkrip1 ENSDARG00000033126, ENSDARG00000113803 1634 1.662 - 0.764 - - - - - - 0.898 PRKR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-111011-2]
64. zgc:109949 ENSDARG00000103413 426 1.662 - 0.756 - - - - - - 0.906 zgc:109949 [Source:ZFIN;Acc:ZDB-GENE-050522-166]
65. supt6h ENSDARG00000006524 3221 1.657 - 0.871 - - - - - - 0.786 SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
66. klhl40a ENSDARG00000039052 2537 1.656 0.767 0.889 - - - - - - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
67. ZBTB16 ZBTB16 3385 1.655 - - - - - - - 0.904 0.751
68. naa25 ENSDARG00000075446 1505 1.655 - - - - - 0.724 - - 0.931 N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:ZFIN;Acc:ZDB-GENE-041111-190]
69. uros ENSDARG00000027491 1147 1.653 - 0.709 - - - - - 0.944 - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
70. cks2 ENSDARG00000071410, ENSDARG00000116198 966 1.652 - 0.767 - - - - - - 0.885 CDC28 protein kinase regulatory subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050208-508]
71. dkk3b ENSDARG00000070683 209 1.651 - - - - - - 0.734 - 0.917 dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]
72. cyth1a ENSDARG00000005159, ENSDARG00000076742 2796 1.651 - - - - - - 0.710 0.941 - cytohesin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-657]
73. arhgef4 ENSDARG00000012914 1464 1.65 - 0.806 - - - - - - 0.844 Rho guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-575]
74. ptprk ENSDARG00000063416 742 1.65 - 0.731 - - - - - - 0.919 protein tyrosine phosphatase, receptor type, K [Source:ZFIN;Acc:ZDB-GENE-030131-9834]
75. si:dkey-10p5.10 ENSDARG00000099307 371 1.648 - 0.715 - - - - - - 0.933 si:dkey-10p5.10 [Source:ZFIN;Acc:ZDB-GENE-120215-130]
76. ndufa6 ENSDARG00000038028 2653 1.648 - 0.841 - - - - - - 0.807 NADH:ubiquinone oxidoreductase subunit A6 [Source:ZFIN;Acc:ZDB-GENE-040426-1124]
77. CCDC86 CCDC86 2023 1.647 0.749 0.898 - - - - - - -
78. BX294434.1 ENSDARG00000061272 6493 1.647 0.795 0.852 - - - - - - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
79. NUMA1_2 NUMA1_2 2897 1.646 - - - - - 0.723 - - 0.923
80. timm8b ENSDARG00000055708 7291 1.641 - 0.849 - - - - 0.792 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
81. eya3 ENSDARG00000036100 1965 1.641 - - - - - - 0.735 - 0.906 EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
82. phc2b_1 ENSDARG00000013224 1316 1.638 - 0.727 - - - - - - 0.911 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
83. hsd17b10 ENSDARG00000017781 1793 1.638 - 0.888 - - - - 0.750 - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
84. plecb ENSDARG00000021987 13621 1.637 0.722 0.915 - - - - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
85. ttc21b ENSDARG00000012368 229 1.637 0.711 - - - - - - - 0.926 tetratricopeptide repeat domain 21B [Source:ZFIN;Acc:ZDB-GENE-031010-34]
86. arpp21 ENSDARG00000061081 892 1.637 0.737 0.900 - - - - - - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
87. ipo4 ENSDARG00000041493 1578 1.637 - 0.862 - - - 0.775 - - - importin 4 [Source:ZFIN;Acc:ZDB-GENE-041014-307]
88. WDR77 2463 1.637 - 0.745 0.892 - - - - - - WD repeat domain 77
89. eif4e3 ENSDARG00000005078 1624 1.635 - 0.737 - - - - - - 0.898 eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
90. ssb ENSDARG00000029252 3394 1.631 - 0.818 - - - - - - 0.813 Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]
91. CU638714.1 ENSDARG00000100303 2132 1.63 0.864 0.766 - - - - - - -
92. ccdc82 ENSDARG00000014966 563 1.63 - - - - - 0.716 - - 0.914 coiled-coil domain containing 82 [Source:ZFIN;Acc:ZDB-GENE-030131-5749]
93. klhl21 ENSDARG00000039255 2550 1.63 - 0.875 - - - - 0.755 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
94. fam203a fam203a 570 1.627 0.804 0.823 - - - - - - -
95. atp5j 4272 1.627 - - - - - - 0.763 0.864 - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
96. mybphb ENSDARG00000003081 5208 1.625 - 0.881 - - - - - 0.744 - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
97. zgc:66479 ENSDARG00000008732 3347 1.62 - 0.806 - - - - - 0.814 - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
98. ankzf1 ENSDARG00000041904 917 1.618 - 0.702 - - - - - - 0.916 ankyrin repeat and zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050309-80]
99. pdcd11 ENSDARG00000052480 2791 1.615 - 0.737 - - - - - - 0.878 programmed cell death 11 [Source:ZFIN;Acc:ZDB-GENE-030131-4076]
100. tmem248 ENSDARG00000018825 1560 1.613 - - - - - 0.765 - - 0.848 transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]

There are 1952 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA