Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mrps16

Gene Name Gene ID Reads Annotation
mrps16 ENSDARG00000098972, ENSDARG00000115452 2085 mitochondrial ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-041010-123]










Genes with expression patterns similar to mrps16

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mrps16 ENSDARG00000098972, ENSDARG00000115452 2085 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-041010-123]
2. tsr2 ENSDARG00000005772 1155 2.435 - 0.821 - - - - 0.810 0.804 - TSR2, 20S rRNA accumulation, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-021231-2]
3. apex1 ENSDARG00000045843 6345 2.365 0.761 0.827 - - - - 0.777 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
4. nudt3a ENSDARG00000016256 2713 2.337 0.724 0.799 - - - - 0.814 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
5. lrpprc ENSDARG00000043970 3847 2.337 0.712 0.818 - - - - 0.807 - - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
6. dnaja3a ENSDARG00000058494, ENSDARG00000111151 2497 2.321 - 0.786 - - - - 0.781 0.754 - DnaJ (Hsp40) homolog, subfamily A, member 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7837]
7. PHB2 PHB2 3755 2.3 0.792 0.733 - - - - 0.775 - -
8. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 2.287 0.708 0.791 - - - - 0.788 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
9. cd248b ENSDARG00000077938 2561 2.252 0.719 0.726 - - - - 0.807 - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
10. ntmt1 ENSDARG00000022399 5779 2.231 0.782 0.732 - - - - 0.717 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
11. srpk3 ENSDARG00000005916 1546 2.207 0.760 0.722 - - - - 0.725 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
12. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 2.196 0.706 0.756 - - - - 0.734 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
13. mrps18b ENSDARG00000007065 2121 2.154 0.715 0.732 - - - - 0.707 - - mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
14. hhatla ENSDARG00000039051 6598 1.66 0.832 0.828 - - - - - - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
15. sptb ENSDARG00000030490 7128 1.633 0.840 0.793 - - - - - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
16. gtf2b ENSDARG00000103578 1571 1.614 - 0.799 - - - - - 0.815 - general transcription factor IIB [Source:ZFIN;Acc:ZDB-GENE-030131-3544]
17. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.613 0.834 0.779 - - - - - - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
18. plecb ENSDARG00000021987 13621 1.612 0.843 0.769 - - - - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
19. nars ENSDARG00000061100 2948 1.61 0.761 0.849 - - - - - - - asparaginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-1016]
20. pygma ENSDARG00000055518 15972 1.608 0.851 0.757 - - - - - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
21. trim55a ENSDARG00000029596 2858 1.604 0.858 0.746 - - - - - - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
22. C13H10orf71 3489 1.6 0.839 0.761 - - - - - - - chromosome 13 C10orf71 homolog
23. C11H12orf10 C11H12orf10 1305 1.6 - 0.760 - - - - 0.840 - -
24. pbxip1a ENSDARG00000071015 4960 1.599 0.815 0.784 - - - - - - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
25. fat1 fat1 3934 1.599 0.773 0.826 - - - - - - -
26. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 1.598 - - - - - 0.795 0.803 - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
27. cacng1 cacng1 3118 1.598 0.854 0.744 - - - - - - -
28. cct8 ENSDARG00000008243 6843 1.589 - 0.816 - - - - 0.773 - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
29. PTP4A3 ENSDARG00000039997 3814 1.586 0.768 0.818 - - - - - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
30. limch1a ENSDARG00000074275 2981 1.583 0.800 0.783 - - - - - - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
31. txlnbb ENSDARG00000076241 6396 1.582 0.821 0.761 - - - - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
32. txn2 ENSDARG00000034777 4071 1.581 - 0.870 - - - - 0.711 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
33. pfdn2 ENSDARG00000025391, ENSDARG00000110096 3176 1.578 0.732 0.846 - - - - - - - prefoldin subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060519-27]
34. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.576 0.857 0.719 - - - - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
35. fam63b 484 1.574 - - - - - - 0.775 0.799 - family with sequence similarity 63, member B
36. alg3 ENSDARG00000053155 1843 1.574 - 0.768 - - - - 0.806 - - asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-050522-334]
37. adrm1 ENSDARG00000058560, ENSDARG00000113912 1728 1.574 - 0.704 - - - - - 0.870 - adhesion regulating molecule 1 [Source:ZFIN;Acc:ZDB-GENE-040426-905]
38. ITGB1BP2 ENSDARG00000030176 2472 1.573 0.823 - - - - - - 0.750 - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
39. PTPLA PTPLA 4044 1.572 0.829 0.743 - - - - - - -
40. dtnba ENSDARG00000077694 5483 1.571 0.771 0.800 - - - - - - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
41. mrps15 ENSDARG00000109289 3258 1.57 0.769 0.801 - - - - - - - mitochondrial ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-040718-188]
42. tufm ENSDARG00000104173 9292 1.57 0.784 - - - - - 0.786 - - Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
43. gpd1l ENSDARG00000040024 2182 1.57 - 0.746 - - - - 0.824 - - glycerol-3-phosphate dehydrogenase 1 like [Source:ZFIN;Acc:ZDB-GENE-041010-220]
44. phc2a ENSDARG00000056695, ENSDARG00000110253 1726 1.57 - 0.732 - - - - 0.838 - - polyhomeotic homolog 2a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020312-1]
45. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.568 - 0.859 - - - - 0.709 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
46. Sep-06 Sep-06 5465 1.567 - 0.829 - - - - 0.738 - -
47. grpel2 ENSDARG00000069421 5673 1.564 0.742 0.822 - - - - - - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
48. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.564 0.851 - - - - - 0.713 - -
49. mdh2 ENSDARG00000043371 14485 1.562 0.787 - - - - - 0.775 - - malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
50. vcl vcl 6667 1.562 0.846 0.716 - - - - - - -
51. sucla2 ENSDARG00000005359 5992 1.56 0.839 0.721 - - - - - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
52. EHBP1L1 EHBP1L1 2500 1.56 0.852 0.708 - - - - - - -
53. CCDC86 CCDC86 2023 1.56 0.808 0.752 - - - - - - -
54. smyd2b ENSDARG00000005629 8181 1.559 0.807 0.752 - - - - - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
55. si:ch1073-325m22.2 ENSDARG00000095921 8534 1.558 - 0.769 - - - - 0.789 - - si:ch1073-325m22.2 [Source:NCBI gene;Acc:100333135]
56. vwde ENSDARG00000103443 5758 1.556 0.778 0.778 - - - - - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
57. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.555 0.818 0.737 - - - - - - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
58. cnbpb ENSDARG00000070922 14606 1.553 0.789 - - - - - 0.764 - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
59. cdkn3 ENSDARG00000039130 1051 1.553 0.718 - - - - - 0.835 - - cyclin-dependent kinase inhibitor 3 [Source:ZFIN;Acc:ZDB-GENE-060427-2]
60. znf598 ENSDARG00000014945 1838 1.553 - 0.731 - - - - - 0.822 - zinc finger protein 598 [Source:ZFIN;Acc:ZDB-GENE-060602-3]
61. mark2b ENSDARG00000032458 821 1.551 - - - - - - 0.790 0.761 - MAP/microtubule affinity-regulating kinase 2b [Source:ZFIN;Acc:ZDB-GENE-080215-4]
62. MYOM1 MYOM1 3870 1.551 0.847 0.704 - - - - - - -
63. pcmt ENSDARG00000015201 5132 1.55 - 0.751 - - - - 0.799 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
64. C1QBP ENSDARG00000039887 11186 1.549 0.830 - - - - - 0.719 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
65. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 1.546 0.836 0.710 - - - - - - - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
66. mrps34 ENSDARG00000057910 2007 1.544 - 0.771 - - - - 0.773 - - mitochondrial ribosomal protein S34 [Source:ZFIN;Acc:ZDB-GENE-041114-71]
67. hmbsb ENSDARG00000055991 3037 1.542 - 0.777 - - - - 0.765 - - hydroxymethylbilane synthase, b [Source:ZFIN;Acc:ZDB-GENE-050522-491]
68. fermt2 ENSDARG00000020242 9351 1.54 0.808 - - - - - 0.732 - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
69. CABZ01074435.1 CABZ01074435.1 4551 1.539 0.824 - - - - - 0.715 - -
70. celf2 ENSDARG00000002131, ENSDARG00000110267 15605 1.537 - 0.783 - - - - 0.754 - - cugbp, Elav-like family member 2 [Source:ZFIN;Acc:ZDB-GENE-030826-35]
71. slc25a12 ENSDARG00000102362 2773 1.535 - 0.807 - - - - - 0.728 - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
72. asns ENSDARG00000016375 1606 1.534 - 0.777 - - - - - 0.757 - asparagine synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1091]
73. pwp2h ENSDARG00000037109 1395 1.533 0.773 0.760 - - - - - - - PWP2 periodic tryptophan protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-021031-3]
74. apobec2a ENSDARG00000018881 4790 1.533 0.831 0.702 - - - - - - - apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
75. myoz2b ENSDARG00000037266 2139 1.531 0.775 0.756 - - - - - - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
76. ptrfa ptrfa 4363 1.531 0.760 0.771 - - - - - - -
77. rbms2b ENSDARG00000056150, ENSDARG00000115483 2104 1.53 - 0.757 - - - - 0.773 - - RNA binding motif, single stranded interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-51]
78. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 1.53 0.743 - - - - - 0.787 - - aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]
79. vrk1 ENSDARG00000018006 1759 1.529 - - - - - 0.776 0.753 - - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
80. psmd1 ENSDARG00000003189 4373 1.529 - 0.781 - - - 0.748 - - - proteasome 26S subunit, non-ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-810]
81. zgc:153662 zgc:153662 4604 1.528 0.806 0.722 - - - - - - -
82. znf106a ENSDARG00000016651 6049 1.527 0.793 0.734 - - - - - - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
83. blzf1 ENSDARG00000011299 2568 1.526 - 0.785 - - - - 0.741 - - basic leucine zipper nuclear factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-1]
84. cyp4t8 ENSDARG00000004964, ENSDARG00000116412 1111 1.526 0.811 0.715 - - - - - - - cytochrome P450, family 4, subfamily T, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-031219-3]
85. fam203a fam203a 570 1.525 0.792 0.733 - - - - - - -
86. cacnb1 ENSDARG00000002167 1402 1.525 0.813 0.712 - - - - - - - calcium channel, voltage-dependent, beta 1 subunit [Source:ZFIN;Acc:ZDB-GENE-040718-399]
87. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.524 0.767 - - - - - 0.757 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
88. adsl ENSDARG00000017049, ENSDARG00000111547, ENSDARG00000116659 1430 1.524 - - - - - 0.801 0.723 - - adenylosuccinate lyase [Source:ZFIN;Acc:ZDB-GENE-030131-6363]
89. rreb1b ENSDARG00000042652 2731 1.524 - 0.804 - - - - 0.720 - - ras responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-070912-273]
90. hapln1a ENSDARG00000089769 12334 1.523 0.765 0.758 - - - - - - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
91. PCBP4 ENSDARG00000024276 3194 1.522 - 0.767 - - - - - 0.755 - poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
92. CR388002.1 CR388002.1 1998 1.518 0.793 - - - - - 0.725 - -
93. aifm1 ENSDARG00000058088, ENSDARG00000117164 2038 1.518 - - - - - - 0.811 0.707 - apoptosis-inducing factor, mitochondrion-associated 1 [Source:ZFIN;Acc:ZDB-GENE-030826-11]
94. casq1b ENSDARG00000018105 2643 1.517 0.778 0.739 - - - - - - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
95. osbpl2a ENSDARG00000053804 1883 1.515 - 0.805 - - - - 0.710 - - oxysterol binding protein-like 2a [Source:ZFIN;Acc:ZDB-GENE-091116-46]
96. ndufa5 ENSDARG00000039346 2617 1.514 - - - - - 0.754 0.760 - - NADH:ubiquinone oxidoreductase subunit A5 [Source:ZFIN;Acc:ZDB-GENE-050320-17]
97. CU633479.5 ENSDARG00000114818 1815 1.514 0.776 0.738 - - - - - - -
98. obsl1b ENSDARG00000077388 2511 1.514 0.813 0.701 - - - - - - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
99. zgc:162780 ENSDARG00000069548 340 1.513 - - - - - 0.709 - 0.804 - zgc:162780 [Source:ZFIN;Acc:ZDB-GENE-070410-92]
100. zgc:92907 ENSDARG00000011026 986 1.512 - 0.755 - - - 0.757 - - - zgc:92907 [Source:ZFIN;Acc:ZDB-GENE-040718-161]

There are 1513 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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