Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mrpl54

Gene Name Gene ID Reads Annotation
mrpl54 ENSDARG00000071468 2715 mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]










Genes with expression patterns similar to mrpl54

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mrpl54 ENSDARG00000071468 2715 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
2. dap3 ENSDARG00000078500 2724 2.401 0.723 0.905 - - - 0.773 - - - death associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-051129-2]
3. mrpl36 ENSDARG00000070607 4069 2.382 0.732 - - - 0.805 - 0.845 - - mitochondrial ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-060503-821]
4. lrpprc ENSDARG00000043970 3847 2.377 - - - - - 0.813 0.791 0.773 - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
5. mrps6 ENSDARG00000039543 1892 2.326 0.749 - - - - 0.784 0.793 - - mitochondrial ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-060825-59]
6. zgc:193541 ENSDARG00000092873 21276 2.275 0.717 - - - - 0.752 0.806 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
7. limch1a ENSDARG00000074275 2981 2.26 0.745 - - - 0.775 - 0.740 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
8. ddx27 ENSDARG00000091831 1471 2.208 0.719 - - - 0.761 - 0.728 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
9. ndufs6 ENSDARG00000056583 7220 2.199 0.705 - 0.710 - - - 0.784 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
10. cnbpa ENSDARG00000045776 8648 1.829 0.887 0.942 - - - - - - - CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
11. dda1 ENSDARG00000076074, ENSDARG00000109308 1993 1.793 - 0.995 - - - - - 0.798 - DET1 and DDB1 associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2137]
12. NAT16 ENSDARG00000086222 4682 1.787 0.794 0.993 - - - - - - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
13. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 1.771 - 0.992 - - - - 0.779 - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
14. utp23 ENSDARG00000105012 1346 1.77 - 0.995 - - 0.775 - - - - UTP23, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-353]
15. CR387996.1 ENSDARG00000097774 3037 1.762 - 0.995 - - - 0.767 - - -
16. nr5a2 ENSDARG00000100940 1488 1.759 - 0.995 - - - - 0.764 - - nuclear receptor subfamily 5, group A, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-79]
17. cped1 ENSDARG00000045747 1024 1.743 - 0.994 - - 0.749 - - - - cadherin-like and PC-esterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-247]
18. sh3bp4a ENSDARG00000020000 1049 1.725 - 0.994 - - - - - 0.731 - SH3-domain binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-040303-3]
19. nhp2l1b nhp2l1b 3898 1.723 0.731 0.992 - - - - - - -
20. pgam5 ENSDARG00000035608 4044 1.721 0.726 0.995 - - - - - - - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
21. C1QBP ENSDARG00000039887 11186 1.72 0.867 - - - - - 0.853 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
22. METTL21C METTL21C 1717 1.713 0.722 0.991 - - - - - - -
23. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.702 - 0.992 - - 0.710 - - - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
24. ror2 ENSDARG00000076227, ENSDARG00000116710 1498 1.697 - 0.994 - - - - 0.703 - - receptor tyrosine kinase-like orphan receptor 2 [Source:ZFIN;Acc:ZDB-GENE-060427-5]
25. hars ENSDARG00000003693 7217 1.697 - 0.957 - - - - 0.740 - - histidyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040912-152]
26. rbb4 rbb4 15541 1.694 - 0.987 - - - - - 0.707 -
27. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.683 0.889 - - - - - 0.794 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
28. mrps9 ENSDARG00000061505 1636 1.678 - - - - - 0.764 0.914 - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
29. hccsa hccsa 869 1.675 0.770 - - - - - 0.905 - -
30. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 1.669 0.843 - - - - - 0.826 - - aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]
31. timm8b ENSDARG00000055708 7291 1.664 - - 0.778 - - - 0.886 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
32. kars ENSDARG00000103799 20937 1.659 0.769 0.890 - - - - - - - lysyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-021115-8]
33. pmp22b ENSDARG00000060457 20406 1.656 - 0.931 - - - - 0.725 - - peripheral myelin protein 22b [Source:ZFIN;Acc:ZDB-GENE-060421-4337]
34. atp5e 14858 1.655 - - - - - 0.820 0.835 - - ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
35. id2a ENSDARG00000055283 7428 1.647 - 0.943 - - - 0.704 - - - inhibitor of DNA binding 2a [Source:ZFIN;Acc:ZDB-GENE-020910-1]
36. fitm1 ENSDARG00000056464 1759 1.642 0.877 - - - - - 0.765 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
37. chchd4 chchd4 785 1.637 0.758 - - - - - 0.879 - -
38. exoc5 ENSDARG00000060323 2450 1.626 - - - - - 0.786 - 0.840 - exocyst complex component 5 [Source:ZFIN;Acc:ZDB-GENE-080204-126]
39. mdh2 ENSDARG00000043371 14485 1.621 0.743 - - - - - 0.878 - - malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
40. txlnbb ENSDARG00000076241 6396 1.617 0.854 - - - - - 0.763 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
41. me3 ENSDARG00000002305 3305 1.614 - - - - - - 0.797 0.817 - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
42. rpl7l1 ENSDARG00000042864 3256 1.608 0.824 - - - - - - 0.784 - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
43. mrps15 ENSDARG00000109289 3258 1.607 0.813 - - - - - 0.794 - - mitochondrial ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-040718-188]
44. tmem2 2572 1.602 - - - - - 0.766 - 0.836 - transmembrane protein 2, transcript variant X1
45. rwdd1 ENSDARG00000015930 2380 1.598 0.800 - - - - - 0.798 - - RWD domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-270]
46. alpk3a ENSDARG00000078989 1992 1.598 0.783 - - - - - 0.815 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
47. pdcd2l ENSDARG00000002754 417 1.598 - - - - - 0.726 0.872 - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
48. si:ch211-156j16.1 ENSDARG00000092035 7441 1.598 0.847 - - - - - 0.751 - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
49. BX294110.1 ENSDARG00000096875 1761 1.596 0.740 - - - - 0.856 - - -
50. PTGES3L PTGES3L 4801 1.596 0.838 - - - - - 0.758 - -
51. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.596 0.794 - - - - - 0.802 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
52. MRPL52 ENSDARG00000090568 4402 1.595 - - - - - - 0.844 0.751 - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
53. rrp1 ENSDARG00000103337 2366 1.589 0.735 - - - - - 0.854 - - ribosomal RNA processing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9837]
54. ndufs1 ENSDARG00000028546 5795 1.587 0.865 - - - - - 0.722 - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478]
55. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 1.584 0.745 - - - - - 0.839 - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
56. ptp4a3 ENSDARG00000039997 1964 1.581 0.825 - - - 0.756 - - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
57. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 1.58 - - - - - 0.734 0.846 - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
58. mrpl22 ENSDARG00000109961 1374 1.577 0.849 - - - - - 0.728 - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
59. myod1 ENSDARG00000030110 6019 1.576 0.860 - - - - - 0.716 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
60. col4a1 ENSDARG00000055009 3083 1.575 - - - - - 0.778 0.797 - - collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
61. rpl38 ENSDARG00000006413 59590 1.573 0.764 0.809 - - - - - - - ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
62. gypc ENSDARG00000041546 1487 1.57 0.806 - - - - - 0.764 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
63. tomm5 ENSDARG00000068265 11813 1.569 0.799 - - - 0.770 - - - - translocase of outer mitochondrial membrane 5 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040724-90]
64. chrna1 ENSDARG00000009021 2931 1.568 0.806 - - - - - 0.762 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
65. yme1l1a ENSDARG00000075192 2634 1.567 - - - - 0.764 - 0.803 - - YME1-like 1a [Source:ZFIN;Acc:ZDB-GENE-091113-41]
66. abcf2a ENSDARG00000038785 2065 1.567 - - - - 0.776 - 0.791 - - ATP-binding cassette, sub-family F (GCN20), member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8714]
67. flncb ENSDARG00000018820 5595 1.566 0.821 - - - - - 0.745 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
68. COA6 ENSDARG00000092677 1877 1.565 - - - - - 0.766 0.799 - - cytochrome c oxidase assembly factor 6 [Source:ZFIN;Acc:ZDB-GENE-070705-152]
69. sar1ab ENSDARG00000033320 3984 1.565 0.787 - - - - - 0.778 - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
70. tnnt2c ENSDARG00000032242 28801 1.564 0.720 - - - - - 0.844 - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
71. chrnd ENSDARG00000019342 2728 1.561 - - - - 0.816 - 0.745 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
72. efemp2a ENSDARG00000094324 39261 1.56 0.782 - - - - - 0.778 - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
73. phb ENSDARG00000057414 9551 1.559 0.770 - - - - - 0.789 - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
74. bscl2 ENSDARG00000037008 429 1.558 - - - - - 0.788 - 0.770 - Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:ZFIN;Acc:ZDB-GENE-051113-140]
75. asna1 ENSDARG00000018190 5253 1.555 - - - - - 0.810 - 0.745 - arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040625-120]
76. klhl41b ENSDARG00000006757 10762 1.555 0.843 - - - - - 0.712 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
77. atp5ib 19664 1.555 0.846 - - - - - 0.709 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Eb
78. txn2 ENSDARG00000034777 4071 1.55 0.725 - - - - - 0.825 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
79. TMPO TMPO 3264 1.544 0.829 - - - - - 0.715 - -
80. gstm gstm 4064 1.543 0.835 - - - - - - 0.708 -
81. CR354540.2 ENSDARG00000117517 18452 1.542 0.783 0.759 - - - - - - -
82. NFKBIB ENSDARG00000030087, ENSDARG00000109444 306 1.541 - - - - 0.771 - - 0.770 - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta [Source:ZFIN;Acc:ZDB-GENE-070705-529]
83. mrrf ENSDARG00000034174, ENSDARG00000115754 791 1.538 - - - - - - 0.745 0.793 - mitochondrial ribosome recycling factor [Source:ZFIN;Acc:ZDB-GENE-040704-12]
84. dnajc7_1 ENSDARG00000058148 687 1.537 - - - - - - 0.764 0.773 - DnaJ (Hsp40) homolog, subfamily C, member 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2483]
85. mgaa ENSDARG00000078784 1344 1.535 - - - - 0.765 - - 0.770 - MGA, MAX dimerization protein a [Source:ZFIN;Acc:ZDB-GENE-030603-1]
86. myoz2b ENSDARG00000037266 2139 1.535 - - - - 0.829 - 0.706 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
87. ctdsp1 ENSDARG00000040674 2828 1.532 - - - - 0.797 0.735 - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
88. bin1 bin1 3199 1.531 0.824 - - - - - 0.707 - -
89. etv1 ENSDARG00000101959 358 1.527 - - - - 0.754 - - 0.773 - ets variant 1 [Source:ZFIN;Acc:ZDB-GENE-070104-1]
90. NOP14 ENSDARG00000098859 1288 1.527 - - - - - 0.739 - 0.788 - NOP14 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9691]
91. cct3 ENSDARG00000016173 15869 1.527 0.736 - - - - - 0.791 - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
92. cox6a1 ENSDARG00000022438 18811 1.527 0.731 - - - - - 0.796 - - cytochrome c oxidase subunit 6A1 [Source:ZFIN;Acc:ZDB-GENE-030131-7715]
93. dchs1b ENSDARG00000079850 831 1.526 0.749 - - - 0.777 - - - - dachsous cadherin-related 1b [Source:ZFIN;Acc:ZDB-GENE-050208-41]
94. mrpl40 ENSDARG00000043554 2198 1.525 - - - - 0.759 - 0.766 - - mitochondrial ribosomal protein L40 [Source:ZFIN;Acc:ZDB-GENE-040912-37]
95. enpp1 ENSDARG00000005789 3267 1.524 0.808 - - - - - 0.716 - - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-172]
96. si:dkey-183n20.2 si:dkey-183n20.2 210 1.523 - - - - 0.758 0.765 - - -
97. hsp90aa1.2 ENSDARG00000024746 5210 1.522 - - - - 0.774 - 0.748 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-031001-3]
98. FP236812.4 FP236812.4 1244 1.52 - - - - 0.724 - 0.796 - -
99. ogfr ENSDARG00000037837 1001 1.52 - - - - 0.748 - - 0.772 - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
100. faua ENSDARG00000099022 82901 1.519 0.771 - - - - - 0.748 - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]

There are 1939 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA