Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mrpl43

Gene Name Gene ID Reads Annotation
mrpl43 ENSDARG00000076334 4045 mitochondrial ribosomal protein L43 [Source:ZFIN;Acc:ZDB-GENE-040718-125]










Genes with expression patterns similar to mrpl43

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mrpl43 ENSDARG00000076334 4045 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L43 [Source:ZFIN;Acc:ZDB-GENE-040718-125]
2. chchd3 chchd3 4139 2.343 0.865 0.744 - - - 0.734 - - -
3. apobec2a ENSDARG00000018881 4790 1.79 0.802 - - - - - 0.988 - - apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
4. CU457815.1 ENSDARG00000115823 1005 1.769 - - - - - 0.777 0.992 - - ankyrin repeat and SOCS box containing 15a [Source:NCBI gene;Acc:100151067]
5. edf1 ENSDARG00000009950 10518 1.75 - 0.753 - - - - 0.997 - - endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
6. SH3BGRL ENSDARG00000058302 4525 1.74 - - - - 0.751 - 0.989 - - SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
7. gys1 ENSDARG00000016875 2037 1.738 0.746 - - - - - 0.992 - - glycogen synthase 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1243]
8. eif3s6ip ENSDARG00000101082 18515 1.717 0.736 - - - - - 0.981 - - eukaryotic translation initiation factor 3, subunit 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2138]
9. ndufb4 ENSDARG00000019332, ENSDARG00000110786, ENSDARG00000113951 11340 1.715 - - - - - 0.725 0.990 - - NADH:ubiquinone oxidoreductase subunit B4 [Source:ZFIN;Acc:ZDB-GENE-040426-1973]
10. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 21205 1.702 - - - - 0.706 - 0.996 - - zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
11. cct5 ENSDARG00000045399 11572 1.697 0.710 - - - - - 0.987 - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
12. MATR3 MATR3 3962 1.644 - 0.838 - - 0.806 - - - -
13. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.598 0.840 - - - - 0.758 - - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
14. mrpl22 ENSDARG00000109961 1374 1.584 0.875 - - - - 0.709 - - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
15. txlnbb ENSDARG00000076241 6396 1.58 0.873 - - - - 0.707 - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
16. mibp2 ENSDARG00000101844 17444 1.566 0.808 - - - - 0.758 - - - muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]
17. BX248510.1 ENSDARG00000075422 1449 1.563 0.742 - - - - 0.821 - - - mitochondrial ribosomal protein L49 [Source:NCBI gene;Acc:558658]
18. flncb ENSDARG00000018820 5595 1.559 0.792 - - - - 0.767 - - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
19. gstm gstm 4064 1.551 0.823 0.728 - - - - - - -
20. dnajc1 ENSDARG00000001940 2848 1.55 - 0.797 - - - 0.753 - - - DnaJ (Hsp40) homolog, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-061103-529]
21. emid1 ENSDARG00000076119 862 1.546 - - - - 0.784 0.762 - - - EMI domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-40]
22. mrto4 ENSDARG00000007130 1086 1.542 0.726 - - - - 0.816 - - - MRT4 homolog, ribosome maturation factor [Source:ZFIN;Acc:ZDB-GENE-050417-142]
23. ndufv1 ENSDARG00000036438 8437 1.541 0.748 - - - - 0.793 - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:ZFIN;Acc:ZDB-GENE-040808-73]
24. AIMP1 ENSDARG00000060036 4136 1.539 0.789 - - - - 0.750 - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
25. nid1a ENSDARG00000068710 3948 1.539 0.720 - - - - 0.819 - - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
26. mrpl12 ENSDARG00000038768 5539 1.536 0.761 - - - - 0.775 - - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
27. CWC15 ENSDARG00000013382 8969 1.533 - 0.830 - - 0.703 - - - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
28. zgc:92518 ENSDARG00000016343 3837 1.53 0.745 - - - - 0.785 - - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
29. stip1 ENSDARG00000004906 7742 1.525 0.784 - - - - 0.741 - - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
30. syne2b ENSDARG00000053484 9225 1.525 0.702 0.823 - - - - - - - spectrin repeat containing, nuclear envelope 2b [Source:ZFIN;Acc:ZDB-GENE-071218-5]
31. FHOD3_1 FHOD3_1 983 1.524 0.721 - - - - 0.803 - - -
32. gps1 ENSDARG00000040650 3893 1.515 - 0.738 - - - 0.777 - - - G protein pathway suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-041111-240]
33. sucla2 ENSDARG00000005359 5992 1.515 0.794 0.721 - - - - - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
34. murca murca 6614 1.514 0.720 - - - - 0.794 - - -
35. smyd1b ENSDARG00000091253 4964 1.512 0.784 - - - - 0.728 - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
36. NRAP ENSDARG00000009341 3565 1.511 0.804 - - - - 0.707 - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
37. psmc3 ENSDARG00000007141 5592 1.505 0.707 0.798 - - - - - - - proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-666]
38. cyc1 ENSDARG00000038075 16699 1.5 0.754 - - - - 0.746 - - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
39. zgc:86709 ENSDARG00000110511, ENSDARG00000111417 22785 1.498 0.703 - - - - 0.795 - - - zgc:86709 [Source:ZFIN;Acc:ZDB-GENE-040625-35]
40. tmem223 ENSDARG00000069494 1528 1.498 0.714 - - - 0.784 - - - - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
41. mafa ENSDARG00000015890 2140 1.495 0.737 0.758 - - - - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
42. eif2d ENSDARG00000012929 2624 1.494 0.736 0.758 - - - - - - - eukaryotic translation initiation factor 2D [Source:ZFIN;Acc:ZDB-GENE-040426-1226]
43. rwdd1 ENSDARG00000015930 2380 1.492 0.738 - - - - 0.754 - - - RWD domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-270]
44. klhl41b ENSDARG00000006757 10762 1.49 0.782 - - - - 0.708 - - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
45. PTGES3L PTGES3L 4801 1.486 0.764 - - - - 0.722 - - -
46. hhatlb ENSDARG00000005139 6674 1.482 0.730 - - - - 0.752 - - - hedgehog acyltransferase like, b [Source:ZFIN;Acc:ZDB-GENE-050506-130]
47. DUSP26 ENSDARG00000103752 404 1.481 0.752 - - - - 0.729 - - - dual specificity phosphatase 26 [Source:HGNC Symbol;Acc:HGNC:28161]
48. smtnl1 ENSDARG00000041257 7410 1.481 0.747 - - - - 0.734 - - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
49. arvcfb ENSDARG00000061688 2388 1.473 0.713 - - - - 0.760 - - - ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
50. btg2 ENSDARG00000020298 6616 1.473 - 0.710 - - 0.763 - - - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
51. cilp ENSDARG00000053362 1429 1.473 - - - - - 0.756 - 0.717 - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
52. pdcd5 ENSDARG00000026072 3135 1.472 0.756 - - - - 0.716 - - - programmed cell death 5 [Source:ZFIN;Acc:ZDB-GENE-040426-980]
53. uqcrfs1_1 ENSDARG00000007745 2687 1.47 0.744 - - - - 0.726 - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
54. col11a1b ENSDARG00000009014 9998 1.463 - 0.701 - - - 0.762 - - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
55. cnbpa ENSDARG00000045776 8648 1.462 0.750 - - - - 0.712 - - - CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
56. myod1 ENSDARG00000030110 6019 1.462 0.742 - - - - 0.720 - - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
57. ptrfa ptrfa 4363 1.458 0.708 - - - - 0.750 - - -
58. METTL21C METTL21C 1717 1.458 0.710 - - - - 0.748 - - -
59. nop58 ENSDARG00000104353 8497 1.455 0.701 0.754 - - - - - - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
60. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 1.454 0.743 - - - - 0.711 - - - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
61. macf1 macf1 1862 1.448 0.709 - - - - 0.739 - - -
62. abcf2a ENSDARG00000038785 2065 1.44 - 0.717 - - - 0.723 - - - ATP-binding cassette, sub-family F (GCN20), member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8714]
63. tmem47 ENSDARG00000057322 4691 1.432 0.720 - - - - - - - 0.712 transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
64. reep1 ENSDARG00000014854 915 1.431 0.700 0.731 - - - - - - - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
65. si:ch1073-325m22.2 ENSDARG00000095921 8534 1.43 - 0.719 - - - 0.711 - - - si:ch1073-325m22.2 [Source:NCBI gene;Acc:100333135]
66. nnt ENSDARG00000023536 7357 1.424 - 0.710 - - - 0.714 - - - nicotinamide nucleotide transhydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2592]
67. sulf1 ENSDARG00000038428 2748 1.424 0.720 - - - - 0.704 - - - sulfatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9242]
68. sept9a ENSDARG00000020235 6881 0.997 - - - - - - 0.997 - - septin 9a [Source:ZFIN;Acc:ZDB-GENE-030131-9187]
69. dtnba ENSDARG00000077694 5483 0.996 - - - - - - 0.996 - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
70. pfkma ENSDARG00000014179 1293 0.992 - - - - - - 0.992 - - phosphofructokinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-040912-135]
71. timm13 ENSDARG00000058297 4447 0.992 - - - - - - 0.992 - - translocase of inner mitochondrial membrane 13 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-167]
72. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 0.992 - - - - - - 0.992 - - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
73. GPANK1 ENSDARG00000053995 1535 0.992 - - - - - - 0.992 - - G patch domain and ankyrin repeats 1 [Source:ZFIN;Acc:ZDB-GENE-070928-32]
74. igfbp1a ENSDARG00000099351 1717 0.992 - - - - - - 0.992 - - insulin-like growth factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-021231-1]
75. CAMK2G CAMK2G 3537 0.992 - - - - - - 0.992 - -
76. echdc2 ENSDARG00000016607 719 0.991 - - - - - - 0.991 - - enoyl CoA hydratase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030219-147]
77. hoxb3a ENSDARG00000029263 5493 0.991 - - - - - - 0.991 - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
78. dkk2 ENSDARG00000076420 553 0.991 - - - - - - 0.991 - - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
79. cd276 ENSDARG00000003061 2798 0.991 - - - - - - 0.991 - - CD276 molecule [Source:ZFIN;Acc:ZDB-GENE-070112-452]
80. xpo4 ENSDARG00000010281, ENSDARG00000109463 2010 0.991 - - - - - - 0.991 - - exportin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3062]
81. mapk6 ENSDARG00000032103 6422 0.991 - - - - - - 0.991 - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
82. etv5a ENSDARG00000069763, ENSDARG00000112509, ENSDARG00000113729 1954 0.991 - - - - - - 0.991 - - ets variant 5a [Source:ZFIN;Acc:ZDB-GENE-030131-9572]
83. cux2b ENSDARG00000086345 519 0.991 - - - - - - 0.991 - - cut-like homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-081104-176]
84. mfhas1 ENSDARG00000079104, ENSDARG00000115162 921 0.991 - - - - - - 0.991 - - malignant fibrous histiocytoma amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-080917-20]
85. fbl ENSDARG00000053912 5891 0.991 - - - - - - 0.991 - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
86. vipr2 ENSDARG00000012353, ENSDARG00000111580, ENSDARG00000115849 485 0.991 - - - - - - 0.991 - - vasoactive intestinal peptide receptor 2 [Source:ZFIN;Acc:ZDB-GENE-010406-4]
87. elmo1 ENSDARG00000098753 6966 0.991 - - - - - - 0.991 - - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
88. ZNF462 ENSDARG00000112909 1132 0.991 - - - - - - 0.991 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
89. dnajc8 ENSDARG00000059373 1858 0.991 - - - - - - 0.991 - - DnaJ (Hsp40) homolog, subfamily C, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-66]
90. kif5aa ENSDARG00000098936 2428 0.991 - - - - - - 0.991 - - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
91. rbms1a ENSDARG00000074023 2742 0.991 - - - - - - 0.991 - - RNA binding motif, single stranded interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4967]
92. med6 ENSDARG00000034734 2711 0.991 - - - - - - 0.991 - - mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
93. ARHGAP35 2409 0.991 - - - - - - 0.991 - - Rho GTPase activating protein 35b, transcript variant X2
94. adssl ENSDARG00000012399 2271 0.991 - - - - - - 0.991 - - adenylosuccinate synthase, like [Source:ZFIN;Acc:ZDB-GENE-020419-28]
95. USP31 ENSDARG00000074017 628 0.991 - - - - - - 0.991 - - ubiquitin specific peptidase 31 [Source:ZFIN;Acc:ZDB-GENE-100210-4]
96. CABZ01075242.1_1 ENSDARG00000114227 1012 0.991 - - - - - - 0.991 - -
97. SLC29A4 ENSDARG00000059690 470 0.991 - - - - - - 0.991 - - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
98. TUBB8P7 TUBB8P7 1353 0.991 - - - - - - 0.991 - -
99. CR388132.2 ENSDARG00000104041 640 0.991 - - - - - - 0.991 - -
100. lgi2a ENSDARG00000111069 965 0.991 - - - - - - 0.991 - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]

There are 769 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA