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Results for mrpl40

Gene Name Gene ID Reads Annotation
mrpl40 ENSDARG00000043554 2198 mitochondrial ribosomal protein L40 [Source:ZFIN;Acc:ZDB-GENE-040912-37]










Genes with expression patterns similar to mrpl40

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mrpl40 ENSDARG00000043554 2198 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L40 [Source:ZFIN;Acc:ZDB-GENE-040912-37]
2. si:ch211-198b3.1 si:ch211-198b3.1 765 2.359 - - - - 0.870 0.740 0.749 - -
3. sra1 ENSDARG00000053619 2799 2.344 - - - - 0.751 0.799 - - 0.794 steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
4. KIAA0355 3250 2.316 - - - - 0.787 - 0.781 0.748 - KIAA0355 ortholog, transcript variant X1
5. ehd1b ENSDARG00000014793, ENSDARG00000110243, ENSDARG00000110919 2496 2.288 0.759 0.761 - - - - 0.768 - - EH-domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2069]
6. gstm gstm 4064 2.172 0.717 - - - - 0.716 0.739 - -
7. dchs1b ENSDARG00000079850 831 1.767 - - - - 0.920 0.847 - - - dachsous cadherin-related 1b [Source:ZFIN;Acc:ZDB-GENE-050208-41]
8. ptp4a3 ENSDARG00000039997 1964 1.753 - - - - 0.880 0.873 - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
9. im:7154842 im:7154842 434 1.684 - - - - 0.878 0.806 - - -
10. fzd7b ENSDARG00000027589 2562 1.679 - 0.710 - - - - - - 0.969 frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
11. PGAP3 ENSDARG00000057531, ENSDARG00000112574 2046 1.672 - - - - 0.847 0.825 - - - post-GPI attachment to proteins 3 [Source:ZFIN;Acc:ZDB-GENE-080204-27]
12. knop1 ENSDARG00000077721 2198 1.668 - - - - 0.857 0.811 - - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
13. pex12 ENSDARG00000035149 175 1.659 - 0.764 - - 0.895 - - - - peroxisomal biogenesis factor 12 [Source:ZFIN;Acc:ZDB-GENE-040426-929]
14. DTX4 ENSDARG00000076302 2642 1.64 - - - - 0.718 - - - 0.922 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
15. vgll4l ENSDARG00000068409, ENSDARG00000110132 844 1.636 - 0.760 - - 0.876 - - - - vestigial like 4 like [Source:ZFIN;Acc:ZDB-GENE-070112-1682]
16. pip5k1ab ENSDARG00000024642 1988 1.632 - 0.845 - - - 0.787 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
17. pak2b ENSDARG00000018476 4331 1.631 - 0.783 - - 0.848 - - - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
18. hsp90aa1.2 ENSDARG00000024746 5210 1.624 - - - - 0.818 - 0.806 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-031001-3]
19. acss2 ENSDARG00000037781, ENSDARG00000112371 3100 1.623 - 0.885 - - - - 0.738 - - acyl-CoA synthetase short chain family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-388]
20. dscc1 ENSDARG00000019907 720 1.62 - - - - 0.839 0.781 - - - DNA replication and sister chromatid cohesion 1 [Source:ZFIN;Acc:ZDB-GENE-040912-35]
21. ift46 ENSDARG00000011240 2499 1.619 - 0.838 - - - - 0.781 - - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
22. st5 ENSDARG00000037363, ENSDARG00000112276 1797 1.616 - 0.733 - - - 0.883 - - - suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
23. EEF1E1 ENSDARG00000071774 3806 1.613 - 0.796 - - - 0.817 - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
24. mrps30 ENSDARG00000104111 2900 1.613 - - - - 0.788 0.825 - - - mitochondrial ribosomal protein S30 [Source:ZFIN;Acc:ZDB-GENE-050809-4]
25. phrf1 ENSDARG00000075252 1982 1.613 - 0.759 - - - - - - 0.854 PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-030131-624]
26. polr3e ENSDARG00000037358 1864 1.61 - - - - 0.835 - 0.775 - - polymerase (RNA) III (DNA directed) polypeptide E [Source:ZFIN;Acc:ZDB-GENE-030131-8462]
27. pigt ENSDARG00000075842 210 1.609 - - - - 0.883 - 0.726 - - phosphatidylinositol glycan anchor biosynthesis, class T [Source:ZFIN;Acc:ZDB-GENE-090313-46]
28. psma4 ENSDARG00000045928 5112 1.603 - - - - 0.883 - 0.720 - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
29. PRC1 PRC1 583 1.602 - 0.720 - - 0.882 - - - -
30. tns1 tns1 5891 1.601 - 0.707 - - - 0.894 - - -
31. amotl2a ENSDARG00000061923 4713 1.601 - 0.720 - - 0.881 - - - - angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
32. VDR VDR 489 1.599 - 0.746 - - 0.853 - - - -
33. phax ENSDARG00000044298 2302 1.598 - 0.802 - - 0.796 - - - - phosphorylated adaptor for RNA export [Source:ZFIN;Acc:ZDB-GENE-040822-42]
34. si:ch211-120j21.1 si:ch211-120j21.1 638 1.597 - - - - 0.887 - 0.710 - -
35. rereb ENSDARG00000075670 136 1.595 - - - - 0.893 - 0.702 - - arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
36. prkacaa ENSDARG00000100349 2711 1.591 - 0.733 - - 0.858 - - - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a [Source:ZFIN;Acc:ZDB-GENE-050114-6]
37. usp44 ENSDARG00000089861 1532 1.589 - - - - 0.815 - 0.774 - - ubiquitin specific peptidase 44 [Source:ZFIN;Acc:ZDB-GENE-040426-774]
38. supt6h ENSDARG00000006524 3221 1.585 - 0.875 - - - - 0.710 - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
39. abcf2a ENSDARG00000038785 2065 1.585 - - - - 0.812 - 0.773 - - ATP-binding cassette, sub-family F (GCN20), member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8714]
40. nelfb ENSDARG00000035505 1337 1.584 - 0.744 - - 0.840 - - - - negative elongation factor complex member B [Source:ZFIN;Acc:ZDB-GENE-040426-765]
41. BX649282.1 ENSDARG00000105704 347 1.583 - - - - - 0.811 0.772 - -
42. fam13a ENSDARG00000075564 1905 1.582 - - - - 0.862 - 0.720 - - family with sequence similarity 13, member A [Source:ZFIN;Acc:ZDB-GENE-050208-102]
43. tspan5b ENSDARG00000070449 1056 1.579 - - - - 0.862 - - 0.717 - tetraspanin 5b [Source:ZFIN;Acc:ZDB-GENE-041212-12]
44. yme1l1a ENSDARG00000075192 2634 1.577 - - - - 0.860 - 0.717 - - YME1-like 1a [Source:ZFIN;Acc:ZDB-GENE-091113-41]
45. prrx1a ENSDARG00000033971 1786 1.575 - - - - 0.771 0.804 - - - paired related homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020905-5]
46. C2CD2 ENSDARG00000105000 2573 1.572 - - - - 0.821 0.751 - - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
47. FP236812.4 FP236812.4 1244 1.571 - 0.715 - - 0.856 - - - -
48. mrpl3 ENSDARG00000103318 2308 1.569 0.704 - - - - 0.865 - - - mitochondrial ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-8227]
49. casc4 ENSDARG00000074490 2019 1.565 - 0.778 - - 0.787 - - - - cancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]
50. me3 ENSDARG00000002305 3305 1.565 - - - - - 0.846 0.719 - - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
51. btbd9 ENSDARG00000068983 356 1.558 - - - - - 0.803 0.755 - - BTB (POZ) domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040704-39]
52. ppdpfb ENSDARG00000031317 12820 1.558 - - - - 0.819 - - - 0.739 pancreatic progenitor cell differentiation and proliferation factor b [Source:ZFIN;Acc:ZDB-GENE-030131-8247]
53. pa2g4b ENSDARG00000070657 7999 1.557 - 0.719 - - - - 0.838 - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
54. dbnla ENSDARG00000008170 2129 1.556 - - - - 0.809 0.747 - - - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
55. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1.555 - 0.704 - - 0.851 - - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
56. ZNF576 ZNF576 1447 1.554 - - - - 0.799 0.755 - - -
57. hs2st1a ENSDARG00000099478 864 1.553 - 0.806 - - - - 0.747 - - heparan sulfate 2-O-sulfotransferase 1a [Source:ZFIN;Acc:ZDB-GENE-070112-2312]
58. si:dkey-13i19.8 ENSDARG00000093058 4617 1.552 - 0.730 - - - 0.822 - - - si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
59. MRPL21 ENSDARG00000003846 3244 1.55 - 0.762 - - 0.788 - - - - mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]
60. si:ch211-85n16.3 ENSDARG00000096346 1095 1.546 - - - - - - 0.772 - 0.774 si:ch211-85n16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-137]
61. zfand5b ENSDARG00000002271 4145 1.544 - 0.700 - - - - - - 0.844 zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
62. nhp2l1b nhp2l1b 3898 1.544 - - - - - 0.750 0.794 - -
63. ppil2 ENSDARG00000002016, ENSDARG00000116167 914 1.543 - 0.775 - - - 0.768 - - - peptidylprolyl isomerase (cyclophilin)-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1096]
64. GABARAP GABARAP 8341 1.542 - 0.746 - - - - 0.796 - -
65. si:dkey-117n7.5 ENSDARG00000089640 452 1.541 - - - - - 0.799 0.742 - - si:dkey-117n7.5 [Source:ZFIN;Acc:ZDB-GENE-060503-331]
66. CABZ01080568.2 CABZ01080568.2 2137 1.538 - 0.747 - - 0.791 - - - -
67. patl1 ENSDARG00000017423 2744 1.536 - - - - 0.773 - 0.763 - - protein associated with topoisomerase II homolog 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-83]
68. exoc3l1 ENSDARG00000051899, ENSDARG00000113508, ENSDARG00000114148 195 1.536 - - - - - 0.758 0.778 - - exocyst complex component 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-36]
69. wu:fq41a10 wu:fq41a10 7009 1.535 - - - - 0.816 - - - 0.719
70. arl11 ENSDARG00000036637 707 1.535 - - - - 0.831 0.704 - - - ADP-ribosylation factor-like 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3410]
71. zgc:100918 ENSDARG00000087243 5451 1.534 - - - - - 0.716 - - 0.818 zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
72. rbm39b ENSDARG00000041853 1421 1.533 - 0.702 - - 0.831 - - - - RNA binding motif protein 39b [Source:ZFIN;Acc:ZDB-GENE-050327-97]
73. PTP4A3 ENSDARG00000039997 3814 1.533 - 0.744 - - - - 0.789 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
74. mrpl10 ENSDARG00000045091, ENSDARG00000112205 1187 1.526 - - - - - 0.801 0.725 - - mitochondrial ribosomal protein L10 [Source:ZFIN;Acc:ZDB-GENE-050320-19]
75. mrpl54 ENSDARG00000071468 2715 1.525 - - - - 0.759 - 0.766 - - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
76. slc38a5b ENSDARG00000014587 8461 1.522 - 0.773 - - - 0.749 - - - solute carrier family 38, member 5b [Source:ZFIN;Acc:ZDB-GENE-040718-395]
77. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.519 - 0.769 - - - - 0.750 - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
78. si:ch73-21k16.6 si:ch73-21k16.6 4896 1.516 - 0.720 - - - - 0.796 - -
79. ube2nb ENSDARG00000045877 4583 1.513 - 0.797 - - 0.716 - - - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
80. PHTF1 PHTF1 1029 1.513 - 0.748 - - - 0.765 - - -
81. mdh2 ENSDARG00000043371 14485 1.508 0.753 - - - - - 0.755 - - malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
82. sc:d0139 sc:d0139 233 1.507 - - - - - 0.763 - 0.744 -
83. mrpl48 ENSDARG00000035167 1008 1.504 - - - - - 0.778 0.726 - - mitochondrial ribosomal protein L48 [Source:ZFIN;Acc:ZDB-GENE-041008-125]
84. plecb ENSDARG00000021987 13621 1.502 0.729 0.773 - - - - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
85. smurf2 ENSDARG00000038067 2057 1.501 - 0.705 - - - 0.796 - - - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
86. samm50l ENSDARG00000039681 2465 1.501 - - - - - 0.766 0.735 - - sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
87. ck2b ck2b 781 1.501 - 0.735 - - - 0.766 - - -
88. fam174b ENSDARG00000068709 1171 1.499 - 0.713 - - - - 0.786 - - family with sequence similarity 174, member B [Source:ZFIN;Acc:ZDB-GENE-050419-78]
89. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.498 0.714 - - - - - 0.784 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
90. arvcfb ENSDARG00000061688 2388 1.496 - 0.763 - - - - 0.733 - - ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
91. timm8b ENSDARG00000055708 7291 1.495 - 0.759 - - - - 0.736 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
92. iars ENSDARG00000007955 1363 1.494 0.739 - - - - - 0.755 - - isoleucyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-6325]
93. anp32e ENSDARG00000054804 11017 1.494 - 0.751 - - - - 0.743 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
94. bmpr2a ENSDARG00000011941 2972 1.494 - - - - 0.725 - 0.769 - - bone morphogenetic protein receptor, type II a (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-1]
95. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.492 - - - - 0.702 0.790 - - - heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
96. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.483 - 0.749 - - - - 0.734 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
97. sf3a3 ENSDARG00000100114 4511 1.481 - - - - - 0.718 0.763 - - splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
98. eef2k ENSDARG00000035835 2906 1.48 - 0.777 - - - 0.703 - - - eukaryotic elongation factor 2 kinase [Source:ZFIN;Acc:ZDB-GENE-020916-2]
99. cd248b ENSDARG00000077938 2561 1.479 - 0.769 - - - - 0.710 - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
100. psmd8 ENSDARG00000020454 6645 1.479 - - - - - 0.717 0.762 - - proteasome 26S subunit, non-ATPase 8 [Source:ZFIN;Acc:ZDB-GENE-040625-136]

There are 1637 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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