Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mrpl38

Gene Name Gene ID Reads Annotation
mrpl38 ENSDARG00000039667 1145 mitochondrial ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-040426-2373]










Genes with expression patterns similar to mrpl38

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mrpl38 ENSDARG00000039667 1145 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-040426-2373]
2. rp42-pen rp42-pen 3395 2.982 0.719 0.836 - - - 0.709 0.718 - -
3. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 2.356 - 0.861 - - - 0.713 0.782 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
4. chrna1 ENSDARG00000009021 2931 2.33 - 0.818 - - - 0.726 0.786 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
5. ddx49 ENSDARG00000012899 1604 2.27 0.792 0.718 - - - - 0.760 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
6. desi2 ENSDARG00000004460 1593 2.264 - 0.782 - - - 0.712 0.770 - - desumoylating isopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-39]
7. col4a2 ENSDARG00000104110 947 2.255 - 0.785 - - - 0.728 0.742 - - collagen, type IV, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070725-3]
8. rbm25 rbm25 3629 2.252 0.811 0.720 - - - - 0.721 - -
9. CR847973.1 ENSDARG00000115516 8754 2.229 - 0.706 - - - 0.762 0.761 - -
10. iars2 ENSDARG00000044134 1990 2.209 - 0.706 - - - 0.741 0.762 - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-608]
11. tnnt2d ENSDARG00000002988 7590 2.186 - 0.739 - - - 0.715 0.732 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
12. tomm40l ENSDARG00000036721 1714 1.787 - 0.963 - - - - 0.824 - - translocase of outer mitochondrial membrane 40 homolog, like [Source:ZFIN;Acc:ZDB-GENE-040426-2319]
13. mrps18b ENSDARG00000007065 2121 1.67 - 0.842 - - - - 0.828 - - mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
14. hibadhb ENSDARG00000007959 4858 1.668 - - - - - 0.788 0.880 - - 3-hydroxyisobutyrate dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-1582]
15. cct8 ENSDARG00000008243 6843 1.66 - 0.864 - - - - 0.796 - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
16. dnajc15 ENSDARG00000038309 1274 1.637 - 0.825 - - - - 0.812 - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
17. ppp1r14bb ENSDARG00000030161 2349 1.636 0.862 - - - - 0.774 - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Bb [Source:ZFIN;Acc:ZDB-GENE-030616-595]
18. dyrk2 ENSDARG00000094646 2163 1.635 - 0.841 - - - - 0.794 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
19. C25H12orf73 C25H12orf73 2031 1.633 0.800 - - - - - 0.833 - -
20. supt16h ENSDARG00000079949 4755 1.632 0.812 0.820 - - - - - - - SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
21. slc16a3 ENSDARG00000045051 818 1.625 - - - - - 0.767 0.858 - - solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
22. srpk3 ENSDARG00000005916 1546 1.622 - 0.773 - - - - 0.849 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
23. hapln1a ENSDARG00000089769 12334 1.62 - 0.869 - - - - 0.751 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
24. trim55b ENSDARG00000058158 586 1.618 0.837 0.781 - - - - - - - tripartite motif containing 55b [Source:ZFIN;Acc:ZDB-GENE-060312-37]
25. nid1a ENSDARG00000068710 3948 1.615 - - - - - 0.854 0.761 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
26. mrps2 ENSDARG00000103198 2410 1.615 - 0.735 - - - - 0.880 - - mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
27. ndufa5 ENSDARG00000039346 2617 1.613 - 0.811 - - - - 0.802 - - NADH:ubiquinone oxidoreductase subunit A5 [Source:ZFIN;Acc:ZDB-GENE-050320-17]
28. MYOT ENSDARG00000076312 1791 1.611 - 0.856 - - - - 0.755 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
29. kpnb3 ENSDARG00000040245 7967 1.606 0.858 - - - - - 0.748 - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
30. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 1.601 - 0.830 - - - - 0.771 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
31. mybphb ENSDARG00000003081 5208 1.599 - 0.823 - - - - 0.776 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
32. fitm1 ENSDARG00000056464 1759 1.597 - 0.785 - - - - 0.812 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
33. hipk3b ENSDARG00000062082 1248 1.596 - - - - - 0.774 0.822 - - homeodomain interacting protein kinase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-82]
34. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.595 - 0.813 - - - - 0.782 - -
35. LENG8 ENSDARG00000076805, ENSDARG00000113326 4021 1.594 0.868 - - - - - 0.726 - - leukocyte receptor cluster (LRC) member 8 [Source:ZFIN;Acc:ZDB-GENE-070410-6]
36. klhl21 ENSDARG00000039255 2550 1.594 - 0.741 - - - - 0.853 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
37. hsd17b10 ENSDARG00000017781 1793 1.593 - 0.763 - - - - 0.830 - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
38. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.592 - 0.870 - - - - 0.722 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
39. wu:fb17g07 wu:fb17g07 10567 1.591 - 0.835 - - - - 0.756 - -
40. hspg2 ENSDARG00000076564 3440 1.586 - 0.794 - - - - 0.792 - - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
41. apex1 ENSDARG00000045843 6345 1.586 - 0.811 - - - - 0.775 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
42. C13H10orf71 3489 1.584 - 0.825 - - - - 0.759 - - chromosome 13 C10orf71 homolog
43. PHB2 PHB2 3755 1.582 - 0.784 - - - - 0.798 - -
44. timm9 ENSDARG00000043865 2456 1.582 - 0.833 - - - - 0.749 - - translocase of inner mitochondrial membrane 9 homolog [Source:ZFIN;Acc:ZDB-GENE-021206-14]
45. chchd4 chchd4 785 1.582 - 0.844 - - - 0.738 - - -
46. alpk3a ENSDARG00000078989 1992 1.58 - 0.823 - - - - 0.757 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
47. ck2b ck2b 781 1.58 0.809 - - - - - 0.771 - -
48. arpp21 ENSDARG00000061081 892 1.579 - 0.815 - - - - 0.764 - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
49. hmgb3b ENSDARG00000006408 3442 1.578 - 0.781 - - - - 0.797 - - high mobility group box 3b [Source:ZFIN;Acc:ZDB-GENE-050417-290]
50. mrpl44 ENSDARG00000094277 1778 1.578 - 0.862 - - - - 0.716 - - mitochondrial ribosomal protein L44 [Source:ZFIN;Acc:ZDB-GENE-050913-59]
51. timm8b ENSDARG00000055708 7291 1.578 - 0.745 - - - - 0.833 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
52. nt5dc3 ENSDARG00000062949 816 1.578 - 0.863 - - - 0.715 - - - 5'-nucleotidase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-080523-3]
53. MYOM3 2720 1.576 - 0.820 - - - - 0.756 - - myomesin 3, transcript variant X2
54. nmrk2 ENSDARG00000067848 10293 1.576 - 0.781 - - - - 0.795 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
55. flrt3 ENSDARG00000076895 3516 1.575 - 0.804 - - - - 0.771 - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
56. farsb ENSDARG00000016864 6776 1.575 - - - - - 0.728 0.847 - - phenylalanyl-tRNA synthetase subunit beta [Source:ZFIN;Acc:ZDB-GENE-021206-2]
57. clasrp ENSDARG00000061742, ENSDARG00000116329 1650 1.574 0.754 0.820 - - - - - - - CLK4-associating serine/arginine rich protein [Source:ZFIN;Acc:ZDB-GENE-060503-837]
58. TMPO TMPO 3264 1.574 - 0.758 - - - - 0.816 - -
59. uqcrc2a ENSDARG00000014794 3949 1.574 - 0.752 - - - - 0.822 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
60. lrrfip1a ENSDARG00000030012 1263 1.573 - 0.857 - - - - 0.716 - - leucine rich repeat (in FLII) interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-99]
61. rcbtb2 ENSDARG00000090687 1658 1.572 - 0.709 - - - - 0.863 - - regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-071016-3]
62. mef2d ENSDARG00000040237 6144 1.572 - 0.790 - - - - 0.782 - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
63. ntmt1 ENSDARG00000022399 5779 1.572 - 0.828 - - - - 0.744 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
64. mrps15 ENSDARG00000109289 3258 1.571 - 0.792 - - - - 0.779 - - mitochondrial ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-040718-188]
65. tnnt2e ENSDARG00000045822, ENSDARG00000109924 3288 1.567 - - - - - 0.764 0.803 - - troponin T2e, cardiac [Source:ZFIN;Acc:ZDB-GENE-041210-27]
66. mef2aa ENSDARG00000031756 2699 1.567 - 0.802 - - - - 0.765 - - myocyte enhancer factor 2aa [Source:ZFIN;Acc:ZDB-GENE-990415-163]
67. cfl2 ENSDARG00000014106 8051 1.567 - 0.837 - - - - 0.730 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
68. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 1.567 - 0.822 - - - - 0.745 - - RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
69. pcmt ENSDARG00000015201 5132 1.564 - 0.776 - - - - 0.788 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
70. rpl7a ENSDARG00000019230 1204 1.564 - 0.787 - - - 0.777 - - - ribosomal protein L7a [Source:ZFIN;Acc:ZDB-GENE-031001-9]
71. me3 ENSDARG00000002305 3305 1.564 0.849 - - - - - 0.715 - - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
72. mrpl37 ENSDARG00000062916 1600 1.564 - 0.721 - - - - 0.843 - - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
73. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.562 - 0.760 - - - - 0.802 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
74. ITGB1BP2 ENSDARG00000030176 2472 1.562 - 0.779 - - - - 0.783 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
75. klhl40a ENSDARG00000039052 2537 1.561 - 0.792 - - - - 0.769 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
76. cacng1 cacng1 3118 1.56 - 0.811 - - - 0.749 - - -
77. BX294434.1 ENSDARG00000061272 6493 1.56 - 0.820 - - - - 0.740 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
78. pygmb ENSDARG00000013317 5454 1.56 - 0.718 - - - - 0.842 - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
79. six1b ENSDARG00000026473 1908 1.557 - 0.833 - - - - 0.724 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
80. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.557 - 0.754 - - - - 0.803 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
81. rab5if ENSDARG00000074790 8807 1.557 - 0.750 - - - - 0.807 - - RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
82. srl ENSDARG00000104587 11126 1.557 - 0.795 - - - - 0.762 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
83. pbxip1a ENSDARG00000071015 4960 1.555 - 0.798 - - - - 0.757 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
84. mrps9 ENSDARG00000061505 1636 1.555 - 0.818 - - - - 0.737 - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
85. tns1 tns1 5891 1.554 - 0.808 - - - - 0.746 - -
86. limch1a ENSDARG00000074275 2981 1.553 - 0.753 - - - - 0.800 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
87. TMTC2 TMTC2 478 1.552 0.831 - - - - - 0.721 - -
88. bcl2l13 ENSDARG00000062370, ENSDARG00000111116 3206 1.55 - - - - - 0.714 0.836 - - BCL2 like 13 [Source:ZFIN;Acc:ZDB-GENE-050419-215]
89. mrps6 ENSDARG00000039543 1892 1.549 - - - - - 0.734 0.815 - - mitochondrial ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-060825-59]
90. pomp ENSDARG00000032296 4439 1.548 - 0.803 - - - - 0.745 - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
91. si:ch211-156j22.4 ENSDARG00000094977 4350 1.547 - 0.832 - - - - 0.715 - - si:ch211-156j22.4 [Source:ZFIN;Acc:ZDB-GENE-030131-1968]
92. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.547 - 0.816 - - - - 0.731 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
93. COL22A1 COL22A1 4473 1.546 - 0.792 - - - - 0.754 - -
94. cacna1sa ENSDARG00000029457 883 1.546 - - - - - 0.746 0.800 - - calcium channel, voltage-dependent, L type, alpha 1S subunit, a [Source:ZFIN;Acc:ZDB-GENE-090514-1]
95. eif3m ENSDARG00000013931 8117 1.544 - 0.819 - - - - 0.725 - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
96. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 1.542 - - - - - 0.721 0.821 - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
97. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 1.54 - - - - - 0.756 0.784 - - NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
98. st5 ENSDARG00000037363, ENSDARG00000112276 1797 1.54 - 0.790 - - - - 0.750 - - suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
99. prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 1.539 0.739 - - - - - 0.800 - - peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
100. ryr1b ENSDARG00000023797 5693 1.539 - 0.795 - - - - 0.744 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]

There are 1485 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA