Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mrpl3

Gene Name Gene ID Reads Annotation
mrpl3 ENSDARG00000103318 2308 mitochondrial ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-8227]










Genes with expression patterns similar to mrpl3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mrpl3 ENSDARG00000103318 2308 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-8227]
2. samm50l ENSDARG00000039681 2465 2.514 - - - - - 0.756 0.868 - 0.890 sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
3. TRIP10 TRIP10 1079 2.438 - - 0.796 - - 0.749 - - 0.893
4. SCARF2 1117 2.36 0.729 - 0.813 - - 0.818 - - - scavenger receptor class F, member 2
5. ppp1r12a ENSDARG00000010784 4333 2.184 - - - - - 0.739 - 0.724 0.721 protein phosphatase 1, regulatory subunit 12A [Source:ZFIN;Acc:ZDB-GENE-041011-3]
6. derl1 ENSDARG00000021905 4698 1.803 - - - - - - 0.893 - 0.910 derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
7. gid8b ENSDARG00000037589 2121 1.763 - - - - - 0.838 - - 0.925 GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
8. rbm34 ENSDARG00000101877 1573 1.755 - - - - - 0.846 - - 0.909 RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
9. ik ENSDARG00000004161 3132 1.692 - - - - - 0.772 - - 0.920 IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
10. mapk7 ENSDARG00000023110 455 1.685 - - - - - - 0.783 - 0.902 mitogen-activated protein kinase 7 [Source:ZFIN;Acc:ZDB-GENE-050320-10]
11. lysmd3 ENSDARG00000024693 754 1.685 - - 0.805 - - - - - 0.880 LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
12. pcnxl3 pcnxl3 756 1.665 - - - - - - 0.787 - 0.878
13. psmc3 ENSDARG00000007141 5592 1.664 - 0.771 - - - - - - 0.893 proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-666]
14. pvrl1b 1645 1.662 - - - - - 0.784 - - 0.878 poliovirus receptor-related 1b
15. ndst2b ENSDARG00000060678 453 1.66 - - 0.784 - - - - - 0.876 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
16. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.645 - - - - - 0.849 - - 0.796 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
17. ngly1 ENSDARG00000003205 733 1.641 - - - - - 0.750 - - 0.891 N-glycanase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-535]
18. taz ENSDARG00000041421 985 1.637 - - - - - 0.738 - - 0.899 tafazzin [Source:ZFIN;Acc:ZDB-GENE-030131-684]
19. pex13 ENSDARG00000071037 738 1.636 - - - - - 0.804 - - 0.832 peroxisomal biogenesis factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1544]
20. rnf121 ENSDARG00000060282 1809 1.635 - - - - - - 0.740 - 0.895 ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
21. ZNF518B 475 1.631 - - - - - - - 0.743 0.888 zinc finger protein 518B
22. daxx ENSDARG00000000729 734 1.631 0.759 - - - - - - - 0.872 death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
23. rwdd ENSDARG00000068256 964 1.631 - - - - - 0.748 - - 0.883 RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
24. psmb6 ENSDARG00000002240 8015 1.63 - 0.809 - - - 0.821 - - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
25. wdr26b ENSDARG00000006812 2216 1.628 - - 0.771 - - - - - 0.857 WD repeat domain 26b [Source:ZFIN;Acc:ZDB-GENE-041014-277]
26. rhoj ENSDARG00000020250 1522 1.625 0.708 - - - - - - - 0.917 ras homolog family member J [Source:ZFIN;Acc:ZDB-GENE-040724-272]
27. ccdc82 ENSDARG00000014966 563 1.622 0.742 - - - - - - - 0.880 coiled-coil domain containing 82 [Source:ZFIN;Acc:ZDB-GENE-030131-5749]
28. pabpn1 ENSDARG00000045373 4876 1.62 - 0.724 - - - - - - 0.896 poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
29. acaa2 ENSDARG00000038881 2649 1.616 - - - - - - 0.789 - 0.827 acetyl-CoA acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1996]
30. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.616 - - - - - 0.785 - - 0.831 small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
31. srek1ip1 ENSDARG00000043728 985 1.614 - - - - - 0.729 - - 0.885 SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
32. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 1.604 - - - - - 0.777 - 0.827 - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
33. b4galt6 ENSDARG00000010301 2005 1.603 - - - - - - 0.756 - 0.847 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-789]
34. gpr143 ENSDARG00000034572 559 1.593 - - - - - 0.707 - - 0.886 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
35. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.593 - - 0.732 - - - - - 0.861 euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
36. nkap ENSDARG00000033450, ENSDARG00000116152 1929 1.592 - - 0.731 - - 0.861 - - - NFKB activating protein [Source:ZFIN;Acc:ZDB-GENE-030131-8064]
37. smc1al ENSDARG00000058203 8838 1.588 - 0.779 - - - - 0.809 - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
38. dhrs13a.2 ENSDARG00000111240 491 1.588 - - - - - 0.727 - - 0.861 dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
39. igf2bp2a ENSDARG00000003421 2810 1.588 - - - - - - 0.738 - 0.850 insulin-like growth factor 2 mRNA binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-44]
40. snrnp27 ENSDARG00000035625 9080 1.587 - - 0.865 - - 0.722 - - - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
41. polr2gl ENSDARG00000056127 1771 1.583 - - 0.761 - - - - - 0.822 polymerase (RNA) II (DNA directed) polypeptide G-like [Source:ZFIN;Acc:ZDB-GENE-030131-2808]
42. mef2d ENSDARG00000040237 6144 1.581 0.835 - - - - - - 0.746 - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
43. slc25a14 ENSDARG00000026680, ENSDARG00000113197 2387 1.579 0.744 - - - - 0.835 - - - solute carrier family 25 (mitochondrial carrier, brain), member 14 [Source:ZFIN;Acc:ZDB-GENE-040426-749]
44. FBXL3 FBXL3 1769 1.577 - - - - - - 0.741 - 0.836
45. F8A3 F8A3 646 1.575 - - 0.789 - - - - 0.786 -
46. MZT1 ENSDARG00000096668 2514 1.573 - - - - - - 0.776 - 0.797 mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]
47. lin52 ENSDARG00000070833 2271 1.573 - - - - - 0.780 - 0.793 - lin-52 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-061110-82]
48. CASK CASK 1750 1.572 - - 0.778 - - - - - 0.794
49. abhd17c ENSDARG00000058452, ENSDARG00000111161 1698 1.572 - - - - - 0.732 - - 0.840 abhydrolase domain containing 17C [Source:ZFIN;Acc:ZDB-GENE-040426-714]
50. sypl2a ENSDARG00000055307, ENSDARG00000115972 7103 1.569 - - - - - 0.862 0.707 - - synaptophysin-like 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1434]
51. mrpl40 ENSDARG00000043554 2198 1.569 0.704 - - - - 0.865 - - - mitochondrial ribosomal protein L40 [Source:ZFIN;Acc:ZDB-GENE-040912-37]
52. wif1 ENSDARG00000005541 1689 1.568 - - 0.721 - - - - - 0.847 wnt inhibitory factor 1 [Source:ZFIN;Acc:ZDB-GENE-990712-17]
53. ZNF337_25 ZNF337_25 1713 1.568 - - 0.806 - - - - 0.762 -
54. nod2 ENSDARG00000010756 294 1.565 - - - - - 0.703 - - 0.862 nucleotide-binding oligomerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061108-4]
55. ccnf ENSDARG00000105046 1790 1.555 - - - - - - 0.710 0.845 - cyclin F [Source:ZFIN;Acc:ZDB-GENE-021030-2]
56. eif4a1b ENSDARG00000003032, ENSDARG00000116907 14301 1.551 0.712 - - - - - - - 0.839 eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
57. C3H16orf58 C3H16orf58 487 1.548 - - 0.782 - - 0.766 - - -
58. polr1d ENSDARG00000037570 860 1.548 - - 0.704 - - - - - 0.844 RNA polymerase I and III subunit D [Source:ZFIN;Acc:ZDB-GENE-040930-4]
59. csde1_1 ENSDARG00000074758 2759 1.542 - - - - - 0.818 0.724 - - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
60. kif15 ENSDARG00000012073 1936 1.542 - - - - - - 0.705 - 0.837 kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
61. mcrs1 ENSDARG00000020840 3232 1.54 - - - - - - - 0.714 0.826 microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
62. AKT3 AKT3 1729 1.539 - - - - - - - 0.755 0.784
63. brd3a ENSDARG00000006527 1636 1.538 - - - - - - 0.749 - 0.789 bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
64. tom1 ENSDARG00000104581 1457 1.537 - - - - - 0.715 - - 0.822 target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
65. pdcd11 ENSDARG00000052480 2791 1.534 0.710 - - - - - - - 0.824 programmed cell death 11 [Source:ZFIN;Acc:ZDB-GENE-030131-4076]
66. CABZ01067945.1 CABZ01067945.1 469 1.533 - - - - - 0.744 - 0.789 -
67. dazap2 ENSDARG00000007867 1805 1.533 - - - - - - 0.743 - 0.790 DAZ associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3036]
68. hectd1 ENSDARG00000054213 3501 1.53 - 0.769 - - - 0.761 - - - HECT domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030616-153]
69. arhgap29b ENSDARG00000017748 812 1.527 - - 0.797 - - 0.730 - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
70. uba3 ENSDARG00000057987, ENSDARG00000116639 1181 1.525 - - 0.764 - - 0.761 - - - ubiquitin-like modifier activating enzyme 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2825]
71. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.525 - - - - - 0.723 - - 0.802 heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
72. gdap1l1 ENSDARG00000028628 233 1.522 - - - - - 0.719 - 0.803 - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
73. zmynd11 ENSDARG00000057249, ENSDARG00000114501 2067 1.522 - 0.759 - - - - 0.763 - - zinc finger, MYND-type containing 11 [Source:ZFIN;Acc:ZDB-GENE-050522-301]
74. srebf1 ENSDARG00000067607 1537 1.522 - - - - - - 0.724 - 0.798 sterol regulatory element binding transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-090812-3]
75. aurkaip1 ENSDARG00000074985 2214 1.52 - 0.772 0.748 - - - - - - aurora kinase A interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-24]
76. MIB1 ENSDARG00000102184 3285 1.513 - - - - - - - 0.705 0.808 mindbomb E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-030404-2]
77. acin1b ENSDARG00000026842 3806 1.513 - - 0.752 - - - 0.761 - - apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
78. nhp2l1b nhp2l1b 3898 1.513 - - - - - 0.780 0.733 - -
79. map7d1b ENSDARG00000104701 1655 1.506 - - 0.730 - - - - 0.776 - MAP7 domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080215-23]
80. CABZ01003826.1_1 CABZ01003826.1_1 1154 1.505 - - 0.769 - - 0.736 - - -
81. nup88 ENSDARG00000003235, ENSDARG00000111135 1114 1.504 - - 0.790 - - 0.714 - - - nucleoporin 88 [Source:ZFIN;Acc:ZDB-GENE-050522-297]
82. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 1.502 - - - - - 0.779 0.723 - - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
83. plcg1 ENSDARG00000038442 5324 1.496 - 0.724 0.772 - - - - - - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
84. arfgef2 ENSDARG00000074702 1593 1.494 - - - - - - 0.748 0.746 - ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-090312-50]
85. si:dkey-19e4.5 ENSDARG00000089886 2562 1.49 - - - - - - 0.742 - 0.748 si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
86. herc2 ENSDARG00000073841 486 1.486 0.704 - 0.782 - - - - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070718-6]
87. usp2a ENSDARG00000020107 2586 1.485 0.765 - 0.720 - - - - - - ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
88. si:ch73-173m3.3 si:ch73-173m3.3 425 1.483 - - 0.758 - - 0.725 - - -
89. prkcbp1l ENSDARG00000011932 2714 1.479 0.741 - - - - - 0.738 - - protein kinase C binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2199]
90. sra1 ENSDARG00000053619 2799 1.476 - - 0.747 - - 0.729 - - - steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
91. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 1.469 - - - - - - 0.731 - 0.738 NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
92. map3k7 ENSDARG00000020469 2845 1.467 - - 0.767 - - - 0.700 - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
93. gstm gstm 4064 1.466 0.730 - - - - 0.736 - - -
94. ppp2r1b ppp2r1b 3469 1.463 - 0.704 - - - - 0.759 - -
95. fbxw5 ENSDARG00000099139 2802 1.462 0.704 - 0.758 - - - - - - F-box and WD repeat domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2571]
96. tmem170a ENSDARG00000056628, ENSDARG00000111549 737 1.462 - - - - - 0.705 - 0.757 - transmembrane protein 170A [Source:ZFIN;Acc:ZDB-GENE-040426-1622]
97. psmd8 ENSDARG00000020454 6645 1.459 - 0.725 - - - - 0.734 - - proteasome 26S subunit, non-ATPase 8 [Source:ZFIN;Acc:ZDB-GENE-040625-136]
98. mdm4 ENSDARG00000057513 1954 1.459 - - 0.724 - - 0.735 - - - MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
99. denr ENSDARG00000037229 8370 1.459 - - - - - - 0.758 - 0.701 density-regulated protein [Source:ZFIN;Acc:ZDB-GENE-040718-450]
100. mibp2 ENSDARG00000101844 17444 1.458 0.722 - - - - - - - 0.736 muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]

There are 1686 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA