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Results for mrpl28

Gene Name Gene ID Reads Annotation
mrpl28 ENSDARG00000057805, ENSDARG00000109307, ENSDARG00000115867 1325 mitochondrial ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-050522-113]










Genes with expression patterns similar to mrpl28

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mrpl28 ENSDARG00000057805, ENSDARG00000109307, ENSDARG00000115867 1325 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-050522-113]
2. trap1 ENSDARG00000024317, ENSDARG00000114173 2189 2.338 - 0.734 - - - 0.744 0.860 - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
3. jph1a ENSDARG00000058603 2852 1.673 - 0.800 - - - - 0.873 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
4. akap6 ENSDARG00000077295 1382 1.638 - 0.810 - - - - 0.828 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
5. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.628 - 0.780 - - - - 0.848 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
6. PTPLA PTPLA 4044 1.622 - 0.775 - - - - 0.847 - -
7. sptb ENSDARG00000030490 7128 1.608 - 0.785 - - - - 0.823 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
8. slc37a4b ENSDARG00000077180, ENSDARG00000093531 565 1.604 - 0.728 - - - - 0.876 - - solute carrier family 37 (glucose-6-phosphate transporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-827]
9. PARL 2511 1.602 - 0.847 - - - 0.755 - - - presenilin associated rhomboid like
10. lrpprc ENSDARG00000043970 3847 1.601 - 0.782 - - - - 0.819 - - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
11. cd248b ENSDARG00000077938 2561 1.601 - 0.723 - - - - 0.878 - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
12. serpinf1 ENSDARG00000069048 2083 1.601 - 0.806 - - - - 0.795 - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
13. txlnbb ENSDARG00000076241 6396 1.596 - 0.731 - - - - 0.865 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
14. slc43a1b ENSDARG00000037748 1406 1.595 - 0.754 - - - - 0.841 - - solute carrier family 43 (amino acid system L transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070209-173]
15. fbxw5 ENSDARG00000099139 2802 1.593 - 0.708 - - - - 0.885 - - F-box and WD repeat domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2571]
16. TRIM63 TRIM63 1600 1.59 - 0.777 - - - - 0.813 - -
17. usp28 ENSDARG00000008880 1850 1.579 - 0.710 - - - - 0.869 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
18. mrpl16 ENSDARG00000075325 592 1.579 - 0.836 - - - - 0.743 - - mitochondrial ribosomal protein L16 [Source:ZFIN;Acc:ZDB-GENE-041122-1]
19. sh3bgr ENSDARG00000021633 3498 1.576 - 0.732 - - - - 0.844 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
20. ubr5 ENSDARG00000018192 9267 1.573 0.783 0.790 - - - - - - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
21. limch1a ENSDARG00000074275 2981 1.572 - 0.735 - - - - 0.837 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
22. ahsa1 ahsa1 2012 1.572 - - - 0.714 - - 0.858 - -
23. si:ch1073-325m22.2 ENSDARG00000095921 8534 1.572 - - - - - 0.777 0.795 - - si:ch1073-325m22.2 [Source:NCBI gene;Acc:100333135]
24. mlf1 ENSDARG00000077301 789 1.568 - 0.741 - - - - 0.827 - - myeloid leukemia factor 1 [Source:ZFIN;Acc:ZDB-GENE-080917-7]
25. myoz2b ENSDARG00000037266 2139 1.565 - 0.779 - - - - 0.786 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
26. alpk3a ENSDARG00000078989 1992 1.564 - 0.756 - - - - 0.808 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
27. ATP5J_2 ATP5J_2 2381 1.563 - 0.751 - - - - 0.812 - -
28. DNAJA4 ENSDARG00000051762 5657 1.558 - 0.708 - - - - 0.850 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
29. chrnd ENSDARG00000019342 2728 1.557 - 0.724 - - - - 0.833 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
30. srl ENSDARG00000104587 11126 1.556 - 0.741 - - - - 0.815 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
31. nars ENSDARG00000061100 2948 1.552 - 0.807 - - - - 0.745 - - asparaginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-1016]
32. mrps9 ENSDARG00000061505 1636 1.551 - 0.794 - - - - 0.757 - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
33. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 1.546 - 0.730 - - - - 0.816 - - aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]
34. vwde ENSDARG00000103443 5758 1.544 - 0.799 - - - - 0.745 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
35. nudt3a ENSDARG00000016256 2713 1.543 - 0.756 - - - - 0.787 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
36. alg3 ENSDARG00000053155 1843 1.54 - 0.707 - - - - 0.833 - - asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-050522-334]
37. pygmb ENSDARG00000013317 5454 1.54 - 0.721 - - - - 0.819 - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
38. setd3 ENSDARG00000016513 1507 1.536 - 0.781 - - - - 0.755 - - SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
39. dyrk2 ENSDARG00000094646 2163 1.534 - 0.728 - - - - 0.806 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
40. obsl1b ENSDARG00000077388 2511 1.533 - 0.759 - - - - 0.774 - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
41. cacng1 cacng1 3118 1.531 - 0.719 - - - - 0.812 - -
42. tnnc1b ENSDARG00000037539 13945 1.527 - 0.734 - - - - 0.793 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
43. hhatla ENSDARG00000039051 6598 1.524 - 0.717 - - - - 0.807 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
44. pygma ENSDARG00000055518 15972 1.524 - 0.718 - - - - 0.806 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
45. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.524 - 0.702 - - - - 0.822 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
46. uqcrc2a ENSDARG00000014794 3949 1.517 - 0.719 - - - - 0.798 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
47. tsfm ENSDARG00000060748, ENSDARG00000110047 1003 1.516 - 0.803 - - - - 0.713 - - Ts translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061215-17]
48. DUSP27 ENSDARG00000099889 1197 1.514 - 0.790 - - - - 0.724 - - dual specificity phosphatase 27 [Source:ZFIN;Acc:ZDB-GENE-140513-1]
49. cyp4t8 ENSDARG00000004964, ENSDARG00000116412 1111 1.509 - 0.737 - - - - 0.772 - - cytochrome P450, family 4, subfamily T, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-031219-3]
50. COL23A1_1 COL23A1_1 720 1.508 - 0.714 - - - - 0.794 - -
51. txn2 ENSDARG00000034777 4071 1.5 - 0.705 - - - - 0.795 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
52. pomp ENSDARG00000032296 4439 1.497 - 0.762 - - - - 0.735 - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
53. par1 par1 564 1.495 - - - - - 0.718 0.777 - -
54. AEBP1 ENSDARG00000091726 1431 1.495 - 0.772 - - - - 0.723 - - AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
55. mir133b_1 671 1.493 - 0.770 - - - - 0.723 - - microRNA 133b
56. stac3 ENSDARG00000098883 1765 1.489 - 0.702 - - - - 0.787 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
57. THOP1 ENSDARG00000013776 2717 1.488 - 0.754 - - - - 0.734 - - thimet oligopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-47]
58. ddx49 ENSDARG00000012899 1604 1.486 - 0.735 - - - - 0.751 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
59. zgc:66479 ENSDARG00000008732 3347 1.484 - 0.743 - - - - 0.741 - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
60. mccc1 ENSDARG00000102538, ENSDARG00000115996 2069 1.482 - - - - - 0.731 0.751 - - methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-050208-450]
61. farsa ENSDARG00000098825 2813 1.479 - 0.725 - - - - 0.754 - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
62. larp4aa ENSDARG00000078401 2526 1.477 - 0.743 - - - - 0.734 - - La ribonucleoprotein domain family, member 4Aa [Source:ZFIN;Acc:ZDB-GENE-090313-50]
63. cpt1b ENSDARG00000058285 288 1.47 - - - - - 0.741 0.729 - - carnitine palmitoyltransferase 1B (muscle) [Source:ZFIN;Acc:ZDB-GENE-041010-9]
64. akap1b ENSDARG00000006062 4214 1.467 - 0.734 - - - 0.733 - - - A kinase (PRKA) anchor protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6844]
65. mrps16 ENSDARG00000098972, ENSDARG00000115452 2085 1.462 - 0.700 - - - - 0.762 - - mitochondrial ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-041010-123]
66. smarcc1b ENSDARG00000098919 770 1.46 0.714 - - - - 0.746 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b [Source:ZFIN;Acc:ZDB-GENE-060503-273]
67. srp14 ENSDARG00000115987 3575 1.46 - - - - - 0.749 0.711 - - signal recognition particle 14 [Source:ZFIN;Acc:ZDB-GENE-050913-131]
68. CR392006.1 CR392006.1 1401 1.459 - 0.727 - - - - 0.732 - -
69. fastkd2 ENSDARG00000074031 748 1.457 - 0.720 - - - - 0.737 - - FAST kinase domains 2 [Source:ZFIN;Acc:ZDB-GENE-090313-7]
70. oxct1a ENSDARG00000013063 1517 1.455 - - - - - 0.740 0.715 - - 3-oxoacid CoA transferase 1a [Source:ZFIN;Acc:ZDB-GENE-040723-3]
71. PTP4A3 ENSDARG00000039997 3814 1.452 - 0.721 - - - - 0.731 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
72. entpd5b ENSDARG00000093659 450 1.451 - 0.721 - - - - 0.730 - - ectonucleoside triphosphate diphosphohydrolase 5b [Source:ZFIN;Acc:ZDB-GENE-091118-88]
73. KIAA0355 3250 1.448 - - - - - 0.725 0.723 - - KIAA0355 ortholog, transcript variant X1
74. ndufab1b ENSDARG00000014915 12796 1.448 - 0.712 - - - - 0.736 - - NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
75. cep85l ENSDARG00000020777 1121 1.444 - 0.702 - - - - 0.742 - - centrosomal protein 85, like [Source:ZFIN;Acc:ZDB-GENE-041014-309]
76. dhx37 ENSDARG00000062612 488 1.439 - - - - - 0.713 0.726 - - DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Source:ZFIN;Acc:ZDB-GENE-030131-4505]
77. mef2cb ENSDARG00000009418 1124 1.436 - 0.727 - - - - 0.709 - - myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
78. nav3 ENSDARG00000005476 1012 1.429 - 0.709 - - - - 0.720 - - neuron navigator 3 [Source:ZFIN;Acc:ZDB-GENE-021205-1]
79. FP236812.4 FP236812.4 1244 1.426 - 0.700 - - - - 0.726 - -
80. capslb ENSDARG00000003414 77 1.409 - 0.707 - - - 0.702 - - - calcyphosine-like b [Source:ZFIN;Acc:ZDB-GENE-050417-298]
81. ms4a17a.14 829 0.926 - - - - - - 0.926 - - membrane-spanning 4-domains, subfamily A, member 17A.14
82. nap1l4a ENSDARG00000070560, ENSDARG00000113907 4244 0.922 - - - - - - 0.922 - - nucleosome assembly protein 1-like 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9099]
83. pcmt ENSDARG00000015201 5132 0.922 - - - - - - 0.922 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
84. ntmt1 ENSDARG00000022399 5779 0.915 - - - - - - 0.915 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
85. mrpl39 ENSDARG00000041570 594 0.907 - 0.907 - - - - - - - mitochondrial ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-030131-6520]
86. ndufa9 ndufa9 8846 0.902 - - - - - - 0.902 - -
87. mdh2 ENSDARG00000043371 14485 0.902 - - - - - - 0.902 - - malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
88. fitm1 ENSDARG00000056464 1759 0.898 - - - - - - 0.898 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
89. PTGES3L PTGES3L 4801 0.892 - - - - - - 0.892 - -
90. CHCHD3 CHCHD3 1425 0.892 - - - - - - 0.892 - -
91. timm8b ENSDARG00000055708 7291 0.892 - - - - - - 0.892 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
92. col11a1b ENSDARG00000009014 9998 0.892 - - - - - - 0.892 - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
93. znf106a ENSDARG00000016651 6049 0.89 - - - - - - 0.890 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
94. alpk2 ENSDARG00000079637 1483 0.889 - - - - - - 0.889 - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
95. chrnb1 ENSDARG00000069660, ENSDARG00000112115, ENSDARG00000113395 1438 0.889 - - - - - - 0.889 - - cholinergic receptor, nicotinic, beta 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-070821-4]
96. ccdc12 ENSDARG00000023003, ENSDARG00000113770 1731 0.889 - 0.889 - - - - - - - coiled-coil domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-040801-108]
97. adss ENSDARG00000002071 5497 0.888 - - - - - - 0.888 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
98. sgcd ENSDARG00000098573 4980 0.888 - - - - - - 0.888 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
99. hspb8 ENSDARG00000058365, ENSDARG00000109236 8688 0.887 - - - - - - 0.887 - - heat shock protein b8 [Source:ZFIN;Acc:ZDB-GENE-030131-2480]
100. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 0.885 - - - - - - 0.885 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]

There are 936 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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