Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mrpl23

Gene Name Gene ID Reads Annotation
mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]










Genes with expression patterns similar to mrpl23

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
2. mcm4 ENSDARG00000040041 7971 2.501 - 0.918 - - - - 0.808 - 0.775 minichromosome maintenance complex component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9544]
3. cnbpb ENSDARG00000070922 14606 2.4 0.705 0.963 - - - 0.732 - - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
4. cox6b2 ENSDARG00000037860 33134 2.369 0.723 - - - - 0.850 0.796 - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
5. xrcc5_1 ENSDARG00000099298 1533 2.312 - - - - - - 0.729 0.736 0.847 X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
6. ssbp1 ENSDARG00000039350 809 2.276 0.795 - - - - - 0.722 0.759 - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
7. gstm gstm 4064 2.26 0.726 - - - - 0.776 - 0.758 -
8. nop16 ENSDARG00000044402 3645 2.196 0.730 - - - - - 0.718 - 0.748 NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
9. ndufa7 ENSDARG00000036684 6051 1.863 - 0.998 0.865 - - - - - - NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
10. SERP1 ENSDARG00000076223 2528 1.754 - 0.998 - - - - 0.756 - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
11. me3 ENSDARG00000002305 3305 1.734 - 0.998 - - - 0.736 - - - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
12. rmi1 ENSDARG00000041376 674 1.734 - 0.997 - - 0.737 - - - - RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
13. ARID3C ENSDARG00000067729, ENSDARG00000114447 8069 1.728 - 0.879 0.849 - - - - - - AT rich interactive domain 3C (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-060526-12]
14. stag1b ENSDARG00000062137 1814 1.725 0.728 0.997 - - - - - - - stromal antigen 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1393]
15. riok3 ENSDARG00000042751 3163 1.719 0.721 0.998 - - - - - - - RIO kinase 3 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-133]
16. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.714 - 0.997 - - - - - - 0.717 N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
17. psmd13 ENSDARG00000016239 4229 1.71 0.715 0.995 - - - - - - - proteasome 26S subunit, non-ATPase 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1004]
18. cox7c ENSDARG00000104537 12169 1.709 - 0.989 - - - - 0.720 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
19. zgc:92518 ENSDARG00000016343 3837 1.69 0.743 0.947 - - - - - - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
20. ralba ENSDARG00000040778 1574 1.686 - - 0.887 - - - 0.799 - - v-ral simian leukemia viral oncogene homolog Ba (ras related) [Source:ZFIN;Acc:ZDB-GENE-040801-267]
21. hdac4 ENSDARG00000098349 1370 1.657 - - 0.883 - 0.774 - - - - histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
22. tbc1d12a ENSDARG00000038237 698 1.653 - - 0.876 - - - - - 0.777 TBC1 domain family, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3920]
23. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.653 - - - - - - - 0.795 0.858 eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
24. CABZ01008011.1 CABZ01008011.1 761 1.642 - - 0.886 - - - - - 0.756
25. yif1a ENSDARG00000019636 2215 1.641 - - 0.885 - - - - - 0.756 Yip1 interacting factor homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6922]
26. FBXW7 ENSDARG00000060994 1675 1.633 - - 0.890 - - - - - 0.743 F-box and WD repeat domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-090313-79]
27. hibadhb ENSDARG00000007959 4858 1.63 - 0.879 - - - - 0.751 - - 3-hydroxyisobutyrate dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-1582]
28. dnajc10 ENSDARG00000074727 1523 1.627 - - 0.880 - - - - - 0.747 DnaJ (Hsp40) homolog, subfamily C, member 10 [Source:ZFIN;Acc:ZDB-GENE-070327-1]
29. dnajc7_1 ENSDARG00000058148 687 1.622 - - - - - - 0.850 0.772 - DnaJ (Hsp40) homolog, subfamily C, member 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2483]
30. MAP4_1 MAP4_1 1153 1.614 - - 0.881 - - - - - 0.733
31. epn2 ENSDARG00000008377 5458 1.613 - - 0.859 - - - - - 0.754 epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
32. cwc25 ENSDARG00000003382 2134 1.611 - - 0.866 - - - - 0.745 - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
33. mrps23 ENSDARG00000033973 2265 1.61 - - 0.866 - - - 0.744 - - mitochondrial ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-040801-134]
34. NDUFC2 ENSDARG00000102115 7848 1.595 0.781 - 0.814 - - - - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:ZFIN;Acc:ZDB-GENE-050320-87]
35. zgc:77086 ENSDARG00000014015 4908 1.594 0.735 - 0.859 - - - - - - zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
36. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.591 - - - - - - - 0.801 0.790 ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
37. cox6c ENSDARG00000038577 16845 1.591 - - 0.881 - - 0.710 - - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
38. CCDC86 CCDC86 2023 1.587 0.707 - 0.880 - - - - - -
39. abcg2c ENSDARG00000058574 1261 1.583 - - 0.879 - - - - - 0.704 ATP-binding cassette, sub-family G (WHITE), member 2c [Source:ZFIN;Acc:ZDB-GENE-050517-37]
40. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 1.576 - 0.873 - - - - 0.703 - - nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
41. kras ENSDARG00000010844 2885 1.575 - - 0.853 - - - 0.722 - - v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040808-67]
42. PSIP1 PSIP1 5252 1.575 0.742 - 0.833 - - - - - -
43. mrps25 ENSDARG00000041306 3654 1.573 - - - - - - 0.748 - 0.825 mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
44. nsa2 ENSDARG00000007708 6329 1.566 - - 0.834 - - - - - 0.732 NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-488]
45. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.562 - - - - - - 0.780 0.782 - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
46. wdr43 ENSDARG00000077264 1992 1.562 - - - - - - 0.779 - 0.783 WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
47. eef1db ENSDARG00000030053 5185 1.561 - - - - - 0.851 0.710 - - eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-030131-6544]
48. ddx21 ENSDARG00000063626 6695 1.556 0.796 - - - - - 0.760 - - DEAD (Asp-Glu-Ala-Asp) box helicase 21 [Source:ZFIN;Acc:ZDB-GENE-031113-10]
49. cct6a ENSDARG00000021252 33641 1.556 - 0.810 - - - 0.746 - - - chaperonin containing TCP1, subunit 6A (zeta 1) [Source:ZFIN;Acc:ZDB-GENE-011018-2]
50. rplp0 ENSDARG00000051783 88740 1.542 0.772 0.770 - - - - - - - ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
51. znf740 znf740 2458 1.535 0.722 - - - - - - 0.813 -
52. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.534 0.746 - - - - - 0.788 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
53. rps27.1 ENSDARG00000023298 86382 1.533 0.701 0.832 - - - - - - - ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
54. pelo ENSDARG00000055477 1927 1.53 - - - - - - - 0.727 0.803 pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
55. timm23 timm23 2712 1.528 0.747 - - - - - - - 0.781
56. mycb ENSDARG00000007241 3988 1.525 0.739 - - - - - - - 0.786 MYC proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-780]
57. slc25a39 ENSDARG00000007449 630 1.524 - - - - - - - 0.768 0.756 solute carrier family 25, member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]
58. zeb1b ENSDARG00000013207, ENSDARG00000113922 2571 1.521 0.794 - - - - - 0.727 - - zinc finger E-box binding homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010621-1]
59. prmt1 ENSDARG00000010246 11311 1.521 0.800 - - - - - - 0.721 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
60. cdca5 ENSDARG00000044437 2041 1.517 - - - - 0.760 - - 0.757 - cell division cycle associated 5 [Source:ZFIN;Acc:ZDB-GENE-030131-235]
61. tspan9b ENSDARG00000045706, ENSDARG00000110620, ENSDARG00000111048 2161 1.516 0.733 - - - - - 0.783 - - tetraspanin 9b [Source:ZFIN;Acc:ZDB-GENE-040704-25]
62. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.515 0.741 - - - - - - - 0.774 discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
63. rac2 ENSDARG00000038010 5837 1.513 - - 0.805 - - - - - 0.708 Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
64. ubap2l ENSDARG00000063219 1147 1.512 - - - - 0.762 - - - 0.750 ubiquitin associated protein 2-like [Source:ZFIN;Acc:ZDB-GENE-060503-244]
65. tradd ENSDARG00000036057, ENSDARG00000117083 1583 1.508 - - - - - - - 0.762 0.746 tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
66. C1QBP ENSDARG00000039887 11186 1.506 0.792 - - - - - 0.714 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
67. mrpl54 ENSDARG00000071468 2715 1.502 0.784 - - - - - 0.718 - - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
68. gpia ENSDARG00000012987 4624 1.5 0.706 - - - - 0.794 - - - glucose-6-phosphate isomerase a [Source:ZFIN;Acc:ZDB-GENE-020513-2]
69. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 1.5 0.778 - - - - - 0.722 - - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
70. tufm ENSDARG00000104173 9292 1.496 0.776 - - - - - 0.720 - - Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
71. rlbp1a ENSDARG00000012504 111 1.493 - - - - 0.717 - - 0.776 - retinaldehyde binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1662]
72. pfdn4 ENSDARG00000061228 8266 1.493 - - - - - 0.790 0.703 - - prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
73. ptp4a3 ENSDARG00000039997 1964 1.493 0.764 - - - - 0.729 - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
74. cox6b1 ENSDARG00000045230 1819 1.486 - - - - - 0.719 0.767 - - cytochrome c oxidase subunit 6B1 [Source:ZFIN;Acc:ZDB-GENE-040718-448]
75. zgc:65772 zgc:65772 2092 1.486 0.720 - - - - - - - 0.766
76. cul5a ENSDARG00000069742, ENSDARG00000112542, ENSDARG00000116292 955 1.485 - - - - - - 0.749 0.736 - cullin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-5426]
77. hmgb3b ENSDARG00000006408 3442 1.484 0.761 - - - - - 0.723 - - high mobility group box 3b [Source:ZFIN;Acc:ZDB-GENE-050417-290]
78. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 1.483 - - - - - - - 0.716 0.767 serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
79. hsf2 ENSDARG00000053097 1188 1.483 0.726 - - - - - - 0.757 - heat shock transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-011128-1]
80. atp6v1c1a ENSDARG00000023967 4611 1.477 - - - - - - 0.704 - 0.773 ATPase H+ transporting V1 subunit C1a [Source:ZFIN;Acc:ZDB-GENE-030616-612]
81. imp4 ENSDARG00000054540 1396 1.474 0.719 - - - - - - - 0.755 IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-474]
82. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.467 0.722 - - - - - - - 0.745 ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
83. mrps26 ENSDARG00000039719, ENSDARG00000117175 1514 1.467 - - - - - 0.706 0.761 - - mitochondrial ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-040718-115]
84. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.466 0.736 - - - - - 0.730 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
85. ndufb9 ENSDARG00000041314, ENSDARG00000112557 15434 1.464 0.732 - - - - 0.732 - - - NADH:ubiquinone oxidoreductase subunit B9 [Source:ZFIN;Acc:ZDB-GENE-030131-8364]
86. rpl7l1 ENSDARG00000042864 3256 1.463 0.735 - - - - - - 0.728 - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
87. kpna4 ENSDARG00000023190 2505 1.463 0.716 - - - - - - 0.747 - karyopherin alpha 4 (importin alpha 3) [Source:ZFIN;Acc:ZDB-GENE-030131-5584]
88. pank4 ENSDARG00000098453, ENSDARG00000114951 662 1.459 - - - - - - - 0.722 0.737 pantothenate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1592]
89. mrps6 ENSDARG00000039543 1892 1.454 0.724 - - - - - 0.730 - - mitochondrial ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-060825-59]
90. RPS17L RPS17L 51105 1.449 - 0.714 - - - 0.735 - - -
91. NAT16 ENSDARG00000086222 4682 1.448 0.721 - - 0.727 - - - - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
92. esd ENSDARG00000019496 3192 1.44 - - - - - - 0.736 - 0.704 esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
93. CCDC167 ENSDARG00000045850 1024 1.439 - - - - - - 0.724 - 0.715 coiled-coil domain containing 167 [Source:ZFIN;Acc:ZDB-GENE-041210-79]
94. dnajc5ga ENSDARG00000041896 1478 1.439 - - - - - - 0.715 0.724 - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a [Source:ZFIN;Acc:ZDB-GENE-030131-1583]
95. uqcrc1 ENSDARG00000052304, ENSDARG00000110068 13973 1.436 0.711 - 0.725 - - - - - - ubiquinol-cytochrome c reductase core protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1792]
96. rfc2 ENSDARG00000014274 1533 1.433 - - - - 0.703 - - 0.730 - replication factor C (activator 1) 2 [Source:ZFIN;Acc:ZDB-GENE-050306-29]
97. cry4 ENSDARG00000011890 980 1.419 - - - - - - 0.700 - 0.719 cryptochrome circadian clock 4 [Source:ZFIN;Acc:ZDB-GENE-010426-7]
98. adrbk2 1037 1.416 - - - - 0.705 - - - 0.711 adrenergic, beta, receptor kinase 2, transcript variant X1
99. ppap2b ppap2b 2900 1.415 - - - - - - 0.704 0.711 -
100. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.408 0.700 - - - - - 0.708 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]

There are 1560 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA