Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mrpl20

Gene Name Gene ID Reads Annotation
mrpl20 ENSDARG00000090462 791 mitochondrial ribosomal protein L20 [Source:ZFIN;Acc:ZDB-GENE-030131-5299]










Genes with expression patterns similar to mrpl20

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mrpl20 ENSDARG00000090462 791 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L20 [Source:ZFIN;Acc:ZDB-GENE-030131-5299]
2. gpr146 ENSDARG00000059610 810 1.753 - 0.815 - 0.938 - - - - - G protein-coupled receptor 146 [Source:ZFIN;Acc:ZDB-GENE-050823-3]
3. CU570681.1 CU570681.1 512 1.747 - - - 0.830 - - - 0.917 -
4. tmie ENSDARG00000069423 305 1.739 - - - 0.940 - - - 0.799 - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
5. nrp2b ENSDARG00000038446 783 1.722 - - - 0.902 - - - 0.820 - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
6. nrg2a ENSDARG00000077818 854 1.713 - - - 0.909 - - - 0.804 - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
7. prkag3b ENSDARG00000000369 1945 1.696 - - - 0.860 - - - 0.836 - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
8. fam203a fam203a 570 1.691 - 0.755 - 0.936 - - - - -
9. C20H1orf112 C20H1orf112 316 1.679 - - - 0.870 - - - 0.809 -
10. C12H10orf71 C12H10orf71 595 1.666 - 0.730 - 0.936 - - - - -
11. tmem161b ENSDARG00000055989 680 1.639 - - - - - - 0.756 0.883 - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
12. fam73a 336 1.625 - - - 0.848 - - 0.777 - - family with sequence similarity 73, member A, transcript variant X1
13. dnajc15 ENSDARG00000038309 1274 1.625 - 0.865 - - - - 0.760 - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
14. BX005410.1 ENSDARG00000115561 373 1.607 - 0.727 - 0.880 - - - - - si:ch211-106j24.1 [Source:NCBI gene;Acc:555478]
15. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.604 - 0.731 - 0.873 - - - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
16. si:ch211-85n16.3 ENSDARG00000096346 1095 1.603 - - - 0.829 - - 0.774 - - si:ch211-85n16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-137]
17. STMN3 ENSDARG00000038465 1009 1.598 - - - 0.859 - - - 0.739 - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
18. gfra2a ENSDARG00000042723 592 1.596 - - - 0.892 - - 0.704 - - GDNF family receptor alpha 2a [Source:ZFIN;Acc:ZDB-GENE-040630-1]
19. ERRFI1 ERRFI1 664 1.595 - 0.705 - 0.890 - - - - -
20. trpm1b ENSDARG00000103476 369 1.589 - - - 0.874 - - 0.715 - - transient receptor potential cation channel, subfamily M, member 1b [Source:ZFIN;Acc:ZDB-GENE-070424-31]
21. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.577 - 0.824 - - - - 0.753 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
22. trim45 ENSDARG00000076781 578 1.574 - - - - - - 0.728 0.846 - tripartite motif containing 45 [Source:ZFIN;Acc:ZDB-GENE-070912-389]
23. BX511021.1 ENSDARG00000073936 647 1.57 - 0.741 - - - - - 0.829 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
24. atf7a ENSDARG00000011298 703 1.549 - 0.749 - - - - - 0.800 - activating transcription factor 7a [Source:ZFIN;Acc:ZDB-GENE-050721-2]
25. bysl ENSDARG00000001057 2621 1.548 - 0.714 - - - - 0.834 - - bystin-like [Source:ZFIN;Acc:ZDB-GENE-040426-1287]
26. VGLL3 ENSDARG00000038305 242 1.541 - 0.703 - 0.838 - - - - - vestigial-like family member 3 [Source:ZFIN;Acc:ZDB-GENE-130530-600]
27. hs2st1a ENSDARG00000099478 864 1.536 - - - 0.789 - - 0.747 - - heparan sulfate 2-O-sulfotransferase 1a [Source:ZFIN;Acc:ZDB-GENE-070112-2312]
28. rchy1 ENSDARG00000016710, ENSDARG00000109668, ENSDARG00000115626 477 1.527 - - - 0.824 - - - 0.703 - ring finger and CHY zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-73]
29. IPP ENSDARG00000075339 194 1.526 - - - - - - 0.732 0.794 - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
30. dnajc7_1 ENSDARG00000058148 687 1.525 - - - 0.825 - - 0.700 - - DnaJ (Hsp40) homolog, subfamily C, member 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2483]
31. timm8b ENSDARG00000055708 7291 1.524 - 0.790 - - - - 0.734 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
32. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 1.52 - 0.710 - - - - - 0.810 - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
33. mtdhb ENSDARG00000004939 1225 1.52 - 0.729 - - - - - 0.791 - metadherin b [Source:ZFIN;Acc:ZDB-GENE-090929-2]
34. lama4 ENSDARG00000020785 1522 1.516 - 0.738 - 0.778 - - - - - laminin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040724-213]
35. cpz ENSDARG00000075521 2356 1.51 - - - 0.763 - - - 0.747 - carboxypeptidase Z [Source:ZFIN;Acc:ZDB-GENE-090313-267]
36. timm10 ENSDARG00000069116 4459 1.506 - - - - - - 0.705 0.801 - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
37. reep3l reep3l 608 1.505 - - - - - - 0.739 0.766 -
38. COX18 ENSDARG00000102463 602 1.501 - - - 0.783 - - 0.718 - - cytochrome c oxidase assembly factor COX18 [Source:ZFIN;Acc:ZDB-GENE-080204-88]
39. sorbs1 ENSDARG00000103435 2297 1.501 - 0.753 - - - - 0.748 - - sorbin and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-168]
40. oxa1l ENSDARG00000069313, ENSDARG00000113799 1687 1.498 - - - - - 0.774 0.724 - - oxidase (cytochrome c) assembly 1-like [Source:ZFIN;Acc:ZDB-GENE-071004-49]
41. sfswap ENSDARG00000005980, ENSDARG00000112551 1022 1.496 - 0.792 - - - - 0.704 - - splicing factor SWAP [Source:ZFIN;Acc:ZDB-GENE-040426-931]
42. epn1 ENSDARG00000010411 725 1.495 - 0.756 - 0.739 - - - - - epsin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2680]
43. flrt3 ENSDARG00000076895 3516 1.493 - 0.713 - - - - 0.780 - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
44. C8H9orf116 C8H9orf116 379 1.491 - - - - - 0.702 0.789 - -
45. rpf2 ENSDARG00000043960 2719 1.485 - - - 0.742 - - 0.743 - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
46. tbc1d32 ENSDARG00000041734 486 1.485 - 0.776 - - - - 0.709 - - TBC1 domain family, member 32 [Source:ZFIN;Acc:ZDB-GENE-061106-5]
47. tiprl ENSDARG00000032353 1045 1.473 - - - - - - 0.714 0.759 - TIP41, TOR signaling pathway regulator-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1611]
48. irx3b ENSDARG00000031138 2538 1.472 - 0.700 - - - - 0.772 - - iroquois homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-030131-525]
49. mrpl38 ENSDARG00000039667 1145 1.471 - 0.764 - - - - 0.707 - - mitochondrial ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-040426-2373]
50. hnmt ENSDARG00000012796 302 1.471 - 0.731 - 0.740 - - - - - histamine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040801-157]
51. nop2 ENSDARG00000043304 2511 1.469 - - - - - 0.730 0.739 - - NOP2 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050309-7]
52. polr1a ENSDARG00000098375 1224 1.467 - 0.722 - - - - 0.745 - - RNA polymerase I subunit A [Source:ZFIN;Acc:ZDB-GENE-030131-5286]
53. ADAMTSL4 ENSDARG00000063407 1045 1.462 - 0.700 - - - - 0.762 - - ADAMTS like 4 [Source:HGNC Symbol;Acc:HGNC:19706]
54. nck2a ENSDARG00000018206 231 1.457 - 0.739 - - - 0.718 - - - NCK adaptor protein 2a [Source:ZFIN;Acc:ZDB-GENE-040426-686]
55. ppan ENSDARG00000022232 983 1.45 - 0.702 - - - - 0.748 - - peter pan homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030114-4]
56. kcnj13 ENSDARG00000043443 700 1.448 - - - - - - 0.736 0.712 - potassium inwardly-rectifying channel, subfamily J, member 13 [Source:ZFIN;Acc:ZDB-GENE-070129-1]
57. ptp4a3 ENSDARG00000039997 1964 1.44 - 0.715 - 0.725 - - - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
58. wdr46_1 ENSDARG00000095879 1291 1.438 - 0.703 - - - - 0.735 - - WD repeat domain 46 [Source:ZFIN;Acc:ZDB-GENE-040426-1264]
59. C1QBP ENSDARG00000039887 11186 1.426 - - - - - - 0.704 0.722 - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
60. arrdc2 ENSDARG00000020761 621 1.419 - - - 0.716 - - - 0.703 - arrestin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7146]
61. arpp21 ENSDARG00000061081 892 1.418 - 0.709 - - - - 0.709 - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
62. CRTC1 47 0.97 - - - 0.970 - - - - - CREB regulated transcription coactivator 1
63. si:dkey-16b10.3 si:dkey-16b10.3 21 0.97 - - - 0.970 - - - - -
64. adam10b ENSDARG00000015502 26 0.97 - - - 0.970 - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
65. si:ch73-239k17.1 si:ch73-239k17.1 44 0.969 - - - 0.969 - - - - -
66. CD53 CD53 108 0.968 - - - 0.968 - - - - -
67. gpr186 ENSDARG00000094860 53 0.968 - - - 0.968 - - - - - G protein-coupled receptor 186 [Source:ZFIN;Acc:ZDB-GENE-060503-489]
68. zgc:92161 ENSDARG00000101749 27 0.968 - - - 0.968 - - - - - zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
69. HELZ2_1 ENSDARG00000012600 53 0.967 - - - 0.967 - - - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
70. FP103003.1 FP103003.1 167 0.966 - - - 0.966 - - - - -
71. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 0.965 - - - 0.965 - - - - - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
72. map3k8 ENSDARG00000061710 76 0.965 - - - 0.965 - - - - - mitogen-activated protein kinase kinase kinase 8 [Source:ZFIN;Acc:ZDB-GENE-100316-8]
73. ugt2a4 ENSDARG00000051940 85 0.964 - - - 0.964 - - - - - UDP glucuronosyltransferase 2 family, polypeptide A4 [Source:ZFIN;Acc:ZDB-GENE-080721-23]
74. CABZ01054965.1 ENSDARG00000090844 74 0.963 - - - 0.963 - - - - - interleukin-1 receptor type 1-like [Source:NCBI gene;Acc:799279]
75. arhgap25 ENSDARG00000061784 112 0.963 - - - 0.963 - - - - - Rho GTPase activating protein 25 [Source:ZFIN;Acc:ZDB-GENE-060526-210]
76. zgc:114046 ENSDARG00000091728 68 0.963 - - - 0.963 - - - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
77. cyp2aa11 ENSDARG00000103456 42 0.96 - - - 0.960 - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 11 [Source:ZFIN;Acc:ZDB-GENE-110114-3]
78. CABZ01021433.1 ENSDARG00000105696 74 0.96 - - - 0.960 - - - - - si:cabz01021433.2 [Source:NCBI gene;Acc:100333857]
79. zgc:154075 ENSDARG00000067630 284 0.96 - - - 0.960 - - - - - zgc:154075 [Source:ZFIN;Acc:ZDB-GENE-060929-910]
80. si:ch211-81a5.8 ENSDARG00000070972 59 0.959 - - - 0.959 - - - - - si:ch211-81a5.8 [Source:ZFIN;Acc:ZDB-GENE-060503-138]
81. si:ch211-133l11.10 ENSDARG00000005626 381 0.959 - - - 0.959 - - - - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
82. ENSDARG00000092971 ENSDARG00000092971 563 0.959 - - - 0.959 - - - - -
83. hs3st1l2 ENSDARG00000035578 279 0.957 - - - 0.957 - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-070202-3]
84. ptprz1b ENSDARG00000020871 435 0.957 - - - 0.957 - - - - - protein tyrosine phosphatase, receptor-type, Z polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-050506-100]
85. ccm2l ENSDARG00000063089 100 0.956 - - - 0.956 - - - - - CCM2 like scaffold protein [Source:ZFIN;Acc:ZDB-GENE-090313-248]
86. cyp2v1 ENSDARG00000018485 694 0.956 - - - 0.956 - - - - - cytochrome P450, family 2, subfamily V, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040912-139]
87. CU928220.1 CU928220.1 146 0.956 - - - 0.956 - - - - -
88. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 0.956 - - - 0.956 - - - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
89. wdfy2 ENSDARG00000040453 406 0.955 - - - 0.955 - - - - - WD repeat and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041111-211]
90. aatka ENSDARG00000078222 218 0.955 - - - 0.955 - - - - - apoptosis-associated tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-100812-4]
91. rassf9 ENSDARG00000074721 448 0.954 - - - 0.954 - - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 [Source:ZFIN;Acc:ZDB-GENE-091204-470]
92. dnajc28 ENSDARG00000018181, ENSDARG00000114383 134 0.953 - - - 0.953 - - - - - DnaJ (Hsp40) homolog, subfamily C, member 28 [Source:ZFIN;Acc:ZDB-GENE-050417-130]
93. ift57 ENSDARG00000021022 288 0.952 - - - 0.952 - - - - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
94. C9H3orf70 C9H3orf70 225 0.951 - - - 0.951 - - - - -
95. CABZ01081897.1 ENSDARG00000110500 253 0.949 - - - 0.949 - - - - -
96. lingo4b ENSDARG00000078527 235 0.948 - - - 0.948 - - - - - leucine rich repeat and Ig domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-091214-3]
97. nfybb ENSDARG00000045611, ENSDARG00000110926 350 0.946 - - - 0.946 - - - - - nuclear transcription factor Y, beta b [Source:ZFIN;Acc:ZDB-GENE-050306-25]
98. CU861664.1 CU861664.1 53 0.945 - - - 0.945 - - - - -
99. cog3 ENSDARG00000101999 646 0.945 - - - 0.945 - - - - - component of oligomeric golgi complex 3 [Source:ZFIN;Acc:ZDB-GENE-050913-26]
100. spop ENSDARG00000100519 177 0.945 - - - 0.945 - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]

There are 1402 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA