Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mrpl13

Gene Name Gene ID Reads Annotation
mrpl13 ENSDARG00000056903 2768 mitochondrial ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-050522-167]










Genes with expression patterns similar to mrpl13

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mrpl13 ENSDARG00000056903 2768 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-050522-167]
2. ddost ENSDARG00000037318 10904 1.904 - 0.909 - - - - 0.995 - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-040426-2147]
3. sdad1 ENSDARG00000105117 2819 1.895 - 0.999 - - - - - - 0.896 SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
4. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.84 - 0.995 - - - - - - 0.845 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
5. tmem209 ENSDARG00000039340 1598 1.805 - 0.999 - - - - - - 0.806 transmembrane protein 209 [Source:ZFIN;Acc:ZDB-GENE-030131-2879]
6. nsun2 ENSDARG00000056665 740 1.693 - - - 0.779 - - - - 0.914 NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
7. dap3 ENSDARG00000078500 2724 1.657 0.745 0.912 - - - - - - - death associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-051129-2]
8. pes ENSDARG00000018902 3286 1.625 0.796 - - - - - - - 0.829 pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
9. mrps2 ENSDARG00000103198 2410 1.597 - - - - - 0.715 - - 0.882 mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
10. naca ENSDARG00000005513 2745 1.543 0.716 - - - - - - - 0.827 nascent polypeptide associated complex subunit alpha [Source:ZFIN;Acc:ZDB-GENE-020423-4]
11. hspe1 ENSDARG00000056167 21636 1.499 - 0.710 - - - - - - 0.789 heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2]
12. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 1.484 - - - - - 0.712 - - 0.772 NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
13. m6pr ENSDARG00000018432 1411 1 - - - - - - 1.000 - - mannose-6-phosphate receptor (cation dependent) [Source:ZFIN;Acc:ZDB-GENE-040426-2285]
14. TUB ENSDARG00000062165, ENSDARG00000111083 871 1 - - - - - - 1.000 - - tubby bipartite transcription factor [Source:ZFIN;Acc:ZDB-GENE-121009-1]
15. shoc2 ENSDARG00000040853, ENSDARG00000112058, ENSDARG00000116564 2264 1 - - - - - - 1.000 - - SHOC2 leucine-rich repeat scaffold protein [Source:ZFIN;Acc:ZDB-GENE-050208-523]
16. cd2bp2 ENSDARG00000027357, ENSDARG00000115040, ENSDARG00000115297 1808 1 - - - - - - 1.000 - - CD2 (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-925]
17. oxr1b ENSDARG00000063310 929 1 - - - - - - 1.000 - - oxidation resistance 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2438]
18. zgc:73340 823 1 - - - - - - 1.000 - - zgc:73340
19. TMEM45A ENSDARG00000070743 1669 1 - - - - - - 1.000 - - transmembrane protein 45a [Source:ZFIN;Acc:ZDB-GENE-050522-34]
20. MAST1_1 MAST1_1 1595 1 - - - - - - 1.000 - -
21. CRELD1 794 1 - - - - - - 1.000 - - cysteine rich with EGF like domains 1
22. mid2 ENSDARG00000034871 1001 1 - - - - - - 1.000 - - midline 2 [Source:ZFIN;Acc:ZDB-GENE-090220-1]
23. spen ENSDARG00000074245, ENSDARG00000116696 3054 1 - - - - - - 1.000 - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
24. myo10 ENSDARG00000017004 2191 1 - - - - - - 1.000 - - myosin X [Source:ZFIN;Acc:ZDB-GENE-070912-277]
25. eif2d ENSDARG00000012929 2624 1 - - - - - - 1.000 - - eukaryotic translation initiation factor 2D [Source:ZFIN;Acc:ZDB-GENE-040426-1226]
26. map3k1 ENSDARG00000098405 3043 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
27. sipa1l2 ENSDARG00000061640 4545 1 - - - - - - 1.000 - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
28. pgam5 ENSDARG00000035608 4044 0.999 - 0.999 - - - - - - - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
29. tuba1c ENSDARG00000055216 8384 0.999 - 0.999 - - - - - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
30. upf3b ENSDARG00000000489, ENSDARG00000116719 2088 0.999 - 0.999 - - - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-040426-1630]
31. dazap1 ENSDARG00000070846, ENSDARG00000114578 525 0.999 - 0.999 - - - - - - - DAZ associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070212-1]
32. dda1 ENSDARG00000076074, ENSDARG00000109308 1993 0.999 - 0.999 - - - - - - - DET1 and DDB1 associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2137]
33. cep44 ENSDARG00000053106 683 0.999 - 0.999 - - - - - - - centrosomal protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-392]
34. CR387996.1 ENSDARG00000097774 3037 0.999 - 0.999 - - - - - - -
35. sh3bp4a ENSDARG00000020000 1049 0.999 - 0.999 - - - - - - - SH3-domain binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-040303-3]
36. samd1a ENSDARG00000102810 1037 0.999 - 0.999 - - - - - - - sterile alpha motif domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061013-517]
37. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.999 - 0.999 - - - - - - - G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
38. dcun1d1 ENSDARG00000099642 2043 0.999 - - - - - - 0.999 - - DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5443]
39. tdh ENSDARG00000002745 5344 0.999 - 0.999 - - - - - - - L-threonine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2379]
40. cxcl12b ENSDARG00000055100, ENSDARG00000113088 4476 0.999 - 0.999 - - - - - - - chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030721-1]
41. nr5a2 ENSDARG00000100940 1488 0.999 - 0.999 - - - - - - - nuclear receptor subfamily 5, group A, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-79]
42. rpl3 ENSDARG00000003599 797 0.999 - 0.999 - - - - - - - ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-1291]
43. arnt2 ENSDARG00000103697 5731 0.999 - 0.999 - - - - - - - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
44. rbfox2 ENSDARG00000052182 6621 0.999 - - - - - - 0.999 - - RNA binding fox-1 homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2464]
45. eif5 ENSDARG00000003681 7986 0.999 - - - - - - 0.999 - - eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
46. slc38a10 ENSDARG00000077081 1691 0.999 - 0.999 - - - - - - - solute carrier family 38, member 10 [Source:ZFIN;Acc:ZDB-GENE-050309-21]
47. socs6b ENSDARG00000015863 1799 0.999 - 0.999 - - - - - - - suppressor of cytokine signaling 6b [Source:ZFIN;Acc:ZDB-GENE-030131-1670]
48. wu:fb12e11 wu:fb12e11 2332 0.999 - - - - - - 0.999 - -
49. mcfd2 ENSDARG00000039757, ENSDARG00000109631, ENSDARG00000116502 1804 0.999 - 0.999 - - - - - - - multiple coagulation factor deficiency 2 [Source:ZFIN;Acc:ZDB-GENE-041010-8]
50. foxo1b ENSDARG00000061549 790 0.999 - 0.999 - - - - - - - forkhead box O1 b [Source:ZFIN;Acc:ZDB-GENE-080425-3]
51. abl1 ENSDARG00000035187 3553 0.999 - 0.999 - - - - - - - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
52. PLEKHG4 ENSDARG00000075964 2860 0.999 - 0.999 - - - - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-4824]
53. ing2 ENSDARG00000104907 1336 0.999 - 0.999 - - - - - - - inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
54. akirin1 ENSDARG00000039969, ENSDARG00000116670 2533 0.999 - 0.999 - - - - - - - akirin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2178]
55. cped1 ENSDARG00000045747 1024 0.999 - 0.999 - - - - - - - cadherin-like and PC-esterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-247]
56. aldh9a1b ENSDARG00000037061 2638 0.999 - - - - - - 0.999 - - aldehyde dehydrogenase 9 family, member A1b [Source:ZFIN;Acc:ZDB-GENE-040120-5]
57. lamb2 ENSDARG00000002084 3265 0.999 - - - - - - 0.999 - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
58. mao ENSDARG00000023712 1448 0.999 - 0.999 - - - - - - - monoamine oxidase [Source:ZFIN;Acc:ZDB-GENE-040329-3]
59. CR381676.2 CR381676.2 1591 0.998 - 0.998 - - - - - - -
60. lum ENSDARG00000045580 5395 0.998 - 0.998 - - - - - - - lumican [Source:ZFIN;Acc:ZDB-GENE-040625-24]
61. psmd14 ENSDARG00000063100 15711 0.998 - - - - - - 0.998 - - proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
62. pdxkb ENSDARG00000036546 721 0.998 - 0.998 - - - - - - - pyridoxal (pyridoxine, vitamin B6) kinase b [Source:ZFIN;Acc:ZDB-GENE-030616-521]
63. mtp_1 3298 0.998 - - - - - - 0.998 - - microsomal triglyceride transfer protein
64. dnajc3 dnajc3 802 0.998 - 0.998 - - - - - - -
65. FP102892.2 FP102892.2 809 0.998 - 0.998 - - - - - - -
66. KLB ENSDARG00000076294 595 0.998 - 0.998 - - - - - - - klotho beta [Source:ZFIN;Acc:ZDB-GENE-110909-4]
67. ppp1cab ENSDARG00000071566 4350 0.998 - 0.998 - - - - - - - protein phosphatase 1, catalytic subunit, alpha isozyme b [Source:ZFIN;Acc:ZDB-GENE-030131-5512]
68. C20H12orf57 C20H12orf57 3325 0.998 - 0.998 - - - - - - -
69. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 0.998 - 0.998 - - - - - - - v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
70. LIMA1 LIMA1 908 0.998 - 0.998 - - - - - - -
71. myh10 ENSDARG00000000103 7522 0.998 - 0.998 - - - - - - - myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
72. calb2b ENSDARG00000036344 2417 0.998 - - - - - - 0.998 - - calbindin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1668]
73. utp23 ENSDARG00000105012 1346 0.998 - 0.998 - - - - - - - UTP23, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-353]
74. sgut1 3470 0.998 - 0.998 - - - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, transcript variant X1
75. ror2 ENSDARG00000076227, ENSDARG00000116710 1498 0.998 - 0.998 - - - - - - - receptor tyrosine kinase-like orphan receptor 2 [Source:ZFIN;Acc:ZDB-GENE-060427-5]
76. pak2a ENSDARG00000068177 8931 0.997 - - - - - - 0.997 - - p21 protein (Cdc42/Rac)-activated kinase 2a [Source:ZFIN;Acc:ZDB-GENE-021011-2]
77. psmb3 ENSDARG00000013938 10744 0.997 - - - - - - 0.997 - - proteasome subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682]
78. TBC1D24 ENSDARG00000069339 1300 0.997 - 0.997 - - - - - - - TBC1 domain family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050809-65]
79. cstf3 ENSDARG00000018904 6111 0.997 - 0.997 - - - - - - - cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
80. hoxc6a ENSDARG00000070343 2839 0.997 - - - - - - 0.997 - - homeobox C6a [Source:ZFIN;Acc:ZDB-GENE-990415-113]
81. tia1l ENSDARG00000026476, ENSDARG00000109827 9378 0.997 - - - - - - 0.997 - - cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]
82. thrap3b ENSDARG00000098228 4396 0.997 - - - - - - 0.997 - - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
83. gnl3l ENSDARG00000020595, ENSDARG00000109309 3582 0.997 - 0.997 - - - - - - - guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]
84. mcm5 ENSDARG00000019507 6407 0.997 - - - - - - 0.997 - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
85. snrpa1 ENSDARG00000024651 3306 0.997 - 0.997 - - - - - - - small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
86. gpt2l ENSDARG00000019541 3397 0.997 - - - - - - 0.997 - - glutamic pyruvate transaminase (alanine aminotransferase) 2, like [Source:ZFIN;Acc:ZDB-GENE-050302-11]
87. ELMO3 ENSDARG00000042126, ENSDARG00000110625 1900 0.997 - 0.997 - - - - - - - engulfment and cell motility 3 [Source:ZFIN;Acc:ZDB-GENE-050309-39]
88. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 0.997 - - - - - - 0.997 - - high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
89. tp63 ENSDARG00000044356, ENSDARG00000113627 5686 0.997 - - - - - - 0.997 - - tumor protein p63 [Source:ZFIN;Acc:ZDB-GENE-030819-1]
90. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 0.997 - 0.997 - - - - - - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
91. elavl1 11672 0.996 - - - - - - 0.996 - - ELAV like RNA binding protein 1, transcript variant X3
92. tomm7 ENSDARG00000067717 4452 0.996 - 0.996 - - - - - - - translocase of outer mitochondrial membrane 7 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060825-115]
93. cox7a2a ENSDARG00000053217 12564 0.995 - - - - - - 0.995 - - cytochrome c oxidase subunit 7A2a [Source:ZFIN;Acc:ZDB-GENE-050522-153]
94. igf2bp3 ENSDARG00000010266 5789 0.995 - 0.995 - - - - - - - insulin-like growth factor 2 mRNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-000308-1]
95. IGFN1 IGFN1 5030 0.995 - - - - - - 0.995 - -
96. srsf5b ENSDARG00000027734 6996 0.995 - 0.995 - - - - - - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
97. nhp2l1b nhp2l1b 3898 0.995 - 0.995 - - - - - - -
98. zgc:92066 ENSDARG00000031776, ENSDARG00000116586 12826 0.995 - - - - - - 0.995 - - zgc:92066 [Source:ZFIN;Acc:ZDB-GENE-040718-72]
99. NAT16 ENSDARG00000086222 4682 0.995 - 0.995 - - - - - - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
100. METTL21C METTL21C 1717 0.995 - 0.995 - - - - - - -

There are 689 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA