Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mrpl1

Gene Name Gene ID Reads Annotation
mrpl1 ENSDARG00000054606, ENSDARG00000114027 1457 mitochondrial ribosomal protein L1 [Source:ZFIN;Acc:ZDB-GENE-060526-311]










Genes with expression patterns similar to mrpl1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mrpl1 ENSDARG00000054606, ENSDARG00000114027 1457 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L1 [Source:ZFIN;Acc:ZDB-GENE-060526-311]
2. CDCA4 ENSDARG00000042319 7918 2.66 - - - - 0.970 0.722 0.968 - - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
3. pdcd10b ENSDARG00000012591 3395 2.439 - - - 0.725 - 0.720 0.994 - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
4. sh3bgrl3 ENSDARG00000098075 3071 1.962 - - - - 0.986 - 0.976 - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
5. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.913 - - - - 0.987 - 0.926 - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
6. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.874 - 0.889 - - - - 0.985 - - small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
7. MAP4K4 ENSDARG00000098670 4665 1.872 - - - - 0.926 - 0.946 - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
8. arid1aa ENSDARG00000101710 3644 1.86 - 0.878 - - - - 0.982 - - AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
9. ttc13 ENSDARG00000063242 1360 1.838 - 0.848 - - 0.990 - - - - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
10. loxl2b ENSDARG00000044074 1919 1.819 - 0.823 - - - - 0.996 - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
11. auh ENSDARG00000042975 1841 1.816 - - - - - 0.836 0.980 - - AU RNA binding protein/enoyl-CoA hydratase [Source:ZFIN;Acc:ZDB-GENE-040801-95]
12. sp8a ENSDARG00000011870 1075 1.798 - 0.810 - - - - 0.988 - - sp8 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-9849]
13. b2ml ENSDARG00000015887 1060 1.788 - 0.805 - - - - 0.983 - - beta-2-microglobulin, like [Source:ZFIN;Acc:ZDB-GENE-040426-2136]
14. calub ENSDARG00000005115 1478 1.774 - 0.778 - - - - 0.996 - - calumenin b [Source:ZFIN;Acc:ZDB-GENE-040426-1251]
15. spry4 ENSDARG00000068732 2091 1.751 - 0.766 - - 0.985 - - - - sprouty homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010803-2]
16. dag1 ENSDARG00000016153 10886 1.751 - - - - 0.777 - 0.974 - - dystroglycan 1 [Source:ZFIN;Acc:ZDB-GENE-021223-1]
17. arfgef2 ENSDARG00000074702 1593 1.747 - - - - 0.987 0.760 - - - ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-090312-50]
18. tmem104 ENSDARG00000088560 859 1.746 - - - 0.749 - - 0.997 - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
19. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 1.745 - - - 0.751 0.994 - - - - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
20. sos2 ENSDARG00000060506 769 1.739 - - - - - 0.746 0.993 - - son of sevenless homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090319-5]
21. suv420h2 2186 1.733 - - - 0.746 0.987 - - - - suppressor of variegation 4-20 homolog 2 (Drosophila)
22. id2a ENSDARG00000055283 7428 1.728 - - - - - 0.752 0.976 - - inhibitor of DNA binding 2a [Source:ZFIN;Acc:ZDB-GENE-020910-1]
23. nsfl1c ENSDARG00000087640 2226 1.723 - 0.733 - - 0.990 - - - - NSFL1 (p97) cofactor (p47) [Source:ZFIN;Acc:ZDB-GENE-041114-160]
24. cdkn1a ENSDARG00000076554 591 1.719 - - - - 0.991 0.728 - - - cyclin-dependent kinase inhibitor 1A [Source:ZFIN;Acc:ZDB-GENE-070705-7]
25. fahd1 ENSDARG00000031657 521 1.716 - 0.724 - - - - 0.992 - - fumarylacetoacetate hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-448]
26. arhgap11a ENSDARG00000100019 1642 1.711 - 0.722 - - 0.989 - - - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
27. clica clica 6206 1.706 - 0.739 - - - - 0.967 - -
28. scyl3 ENSDARG00000027046 643 1.704 - - - 0.712 - - 0.992 - - SCY1-like, kinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2559]
29. atp6v1d ENSDARG00000011175 8331 1.703 - - - - 0.914 - 0.789 - - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
30. eif4a3 ENSDARG00000102978 16162 1.702 - - - - 0.938 - 0.764 - - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
31. lama4 ENSDARG00000020785 1522 1.699 - - - - 0.986 0.713 - - - laminin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040724-213]
32. mgll ENSDARG00000036820 747 1.696 - - - 0.723 - - 0.973 - - monoglyceride lipase [Source:ZFIN;Acc:ZDB-GENE-031006-9]
33. sf3b3_1 ENSDARG00000103553 1191 1.693 - - - - 0.990 0.703 - - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
34. cyr61 ENSDARG00000023062 1213 1.686 - - - 0.705 - - 0.981 - - cysteine-rich, angiogenic inducer, 61 [Source:ZFIN;Acc:ZDB-GENE-040426-3]
35. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 1.686 - 0.702 - - - - 0.984 - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
36. sf1 ENSDARG00000008188 5142 1.682 - - - - 0.945 0.737 - - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
37. rab1a rab1a 14138 1.68 - - - - 0.917 - 0.763 - -
38. acsbg2 ENSDARG00000004094 2445 1.658 - - - 0.700 - - 0.958 - - acyl-CoA synthetase bubblegum family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7099]
39. QPCT ENSDARG00000089717 1383 1.654 - 0.721 - - - - 0.933 - - glutaminyl-peptide cyclotransferase [Source:ZFIN;Acc:ZDB-GENE-130827-1]
40. znf292b ENSDARG00000043973 3791 1.586 - 0.765 - - 0.821 - - - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
41. zdhhc6 ENSDARG00000075721 1494 1.568 - 0.774 - 0.794 - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
42. rhoaa ENSDARG00000026845 6900 1.568 - - - - - 0.704 0.864 - - ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
43. lrrfip2 ENSDARG00000010400 2633 1.56 - 0.834 - 0.726 - - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
44. fam43a ENSDARG00000043009 792 1.554 - 0.728 - - - 0.826 - - - family with sequence similarity 43, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6098]
45. cxxc1 cxxc1 914 1.549 - 0.794 - 0.755 - - - - -
46. C22H6orf89 C22H6orf89 1076 1.547 - 0.712 - - - - 0.835 - -
47. histh1l ENSDARG00000035519 12293 1.529 - - - - - 0.716 0.813 - - histone H1 like [Source:ZFIN;Acc:ZDB-GENE-050417-145]
48. C18H16orf70 C18H16orf70 542 1.526 - 0.762 - - - 0.764 - - -
49. lrig1 ENSDARG00000075625 2027 1.508 - 0.780 - 0.728 - - - - - leucine-rich repeats and immunoglobulin-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-031113-23]
50. rac3b ENSDARG00000020795 1523 1.507 - 0.741 - 0.766 - - - - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
51. psma8 ENSDARG00000010965 8321 1.502 - 0.716 - - - - 0.786 - - proteasome subunit alpha 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2194]
52. mapk14a ENSDARG00000000857, ENSDARG00000112397 1743 1.502 0.763 - - - - 0.739 - - - mitogen-activated protein kinase 14a [Source:ZFIN;Acc:ZDB-GENE-010202-2]
53. gnav1 ENSDARG00000043006 305 1.498 - - - 0.740 - 0.758 - - - guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92]
54. ctdspla ENSDARG00000071673 1447 1.496 - 0.745 - 0.751 - - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
55. PLEKHH3 ENSDARG00000070174 2117 1.495 - 0.770 - - - 0.725 - - - pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
56. PARD3B PARD3B 401 1.494 - 0.767 - 0.727 - - - - -
57. tdrd3 ENSDARG00000025421 633 1.487 - 0.761 - 0.726 - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
58. ppp2r1b ppp2r1b 3469 1.484 - 0.771 - 0.713 - - - - -
59. naa20 ENSDARG00000039493 3572 1.475 - 0.749 - - - - - - 0.726 N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-47]
60. SI:DKEY-209E8.1 SI:DKEY-209E8.1 1143 1.472 - 0.769 - 0.703 - - - - -
61. nup210 ENSDARG00000063333 995 1.471 - - - 0.730 - 0.741 - - - nucleoporin 210 [Source:ZFIN;Acc:ZDB-GENE-050208-132]
62. smc1al ENSDARG00000058203 8838 1.465 - 0.762 - - - 0.703 - - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
63. bbs4 ENSDARG00000063522 247 1.435 - 0.725 - 0.710 - - - - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
64. CABZ01085858.1 CABZ01085858.1 355 1.434 - - - 0.707 - 0.727 - - -
65. echs1 ENSDARG00000001578 3733 1.419 - 0.711 - - 0.708 - - - - enoyl CoA hydratase, short chain, 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-617]
66. pcnxl4 377 1.417 - 0.705 - - - 0.712 - - - pecanex-like 4 (Drosophila), transcript variant X2
67. CABZ01062452.1 CABZ01062452.1 1721 1.417 - 0.706 - 0.711 - - - - -
68. nme6 ENSDARG00000016138 207 1.405 - 0.704 - - - 0.701 - - - NME/NM23 nucleoside diphosphate kinase 6 [Source:ZFIN;Acc:ZDB-GENE-000710-3]
69. fam102ba ENSDARG00000053104 845 0.998 - - - - - - 0.998 - - family with sequence similarity 102, member B, a [Source:ZFIN;Acc:ZDB-GENE-060616-312]
70. slc35b1 ENSDARG00000038213 465 0.997 - - - - - - 0.997 - - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
71. rtdr1 rtdr1 158 0.997 - - - - - - 0.997 - -
72. znf451 ENSDARG00000076939 508 0.997 - - - - - - 0.997 - - zinc finger protein 451 [Source:ZFIN;Acc:ZDB-GENE-081107-14]
73. ncoa6 ENSDARG00000071272 759 0.997 - - - - - - 0.997 - - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
74. ankrd6b ENSDARG00000029370 429 0.997 - - - - - - 0.997 - - ankyrin repeat domain 6b [Source:ZFIN;Acc:ZDB-GENE-030916-4]
75. mapk15 ENSDARG00000100822 157 0.997 - - - - - - 0.997 - - mitogen-activated protein kinase 15 [Source:ZFIN;Acc:ZDB-GENE-050522-307]
76. magixa ENSDARG00000025108 561 0.997 - - - - - - 0.997 - - MAGI family member, X-linked a [Source:ZFIN;Acc:ZDB-GENE-060503-115]
77. nlk1 ENSDARG00000006566 1123 0.997 - - - - - - 0.997 - - nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]
78. CABZ01078431.1 CABZ01078431.1 183 0.997 - - - - - - 0.997 - -
79. ipmkb ENSDARG00000029291 625 0.997 - - - - - - 0.997 - - inositol polyphosphate multikinase b [Source:ZFIN;Acc:ZDB-GENE-061215-5]
80. ino80c ENSDARG00000055719 1512 0.996 - - - - - - 0.996 - - INO80 complex subunit C [Source:ZFIN;Acc:ZDB-GENE-040625-97]
81. rassf1 ENSDARG00000004840 1248 0.996 - - - - - - 0.996 - - Ras association (RalGDS/AF-6) domain family 1 [Source:ZFIN;Acc:ZDB-GENE-040912-14]
82. TPGS1 TPGS1 228 0.996 - - - - - - 0.996 - -
83. rrp7a ENSDARG00000098934 1123 0.996 - - - - - - 0.996 - - ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]
84. ech1 ENSDARG00000012915, ENSDARG00000109720 1409 0.996 - - - - - - 0.996 - - enoyl CoA hydratase 1, peroxisomal [Source:ZFIN;Acc:ZDB-GENE-041010-170]
85. timeless ENSDARG00000078497 1114 0.996 - - - - - - 0.996 - - timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
86. ENSDARG00000078787 ENSDARG00000078787 97 0.996 - - - - - - 0.996 - -
87. CU019646.2 CU019646.2 519 0.996 - - - - - - 0.996 - -
88. trappc3 ENSDARG00000045364 1021 0.996 - - - - - - 0.996 - - trafficking protein particle complex 3 [Source:ZFIN;Acc:ZDB-GENE-040801-120]
89. ppm1ab ENSDARG00000043250 772 0.996 - - - - - - 0.996 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Ab [Source:ZFIN;Acc:ZDB-GENE-991102-14]
90. SLC24A2 ENSDARG00000042988 242 0.996 - - - - - - 0.996 - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-277]
91. lsm12a ENSDARG00000028848, ENSDARG00000115800 3499 0.996 - - - - - - 0.996 - - LSM12 homolog a [Source:ZFIN;Acc:ZDB-GENE-040516-12]
92. ARSB ENSDARG00000108788 774 0.996 - - - - - - 0.996 - - arylsulfatase B [Source:HGNC Symbol;Acc:HGNC:714]
93. IGSF8 ENSDARG00000038467 2102 0.996 - - - - - - 0.996 - - immunoglobulin superfamily, member 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2444]
94. ptk6a ENSDARG00000017947 682 0.996 - - - - - - 0.996 - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
95. tmem198b ENSDARG00000034685, ENSDARG00000111728 639 0.996 - - - - - - 0.996 - - transmembrane protein 198b [Source:ZFIN;Acc:ZDB-GENE-050809-123]
96. AL954146.1 ENSDARG00000038891 114 0.996 - - - - - - 0.996 - - trypsin I-P1-like [Source:NCBI gene;Acc:560023]
97. itsn2a ENSDARG00000000161 115 0.996 - - - - - - 0.996 - - intersectin 2a [Source:ZFIN;Acc:ZDB-GENE-041014-84]
98. C2H6orf52 C2H6orf52 2847 0.996 - - - - - - 0.996 - -
99. CABZ01115256.1 CABZ01115256.1 683 0.996 - - - - - - 0.996 - -
100. cryba1b ENSDARG00000053875 3256 0.996 - - - - - - 0.996 - - crystallin, beta A1b [Source:ZFIN;Acc:ZDB-GENE-040718-326]

There are 1326 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA